RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 KDRP35968 1356 aa23.53■■□□□ 1.36
LAMP1-201ENST00000332556 PSME1Q06323 249 aa23.52■■□□□ 1.36
LAMP1-201ENST00000332556 RPAP2Q8IXW5 612 aaPredicted RBP23.51■■□□□ 1.35
LAMP1-201ENST00000332556 CLCN1P35523 988 aa23.51■■□□□ 1.35
LAMP1-201ENST00000332556 DDIT3P35638 169 aa23.51■■□□□ 1.35
LAMP1-201ENST00000332556 GAS2L3Q86XJ1 694 aa23.51■■□□□ 1.35
LAMP1-201ENST00000332556 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
LAMP1-201ENST00000332556 MPRIPQ6WCQ1 1025 aa23.48■■□□□ 1.35
LAMP1-201ENST00000332556 LRRFIP2Q9Y608 721 aaKnown RBP23.48■■□□□ 1.35
LAMP1-201ENST00000332556 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
LAMP1-201ENST00000332556 HAP1P54257 671 aaPredicted RBP23.47■■□□□ 1.35
LAMP1-201ENST00000332556 HDGFL1Q5TGJ6 251 aa23.46■■□□□ 1.35
LAMP1-201ENST00000332556 TAF7Q15545 349 aaPredicted RBP23.46■■□□□ 1.35
LAMP1-201ENST00000332556 ANKLE2Q86XL3 938 aa23.46■■□□□ 1.35
LAMP1-201ENST00000332556 IL1RAPL2Q9NP60 686 aa23.46■■□□□ 1.35
LAMP1-201ENST00000332556 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
LAMP1-201ENST00000332556 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
LAMP1-201ENST00000332556 SNX21Q969T3 373 aa23.46■■□□□ 1.35
LAMP1-201ENST00000332556 GNAI2P04899 355 aa23.45■■□□□ 1.34
LAMP1-201ENST00000332556 MAP4K4O95819 1239 aaPredicted RBP23.44■■□□□ 1.34
LAMP1-201ENST00000332556 NWD1Q149M9 1564 aa23.44■■□□□ 1.34
LAMP1-201ENST00000332556 CCT4P50991 539 aaKnown RBP23.44■■□□□ 1.34
LAMP1-201ENST00000332556 DDX17Q92841 729 aaKnown RBP23.44■■□□□ 1.34
LAMP1-201ENST00000332556 XRN1Q8IZH2 1706 aaKnown RBP23.43■■□□□ 1.34
LAMP1-201ENST00000332556 AK9Q5TCS8 1911 aa23.43■■□□□ 1.34
LAMP1-201ENST00000332556 KIF24Q5T7B8 1368 aa23.43■■□□□ 1.34
LAMP1-201ENST00000332556 PRAMEF22A3QJZ6 481 aa23.43■■□□□ 1.34
LAMP1-201ENST00000332556 ESPNB1AK53 854 aa23.43■■□□□ 1.34
LAMP1-201ENST00000332556 K7ELQ4 463 aaPredicted RBP23.43■■□□□ 1.34
LAMP1-201ENST00000332556 RAB3GAP1Q15042 981 aa23.43■■□□□ 1.34
LAMP1-201ENST00000332556 SSFA2P28290 1259 aa23.42■■□□□ 1.34
LAMP1-201ENST00000332556 USP26Q9BXU7 913 aa23.42■■□□□ 1.34
LAMP1-201ENST00000332556 RILPL2Q969X0 211 aa23.42■■□□□ 1.34
LAMP1-201ENST00000332556 GBP4Q96PP9 640 aa23.42■■□□□ 1.34
LAMP1-201ENST00000332556 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
LAMP1-201ENST00000332556 PDE1AP54750 535 aa23.41■■□□□ 1.34
LAMP1-201ENST00000332556 NOL8Q76FK4 1167 aaKnown RBP23.41■■□□□ 1.34
LAMP1-201ENST00000332556 CHPF2Q9P2E5 772 aa23.41■■□□□ 1.34
LAMP1-201ENST00000332556 CHAMP1Q96JM3 812 aa23.4■■□□□ 1.34
LAMP1-201ENST00000332556 NUTM1Q86Y26 1132 aa23.4■■□□□ 1.34
LAMP1-201ENST00000332556 USP44Q9H0E7 712 aa23.4■■□□□ 1.34
LAMP1-201ENST00000332556 HMMRO75330 724 aa23.39■■□□□ 1.34
LAMP1-201ENST00000332556 PKP1Q13835 747 aa23.39■■□□□ 1.34
LAMP1-201ENST00000332556 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.34
LAMP1-201ENST00000332556 IP6K1Q92551 441 aa23.39■■□□□ 1.34
LAMP1-201ENST00000332556 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
LAMP1-201ENST00000332556 ZNF530Q6P9A1 599 aaPredicted RBP23.39■■□□□ 1.33
LAMP1-201ENST00000332556 TRIM44Q96DX7 344 aaPredicted RBP23.39■■□□□ 1.33
LAMP1-201ENST00000332556 AXIN2Q9Y2T1 843 aa23.38■■□□□ 1.33
LAMP1-201ENST00000332556 NBPF7P0C2Y1 421 aaPredicted RBP23.37■■□□□ 1.33
LAMP1-201ENST00000332556 FOXD4L5Q5VV16 416 aaPredicted RBP23.37■■□□□ 1.33
LAMP1-201ENST00000332556 FOXD4L4Q8WXT5 416 aaPredicted RBP23.37■■□□□ 1.33
LAMP1-201ENST00000332556 ZC3H6P61129 1189 aaKnown RBP23.37■■□□□ 1.33
LAMP1-201ENST00000332556 CIZ1Q9ULV3 898 aaPredicted RBP23.36■■□□□ 1.33
LAMP1-201ENST00000332556 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
LAMP1-201ENST00000332556 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
LAMP1-201ENST00000332556 ZGPATQ8N5A5 531 aaKnown RBP23.36■■□□□ 1.33
LAMP1-201ENST00000332556 LRRCC1Q9C099 1032 aa23.36■■□□□ 1.33
LAMP1-201ENST00000332556 PI4KAP2A4QPH2 592 aa23.35■■□□□ 1.33
LAMP1-201ENST00000332556 UBTFL1P0CB47 393 aaPredicted RBP23.35■■□□□ 1.33
LAMP1-201ENST00000332556 PI4KAP1Q8N8J0 262 aa23.35■■□□□ 1.33
LAMP1-201ENST00000332556 LTN1O94822 1766 aa23.35■■□□□ 1.33
LAMP1-201ENST00000332556 GCP02774 474 aa23.35■■□□□ 1.33
LAMP1-201ENST00000332556 EIF4A1P60842 406 aaKnown RBP23.34■■□□□ 1.33
LAMP1-201ENST00000332556 PROSER3Q2NL68 480 aa23.34■■□□□ 1.33
LAMP1-201ENST00000332556 IL25Q9H293 177 aa23.34■■□□□ 1.33
LAMP1-201ENST00000332556 BTBD11A6QL63 1104 aa23.34■■□□□ 1.33
LAMP1-201ENST00000332556 TEFQ10587 303 aa23.34■■□□□ 1.33
LAMP1-201ENST00000332556 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
LAMP1-201ENST00000332556 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
LAMP1-201ENST00000332556 PPP1R42Q7Z4L9 355 aa23.33■■□□□ 1.32
LAMP1-201ENST00000332556 MX1P20591 662 aa23.32■■□□□ 1.32
LAMP1-201ENST00000332556 DTNBO60941 627 aa23.32■■□□□ 1.32
LAMP1-201ENST00000332556 SURF6O75683 361 aaKnown RBP23.32■■□□□ 1.32
LAMP1-201ENST00000332556 GNAI3P08754 354 aa23.32■■□□□ 1.32
LAMP1-201ENST00000332556 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
LAMP1-201ENST00000332556 ISY1Q9ULR0 285 aaKnown RBP23.31■■□□□ 1.32
LAMP1-201ENST00000332556 SKOR2Q2VWA4 1001 aaPredicted RBP23.3■■□□□ 1.32
LAMP1-201ENST00000332556 CASC1Q6TDU7 716 aa23.3■■□□□ 1.32
LAMP1-201ENST00000332556 ANKRD24Q8TF21 1146 aa23.3■■□□□ 1.32
LAMP1-201ENST00000332556 PIP4K2AP48426 406 aaPredicted RBP23.29■■□□□ 1.32
LAMP1-201ENST00000332556 AIMP1Q12904 312 aaKnown RBP23.29■■□□□ 1.32
LAMP1-201ENST00000332556 HSP90AA2PQ14568 343 aaPredicted RBP23.29■■□□□ 1.32
LAMP1-201ENST00000332556 CABLES1Q8TDN4 633 aa23.29■■□□□ 1.32
LAMP1-201ENST00000332556 DDX49Q9Y6V7 483 aaKnown RBP23.29■■□□□ 1.32
LAMP1-201ENST00000332556 PXDNQ92626 1479 aa23.29■■□□□ 1.32
LAMP1-201ENST00000332556 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
LAMP1-201ENST00000332556 ERC2O15083 957 aa23.29■■□□□ 1.32
LAMP1-201ENST00000332556 SRGAP3O43295 1099 aa23.29■■□□□ 1.32
LAMP1-201ENST00000332556 ANO2Q9NQ90 1003 aa23.29■■□□□ 1.32
LAMP1-201ENST00000332556 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
LAMP1-201ENST00000332556 SRCIN1Q9C0H9 1055 aa23.28■■□□□ 1.32
LAMP1-201ENST00000332556 RABEP1Q15276 862 aa23.28■■□□□ 1.32
LAMP1-201ENST00000332556 SOS1Q07889 1333 aaPredicted RBP23.28■■□□□ 1.32
LAMP1-201ENST00000332556 CWF19L2Q2TBE0 894 aaKnown RBP23.27■■□□□ 1.32
LAMP1-201ENST00000332556 BAG4O95429 457 aaKnown RBP23.27■■□□□ 1.32
LAMP1-201ENST00000332556 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
LAMP1-201ENST00000332556 NCLP19338 710 aaKnown RBP23.26■■□□□ 1.31
LAMP1-201ENST00000332556 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
LAMP1-201ENST00000332556 SALL3Q9BXA9 1300 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 514.8 ms