RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 USP54Q70EL1 1684 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 DDIT3P35638 169 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 GZF1Q9H116 711 aaPredicted RBP12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
PRAMEF1-201ENST00000332296 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
PRAMEF1-201ENST00000332296 KIF2CQ99661 725 aa12.55□□□□□ -0.4
PRAMEF1-201ENST00000332296 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
PRAMEF1-201ENST00000332296 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
PRAMEF1-201ENST00000332296 CALD1Q05682 793 aaKnown RBP12.54□□□□□ -0.4
PRAMEF1-201ENST00000332296 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
PRAMEF1-201ENST00000332296 SPATA31A3Q5VYP0 1347 aa12.54□□□□□ -0.4
PRAMEF1-201ENST00000332296 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
PRAMEF1-201ENST00000332296 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
PRAMEF1-201ENST00000332296 SNX21Q969T3 373 aa12.53□□□□□ -0.4
PRAMEF1-201ENST00000332296 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
PRAMEF1-201ENST00000332296 FAM43AQ8N2R8 423 aa12.53□□□□□ -0.4
PRAMEF1-201ENST00000332296 LTN1O94822 1766 aa12.53□□□□□ -0.4
PRAMEF1-201ENST00000332296 FSD2A1L4K1 749 aa12.52□□□□□ -0.4
PRAMEF1-201ENST00000332296 TRAK2O60296 914 aa12.52□□□□□ -0.4
PRAMEF1-201ENST00000332296 AEBP1Q8IUX7 1158 aa12.52□□□□□ -0.4
PRAMEF1-201ENST00000332296 PEAK1Q9H792 1746 aa12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 POLA2Q14181 598 aa12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 PANK2Q9BZ23 570 aa12.52□□□□□ -0.41
PRAMEF1-201ENST00000332296 RGS12O14924 1447 aa12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 MAP3K19Q56UN5 1328 aa12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 GCP02774 474 aa12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 GSPT1P15170 499 aaKnown RBP12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
PRAMEF1-201ENST00000332296 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 ZBTB7CA1YPR0 619 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 GOLGA6L3A6NEY3 463 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 NFAT5O94916 1531 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 STK25O00506 426 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 CHMP4BQ9H444 224 aaKnown RBP12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 RRAGDQ9NQL2 400 aaPredicted RBP12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 SLIT3O75094 1523 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 RGPD1P0DJD0 1748 aa12.5□□□□□ -0.41
PRAMEF1-201ENST00000332296 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 AMPHP49418 695 aa12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 TNPO1Q92973 898 aaKnown RBP12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 CRYBG1Q9Y4K1 1723 aa12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 HSP90AB2PQ58FF8 381 aa12.49□□□□□ -0.41
PRAMEF1-201ENST00000332296 DDX11L8A8MPP1 907 aa12.48□□□□□ -0.41
PRAMEF1-201ENST00000332296 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
PRAMEF1-201ENST00000332296 PLEKHM2Q8IWE5 1019 aa12.48□□□□□ -0.41
PRAMEF1-201ENST00000332296 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
PRAMEF1-201ENST00000332296 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
PRAMEF1-201ENST00000332296 CDC45O75419 566 aa12.47□□□□□ -0.41
PRAMEF1-201ENST00000332296 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
PRAMEF1-201ENST00000332296 MCM10Q7L590 875 aa12.47□□□□□ -0.41
PRAMEF1-201ENST00000332296 COL16A1Q07092 1604 aaPredicted RBP12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 FLT4P35916 1363 aa12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 HOXC9P31274 260 aa12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 RGPD5Q99666 1765 aa12.46□□□□□ -0.41
PRAMEF1-201ENST00000332296 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.42
PRAMEF1-201ENST00000332296 INTS3Q68E01 1043 aaKnown RBP12.46□□□□□ -0.42
PRAMEF1-201ENST00000332296 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.42
PRAMEF1-201ENST00000332296 ABCA3Q99758 1704 aa12.46□□□□□ -0.42
PRAMEF1-201ENST00000332296 DCTPP1Q9H773 170 aa12.46□□□□□ -0.42
PRAMEF1-201ENST00000332296 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
PRAMEF1-201ENST00000332296 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
PRAMEF1-201ENST00000332296 TTC22Q5TAA0 569 aa12.45□□□□□ -0.42
PRAMEF1-201ENST00000332296 RTL1A6NKG5 1358 aa12.44□□□□□ -0.42
PRAMEF1-201ENST00000332296 CHL1O00533 1208 aa12.44□□□□□ -0.42
PRAMEF1-201ENST00000332296 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
PRAMEF1-201ENST00000332296 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
PRAMEF1-201ENST00000332296 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
PRAMEF1-201ENST00000332296 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 IP6K1Q92551 441 aa12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 MEIS3Q99687 375 aa12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 GPBP1L1Q9HC44 474 aaPredicted RBP12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 CRB1P82279 1406 aa12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 SSFA2P28290 1259 aa12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 CHRNA2Q15822 529 aa12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
PRAMEF1-201ENST00000332296 APBB1O00213 710 aa12.42□□□□□ -0.42
PRAMEF1-201ENST00000332296 AXIN2Q9Y2T1 843 aa12.42□□□□□ -0.42
PRAMEF1-201ENST00000332296 MRE11P49959 708 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms