RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
KLHDC3-203ENST00000332245 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
KLHDC3-203ENST00000332245 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
KLHDC3-203ENST00000332245 DLG5Q8TDM6 1919 aa20.34■□□□□ 0.85
KLHDC3-203ENST00000332245 ITGB4P16144 1822 aa20.33■□□□□ 0.85
KLHDC3-203ENST00000332245 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
KLHDC3-203ENST00000332245 LGR6Q9HBX8 967 aa20.33■□□□□ 0.85
KLHDC3-203ENST00000332245 SCN11AQ9UI33 1791 aa20.32■□□□□ 0.84
KLHDC3-203ENST00000332245 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
KLHDC3-203ENST00000332245 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
KLHDC3-203ENST00000332245 RUNDC1Q96C34 613 aa20.31■□□□□ 0.84
KLHDC3-203ENST00000332245 HSP90AB1P08238 724 aaKnown RBP20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 SYTL4Q96C24 671 aaPredicted RBP20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 HMGB2P26583 209 aaKnown RBP20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 NFE2L2Q16236 605 aa20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 IL17REQ8NFR9 667 aa20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 DCAF5Q96JK2 942 aa20.3■□□□□ 0.84
KLHDC3-203ENST00000332245 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
KLHDC3-203ENST00000332245 TFCP2L1Q9NZI6 479 aa20.29■□□□□ 0.84
KLHDC3-203ENST00000332245 PNPLA7Q6ZV29 1317 aa20.29■□□□□ 0.84
KLHDC3-203ENST00000332245 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
KLHDC3-203ENST00000332245 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
KLHDC3-203ENST00000332245 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
KLHDC3-203ENST00000332245 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
KLHDC3-203ENST00000332245 SENP3-EIF4A1A0A087X0R7 540 aa20.27■□□□□ 0.84
KLHDC3-203ENST00000332245 NEFMP07197 916 aa20.27■□□□□ 0.84
KLHDC3-203ENST00000332245 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
KLHDC3-203ENST00000332245 PIGBQ92521 554 aa20.27■□□□□ 0.84
KLHDC3-203ENST00000332245 POLD1P28340 1107 aa20.26■□□□□ 0.83
KLHDC3-203ENST00000332245 MRC1P22897 1456 aa20.26■□□□□ 0.83
KLHDC3-203ENST00000332245 CEMIPQ8WUJ3 1361 aa20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 ERVV-2B6SEH9 535 aa20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 APAF1O14727 1248 aa20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 KCNQ4P56696 695 aa20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 MCM10Q7L590 875 aa20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
KLHDC3-203ENST00000332245 RIPK4P57078 832 aa20.24■□□□□ 0.83
KLHDC3-203ENST00000332245 SIPA1L3O60292 1781 aaPredicted RBP20.24■□□□□ 0.83
KLHDC3-203ENST00000332245 UTRNP46939 3433 aa20.24■□□□□ 0.83
KLHDC3-203ENST00000332245 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
KLHDC3-203ENST00000332245 NFATC2IPQ8NCF5 419 aa20.24■□□□□ 0.83
KLHDC3-203ENST00000332245 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
KLHDC3-203ENST00000332245 HTATSF1O43719 755 aaKnown RBP20.23■□□□□ 0.83
KLHDC3-203ENST00000332245 NEUROD2Q15784 382 aa20.23■□□□□ 0.83
KLHDC3-203ENST00000332245 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
KLHDC3-203ENST00000332245 SLC52A2Q9HAB3 445 aa20.22■□□□□ 0.83
KLHDC3-203ENST00000332245 LY75O60449 1722 aa20.22■□□□□ 0.83
KLHDC3-203ENST00000332245 COL24A1Q17RW2 1714 aa20.22■□□□□ 0.83
KLHDC3-203ENST00000332245 CABP4P57796 275 aa20.21■□□□□ 0.83
KLHDC3-203ENST00000332245 TMOD3Q9NYL9 352 aa20.21■□□□□ 0.83
KLHDC3-203ENST00000332245 ASAP1Q9ULH1 1129 aa20.21■□□□□ 0.83
KLHDC3-203ENST00000332245 GPR162Q16538 588 aa20.19■□□□□ 0.82
KLHDC3-203ENST00000332245 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
KLHDC3-203ENST00000332245 COL23A1Q86Y22 540 aaPredicted RBP20.18■□□□□ 0.82
KLHDC3-203ENST00000332245 FLAD1Q8NFF5 587 aa20.18■□□□□ 0.82
KLHDC3-203ENST00000332245 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
KLHDC3-203ENST00000332245 SMARCC1Q92922 1105 aaPredicted RBP20.17■□□□□ 0.82
KLHDC3-203ENST00000332245 CHD4Q14839 1912 aa20.16■□□□□ 0.82
KLHDC3-203ENST00000332245 SLC39A6Q13433 755 aa20.16■□□□□ 0.82
KLHDC3-203ENST00000332245 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
KLHDC3-203ENST00000332245 PALLDQ8WX93 1383 aa20.14■□□□□ 0.82
KLHDC3-203ENST00000332245 KCNQ3O43525 872 aa20.14■□□□□ 0.81
KLHDC3-203ENST00000332245 TEFQ10587 303 aa20.14■□□□□ 0.81
KLHDC3-203ENST00000332245 SLC4A9Q96Q91 983 aa20.14■□□□□ 0.81
KLHDC3-203ENST00000332245 MSH5O43196 834 aa20.13■□□□□ 0.81
KLHDC3-203ENST00000332245 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
KLHDC3-203ENST00000332245 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
KLHDC3-203ENST00000332245 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
KLHDC3-203ENST00000332245 LMOD3Q0VAK6 560 aa20.12■□□□□ 0.81
KLHDC3-203ENST00000332245 KLHL34Q8N239 644 aa20.12■□□□□ 0.81
KLHDC3-203ENST00000332245 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
KLHDC3-203ENST00000332245 TUBGCP6Q96RT7 1819 aa20.12■□□□□ 0.81
KLHDC3-203ENST00000332245 GRIN3BO60391 1043 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 TAF7Q15545 349 aaPredicted RBP20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 CD2APQ9Y5K6 639 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
KLHDC3-203ENST00000332245 ZNF790Q6PG37 636 aa20.09■□□□□ 0.81
KLHDC3-203ENST00000332245 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
KLHDC3-203ENST00000332245 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
KLHDC3-203ENST00000332245 SIK1P57059 783 aa20.08■□□□□ 0.81
KLHDC3-203ENST00000332245 ITPK1Q13572 414 aa20.08■□□□□ 0.81
KLHDC3-203ENST00000332245 NGEFQ8N5V2 710 aa20.08■□□□□ 0.81
KLHDC3-203ENST00000332245 TAF1LQ8IZX4 1826 aa20.08■□□□□ 0.8
KLHDC3-203ENST00000332245 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
KLHDC3-203ENST00000332245 TJP1Q07157 1748 aa20.07■□□□□ 0.8
KLHDC3-203ENST00000332245 ZNF853P0CG23 659 aa20.06■□□□□ 0.8
KLHDC3-203ENST00000332245 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
KLHDC3-203ENST00000332245 ZNF496Q96IT1 587 aaPredicted RBP20.06■□□□□ 0.8
KLHDC3-203ENST00000332245 RBM42Q9BTD8 480 aaKnown RBP20.06■□□□□ 0.8
KLHDC3-203ENST00000332245 ZNF521Q96K83 1311 aa20.06■□□□□ 0.8
KLHDC3-203ENST00000332245 C5P01031 1676 aa20.06■□□□□ 0.8
KLHDC3-203ENST00000332245 CHL1O00533 1208 aa20.05■□□□□ 0.8
KLHDC3-203ENST00000332245 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.81e-7■■□□□ 14.3
KLHDC3-203ENST00000332245 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms