RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 UBR2Q8IWV8 1755 aa27.72■■■□□ 2.03
YBX1-202ENST00000332220 CEMIPQ8WUJ3 1361 aa27.72■■■□□ 2.03
YBX1-202ENST00000332220 C5P01031 1676 aa27.72■■■□□ 2.03
YBX1-202ENST00000332220 SLC52A2Q9HAB3 445 aa27.71■■■□□ 2.03
YBX1-202ENST00000332220 ASAP1Q9ULH1 1129 aa27.71■■■□□ 2.03
YBX1-202ENST00000332220 PALLDQ8WX93 1383 aa27.71■■■□□ 2.03
YBX1-202ENST00000332220 TMPOP42166 694 aaKnown RBP27.69■■■□□ 2.02
YBX1-202ENST00000332220 DCTN1Q14203 1278 aa27.69■■■□□ 2.02
YBX1-202ENST00000332220 MCM10Q7L590 875 aa27.69■■■□□ 2.02
YBX1-202ENST00000332220 ATG3Q9NT62 314 aa27.69■■■□□ 2.02
YBX1-202ENST00000332220 RTF1Q92541 710 aaKnown RBP27.68■■■□□ 2.02
YBX1-202ENST00000332220 RRP7AQ9Y3A4 280 aaKnown RBP27.68■■■□□ 2.02
YBX1-202ENST00000332220 TUBGCP6Q96RT7 1819 aa27.68■■■□□ 2.02
YBX1-202ENST00000332220 ZNF831Q5JPB2 1677 aa27.68■■■□□ 2.02
YBX1-202ENST00000332220 HTATSF1O43719 755 aaKnown RBP27.67■■■□□ 2.02
YBX1-202ENST00000332220 KCNQ4P56696 695 aa27.66■■■□□ 2.02
YBX1-202ENST00000332220 MIER1Q8N108 512 aa27.66■■■□□ 2.02
YBX1-202ENST00000332220 SMARCC1Q92922 1105 aaPredicted RBP27.66■■■□□ 2.02
YBX1-202ENST00000332220 LRRC4BQ9NT99 713 aa27.66■■■□□ 2.02
YBX1-202ENST00000332220 COL5A3P25940 1745 aaPredicted RBP27.65■■■□□ 2.02
YBX1-202ENST00000332220 RIPK4P57078 832 aa27.65■■■□□ 2.02
YBX1-202ENST00000332220 TEFQ10587 303 aa27.65■■■□□ 2.02
YBX1-202ENST00000332220 KDM3BQ7LBC6 1761 aa27.65■■■□□ 2.02
YBX1-202ENST00000332220 TJP1Q07157 1748 aa27.64■■■□□ 2.02
YBX1-202ENST00000332220 CCER2I3L3R5 266 aa27.64■■■□□ 2.02
YBX1-202ENST00000332220 FAM9BQ8IZU0 186 aa27.63■■■□□ 2.01
YBX1-202ENST00000332220 APAF1O14727 1248 aa27.62■■■□□ 2.01
YBX1-202ENST00000332220 NEUROD2Q15784 382 aa27.62■■■□□ 2.01
YBX1-202ENST00000332220 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
YBX1-202ENST00000332220 CCNL1Q9UK58 526 aaPredicted RBP27.62■■■□□ 2.01
YBX1-202ENST00000332220 CICQ96RK0 1608 aaPredicted RBP27.62■■■□□ 2.01
YBX1-202ENST00000332220 KCPQ6ZWJ8 1503 aa27.62■■■□□ 2.01
YBX1-202ENST00000332220 SLC39A6Q13433 755 aa27.61■■■□□ 2.01
YBX1-202ENST00000332220 SLC27A3Q5K4L6 730 aa27.61■■■□□ 2.01
YBX1-202ENST00000332220 ANO8Q9HCE9 1232 aaPredicted RBP27.6■■■□□ 2.01
YBX1-202ENST00000332220 QSER1Q2KHR3 1735 aa27.6■■■□□ 2.01
YBX1-202ENST00000332220 MYH14Q7Z406 1995 aaKnown RBP27.6■■■□□ 2.01
YBX1-202ENST00000332220 C4BP0C0L5 1744 aa27.59■■■□□ 2.01
YBX1-202ENST00000332220 LOC102724428A0A0B4J2F2 783 aa27.59■■■□□ 2.01
YBX1-202ENST00000332220 SIK1P57059 783 aa27.59■■■□□ 2.01
YBX1-202ENST00000332220 SLC4A9Q96Q91 983 aa27.58■■■□□ 2.01
YBX1-202ENST00000332220 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
YBX1-202ENST00000332220 UBR3Q6ZT12 1888 aa27.57■■■□□ 2
YBX1-202ENST00000332220 SENP3-EIF4A1A0A087X0R7 540 aa27.57■■■□□ 2
YBX1-202ENST00000332220 RBM42Q9BTD8 480 aaKnown RBP27.57■■■□□ 2
YBX1-202ENST00000332220 PTCD1O75127 700 aaKnown RBP27.56■■■□□ 2
YBX1-202ENST00000332220 LMOD3Q0VAK6 560 aa27.55■■■□□ 2
YBX1-202ENST00000332220 ITPK1Q13572 414 aa27.54■■■□□ 2
YBX1-202ENST00000332220 BTBD11A6QL63 1104 aa27.53■■■□□ 2
YBX1-202ENST00000332220 KCNQ3O43525 872 aa27.53■■■□□ 2
YBX1-202ENST00000332220 ATP6V1AP38606 617 aa27.53■■■□□ 2
YBX1-202ENST00000332220 TAF7Q15545 349 aaPredicted RBP27.53■■■□□ 2
YBX1-202ENST00000332220 NBPF14Q5TI25 921 aa27.53■■■□□ 2
YBX1-202ENST00000332220 ZNF827Q17R98 1081 aa27.52■■■□□ 2
YBX1-202ENST00000332220 ZNF790Q6PG37 636 aa27.52■■■□□ 2
YBX1-202ENST00000332220 CASZ1Q86V15 1759 aa27.52■■■□□ 2
YBX1-202ENST00000332220 PSDA5PKW4 1024 aaPredicted RBP27.51■■□□□ 1.99
YBX1-202ENST00000332220 R3HDM1Q15032 1099 aaKnown RBP27.51■■□□□ 1.99
YBX1-202ENST00000332220 LINC00116Q8NCU8 138 aa27.51■■□□□ 1.99
YBX1-202ENST00000332220 TTC5Q8N0Z6 440 aa27.5■■□□□ 1.99
YBX1-202ENST00000332220 AKT1S1Q96B36 256 aa27.5■■□□□ 1.99
YBX1-202ENST00000332220 STK32BQ9NY57 414 aa27.5■■□□□ 1.99
YBX1-202ENST00000332220 MIS18AQ9NYP9 233 aa27.5■■□□□ 1.99
YBX1-202ENST00000332220 SLC15A2Q16348 729 aa27.49■■□□□ 1.99
YBX1-202ENST00000332220 ZNF496Q96IT1 587 aaPredicted RBP27.49■■□□□ 1.99
YBX1-202ENST00000332220 LAMB4A4D0S4 1761 aa27.48■■□□□ 1.99
YBX1-202ENST00000332220 HEG1Q9ULI3 1381 aa27.46■■□□□ 1.99
YBX1-202ENST00000332220 DNAJC10Q8IXB1 793 aa27.44■■□□□ 1.98
YBX1-202ENST00000332220 FMNL2Q96PY5 1086 aa27.43■■□□□ 1.98
YBX1-202ENST00000332220 C4AP0C0L4 1744 aa27.42■■□□□ 1.98
YBX1-202ENST00000332220 CCDC27Q2M243 656 aa27.42■■□□□ 1.98
YBX1-202ENST00000332220 VSIG10Q8N0Z9 540 aa27.42■■□□□ 1.98
YBX1-202ENST00000332220 SALL2Q9Y467 1007 aaPredicted RBP27.42■■□□□ 1.98
YBX1-202ENST00000332220 PDGFDQ9GZP0 370 aaPredicted RBP27.41■■□□□ 1.98
YBX1-202ENST00000332220 TSPYL4Q9UJ04 414 aa27.41■■□□□ 1.98
YBX1-202ENST00000332220 NCBP3Q53F19 620 aaKnown RBP27.4■■□□□ 1.98
YBX1-202ENST00000332220 AMIGO3Q86WK7 504 aa27.4■■□□□ 1.98
YBX1-202ENST00000332220 WWC1Q8IX03 1113 aa27.4■■□□□ 1.98
YBX1-202ENST00000332220 AK7Q96M32 723 aa27.4■■□□□ 1.98
YBX1-202ENST00000332220 TFCP2L1Q9NZI6 479 aa27.4■■□□□ 1.98
YBX1-202ENST00000332220 PNPLA7Q6ZV29 1317 aa27.4■■□□□ 1.98
YBX1-202ENST00000332220 HMGB2P26583 209 aaKnown RBP27.39■■□□□ 1.98
YBX1-202ENST00000332220 LAS1LQ9Y4W2 734 aaKnown RBP27.39■■□□□ 1.98
YBX1-202ENST00000332220 CNTNAP4Q9C0A0 1308 aa27.39■■□□□ 1.97
YBX1-202ENST00000332220 CHL1O00533 1208 aa27.38■■□□□ 1.97
YBX1-202ENST00000332220 SMIM5Q71RC9 77 aa27.38■■□□□ 1.97
YBX1-202ENST00000332220 BABAM1Q9NWV8 329 aa27.38■■□□□ 1.97
YBX1-202ENST00000332220 PRAMEF22A3QJZ6 481 aa27.37■■□□□ 1.97
YBX1-202ENST00000332220 CYP19A1P11511 503 aaPredicted RBP27.37■■□□□ 1.97
YBX1-202ENST00000332220 CRKLP46109 303 aaKnown RBP27.37■■□□□ 1.97
YBX1-202ENST00000332220 EIF4A1P60842 406 aaKnown RBP27.37■■□□□ 1.97
YBX1-202ENST00000332220 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
YBX1-202ENST00000332220 ZNF853P0CG23 659 aa27.36■■□□□ 1.97
YBX1-202ENST00000332220 GNPATO15228 680 aa27.35■■□□□ 1.97
YBX1-202ENST00000332220 CFAP44Q96MT7 982 aa27.35■■□□□ 1.97
YBX1-202ENST00000332220 COL24A1Q17RW2 1714 aa27.35■■□□□ 1.97
YBX1-202ENST00000332220 CALD1Q05682 793 aaKnown RBP27.34■■□□□ 1.97
YBX1-202ENST00000332220 INTS5Q6P9B9 1019 aaKnown RBP27.34■■□□□ 1.97
YBX1-202ENST00000332220 SNRPA1P09661 255 aaKnown RBP27.33■■□□□ 1.97
YBX1-202ENST00000332220 CCDC87Q9NVE4 849 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms