RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PIGBQ92521 554 aa21.14■□□□□ 0.97
LRRC28-202ENST00000331450 RTF1Q92541 710 aaKnown RBP21.14■□□□□ 0.97
LRRC28-202ENST00000331450 TMOD3Q9NYL9 352 aa21.14■□□□□ 0.97
LRRC28-202ENST00000331450 NUP188Q5SRE5 1749 aa21.13■□□□□ 0.97
LRRC28-202ENST00000331450 CABP4P57796 275 aa21.13■□□□□ 0.97
LRRC28-202ENST00000331450 LMOD3Q0VAK6 560 aa21.13■□□□□ 0.97
LRRC28-202ENST00000331450 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
LRRC28-202ENST00000331450 TAF1LQ8IZX4 1826 aa21.13■□□□□ 0.97
LRRC28-202ENST00000331450 NEUROD2Q15784 382 aa21.12■□□□□ 0.97
LRRC28-202ENST00000331450 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
LRRC28-202ENST00000331450 KCPQ6ZWJ8 1503 aa21.11■□□□□ 0.97
LRRC28-202ENST00000331450 TJP1Q07157 1748 aa21.11■□□□□ 0.97
LRRC28-202ENST00000331450 TEFQ10587 303 aa21.1■□□□□ 0.97
LRRC28-202ENST00000331450 CCDC27Q2M243 656 aa21.1■□□□□ 0.97
LRRC28-202ENST00000331450 THUMPD2Q9BTF0 503 aaKnown RBP21.1■□□□□ 0.97
LRRC28-202ENST00000331450 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
LRRC28-202ENST00000331450 C5P01031 1676 aa21.09■□□□□ 0.97
LRRC28-202ENST00000331450 PLSCR1O15162 318 aa21.09■□□□□ 0.97
LRRC28-202ENST00000331450 APBA3O96018 575 aa21.09■□□□□ 0.97
LRRC28-202ENST00000331450 SF3B2Q13435 895 aaKnown RBP21.08■□□□□ 0.97
LRRC28-202ENST00000331450 PALLDQ8WX93 1383 aa21.08■□□□□ 0.96
LRRC28-202ENST00000331450 SOCS7O14512 581 aa21.07■□□□□ 0.96
LRRC28-202ENST00000331450 BAG6P46379 1132 aa21.07■□□□□ 0.96
LRRC28-202ENST00000331450 NGEFQ8N5V2 710 aa21.07■□□□□ 0.96
LRRC28-202ENST00000331450 ATG3Q9NT62 314 aa21.07■□□□□ 0.96
LRRC28-202ENST00000331450 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
LRRC28-202ENST00000331450 SENP3-EIF4A1A0A087X0R7 540 aa21.06■□□□□ 0.96
LRRC28-202ENST00000331450 LAMB4A4D0S4 1761 aa21.05■□□□□ 0.96
LRRC28-202ENST00000331450 DEFB132Q7Z7B7 95 aa21.05■□□□□ 0.96
LRRC28-202ENST00000331450 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
LRRC28-202ENST00000331450 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
LRRC28-202ENST00000331450 CAMKK2Q96RR4 588 aa21.05■□□□□ 0.96
LRRC28-202ENST00000331450 TAF7Q15545 349 aaPredicted RBP21.04■□□□□ 0.96
LRRC28-202ENST00000331450 ZNF521Q96K83 1311 aa21.04■□□□□ 0.96
LRRC28-202ENST00000331450 EN1Q05925 392 aaPredicted RBP21.03■□□□□ 0.96
LRRC28-202ENST00000331450 SLC39A6Q13433 755 aa21.02■□□□□ 0.96
LRRC28-202ENST00000331450 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
LRRC28-202ENST00000331450 EZH2Q15910 746 aaKnown RBP21.01■□□□□ 0.95
LRRC28-202ENST00000331450 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
LRRC28-202ENST00000331450 PROM2Q8N271 834 aa21.01■□□□□ 0.95
LRRC28-202ENST00000331450 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
LRRC28-202ENST00000331450 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
LRRC28-202ENST00000331450 TXNRD1Q16881 649 aa21■□□□□ 0.95
LRRC28-202ENST00000331450 BABAM1Q9NWV8 329 aa21■□□□□ 0.95
LRRC28-202ENST00000331450 QSER1Q2KHR3 1735 aa21■□□□□ 0.95
LRRC28-202ENST00000331450 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
LRRC28-202ENST00000331450 CALD1Q05682 793 aaKnown RBP20.99■□□□□ 0.95
LRRC28-202ENST00000331450 SLC4A9Q96Q91 983 aa20.99■□□□□ 0.95
LRRC28-202ENST00000331450 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
LRRC28-202ENST00000331450 IL16Q14005 1332 aa20.99■□□□□ 0.95
LRRC28-202ENST00000331450 LOC102724428A0A0B4J2F2 783 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 CHL1O00533 1208 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 KCNQ3O43525 872 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 SIK1P57059 783 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 SLC27A3Q5K4L6 730 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 LRRC4BQ9NT99 713 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 MIS18AQ9NYP9 233 aa20.98■□□□□ 0.95
LRRC28-202ENST00000331450 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
LRRC28-202ENST00000331450 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
LRRC28-202ENST00000331450 IFT57Q9NWB7 429 aa20.97■□□□□ 0.95
LRRC28-202ENST00000331450 HEG1Q9ULI3 1381 aa20.97■□□□□ 0.95
LRRC28-202ENST00000331450 UBR3Q6ZT12 1888 aa20.96■□□□□ 0.95
LRRC28-202ENST00000331450 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
LRRC28-202ENST00000331450 CCNL1Q9UK58 526 aaPredicted RBP20.96■□□□□ 0.95
LRRC28-202ENST00000331450 MYH14Q7Z406 1995 aaKnown RBP20.96■□□□□ 0.95
LRRC28-202ENST00000331450 PTCD1O75127 700 aaKnown RBP20.95■□□□□ 0.94
LRRC28-202ENST00000331450 GNAI1P63096 354 aa20.95■□□□□ 0.94
LRRC28-202ENST00000331450 TSPYL4Q9UJ04 414 aa20.95■□□□□ 0.94
LRRC28-202ENST00000331450 KCNQ4P56696 695 aa20.94■□□□□ 0.94
LRRC28-202ENST00000331450 ITPK1Q13572 414 aa20.94■□□□□ 0.94
LRRC28-202ENST00000331450 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
LRRC28-202ENST00000331450 RBM42Q9BTD8 480 aaKnown RBP20.94■□□□□ 0.94
LRRC28-202ENST00000331450 EIF4A1P60842 406 aaKnown RBP20.93■□□□□ 0.94
LRRC28-202ENST00000331450 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
LRRC28-202ENST00000331450 FMNL2Q96PY5 1086 aa20.93■□□□□ 0.94
LRRC28-202ENST00000331450 MBIPQ9NS73 344 aa20.93■□□□□ 0.94
LRRC28-202ENST00000331450 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
LRRC28-202ENST00000331450 LAS1LQ9Y4W2 734 aaKnown RBP20.92■□□□□ 0.94
LRRC28-202ENST00000331450 SPINK5Q9NQ38 1064 aaPredicted RBP20.91■□□□□ 0.94
LRRC28-202ENST00000331450 LINC00116Q8NCU8 138 aa20.9■□□□□ 0.94
LRRC28-202ENST00000331450 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
LRRC28-202ENST00000331450 ZBED9Q6R2W3 1325 aa20.89■□□□□ 0.93
LRRC28-202ENST00000331450 DNAJC10Q8IXB1 793 aa20.89■□□□□ 0.93
LRRC28-202ENST00000331450 FANCIQ9NVI1 1328 aa20.88■□□□□ 0.93
LRRC28-202ENST00000331450 GOLGA2Q08379 1002 aa20.88■□□□□ 0.93
LRRC28-202ENST00000331450 TSR2Q969E8 191 aaKnown RBP20.88■□□□□ 0.93
LRRC28-202ENST00000331450 ANO8Q9HCE9 1232 aaPredicted RBP20.88■□□□□ 0.93
LRRC28-202ENST00000331450 CASZ1Q86V15 1759 aa20.87■□□□□ 0.93
LRRC28-202ENST00000331450 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
LRRC28-202ENST00000331450 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
LRRC28-202ENST00000331450 SNRPA1P09661 255 aaKnown RBP20.87■□□□□ 0.93
LRRC28-202ENST00000331450 PRAMEF22A3QJZ6 481 aa20.86■□□□□ 0.93
LRRC28-202ENST00000331450 CYP19A1P11511 503 aaPredicted RBP20.86■□□□□ 0.93
LRRC28-202ENST00000331450 ZNF827Q17R98 1081 aa20.86■□□□□ 0.93
LRRC28-202ENST00000331450 KRT24Q2M2I5 525 aa20.86■□□□□ 0.93
LRRC28-202ENST00000331450 AKT1S1Q96B36 256 aa20.86■□□□□ 0.93
LRRC28-202ENST00000331450 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
LRRC28-202ENST00000331450 TEX13AQ9BXU3 409 aaPredicted RBP20.85■□□□□ 0.93
LRRC28-202ENST00000331450 E9PSI1 815 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms