RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 RRAGDQ9NQL2 400 aaPredicted RBP10.9□□□□□ -0.66
CPNE8-201ENST00000331366 CCT4P50991 539 aaKnown RBP10.9□□□□□ -0.66
CPNE8-201ENST00000331366 ALDH8A1Q9H2A2 487 aaPredicted RBP10.9□□□□□ -0.66
CPNE8-201ENST00000331366 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
CPNE8-201ENST00000331366 ABCA3Q99758 1704 aa10.89□□□□□ -0.67
CPNE8-201ENST00000331366 EIF4A2Q14240 407 aaKnown RBP10.89□□□□□ -0.67
CPNE8-201ENST00000331366 SRCIN1Q9C0H9 1055 aa10.89□□□□□ -0.67
CPNE8-201ENST00000331366 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
CPNE8-201ENST00000331366 ZNF500O60304 480 aaPredicted RBP10.89□□□□□ -0.67
CPNE8-201ENST00000331366 POLA2Q14181 598 aa10.89□□□□□ -0.67
CPNE8-201ENST00000331366 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
CPNE8-201ENST00000331366 RPAP1Q9BWH6 1393 aaPredicted RBP10.88□□□□□ -0.67
CPNE8-201ENST00000331366 MTX1Q13505 466 aa10.88□□□□□ -0.67
CPNE8-201ENST00000331366 C8orf58Q8NAV2 365 aa10.88□□□□□ -0.67
CPNE8-201ENST00000331366 UTYO14607 1347 aa10.88□□□□□ -0.67
CPNE8-201ENST00000331366 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
CPNE8-201ENST00000331366 TSPYL6Q8N831 410 aa10.88□□□□□ -0.67
CPNE8-201ENST00000331366 COG3Q96JB2 828 aa10.88□□□□□ -0.67
CPNE8-201ENST00000331366 WNK3Q9BYP7 1800 aa10.87□□□□□ -0.67
CPNE8-201ENST00000331366 PLCH1Q4KWH8 1693 aa10.86□□□□□ -0.67
CPNE8-201ENST00000331366 RREB1Q92766 1687 aa10.86□□□□□ -0.67
CPNE8-201ENST00000331366 LMBRD1Q9NUN5 540 aa10.86□□□□□ -0.67
CPNE8-201ENST00000331366 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
CPNE8-201ENST00000331366 FBXO31Q5XUX0 539 aaPredicted RBP10.86□□□□□ -0.67
CPNE8-201ENST00000331366 CHMP4AQ9BY43 222 aa10.86□□□□□ -0.67
CPNE8-201ENST00000331366 CCDC171Q6TFL3 1326 aa10.86□□□□□ -0.67
CPNE8-201ENST00000331366 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
CPNE8-201ENST00000331366 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
CPNE8-201ENST00000331366 BAG4O95429 457 aaKnown RBP10.85□□□□□ -0.67
CPNE8-201ENST00000331366 TPM2P07951 284 aa10.85□□□□□ -0.67
CPNE8-201ENST00000331366 EMILIN1Q9Y6C2 1016 aa10.84□□□□□ -0.67
CPNE8-201ENST00000331366 BRD1O95696 1058 aa10.84□□□□□ -0.67
CPNE8-201ENST00000331366 REC8O95072 547 aa10.83□□□□□ -0.67
CPNE8-201ENST00000331366 NME9Q86XW9 330 aa10.83□□□□□ -0.67
CPNE8-201ENST00000331366 RGPD5Q99666 1765 aa10.83□□□□□ -0.67
CPNE8-201ENST00000331366 DCCP43146 1447 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 WAPLQ7Z5K2 1190 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 GAS2L2Q8NHY3 880 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 SSH3Q8TE77 659 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 ZDHHC9Q9Y397 364 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 ZNF831Q5JPB2 1677 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 RAB11FIP3O75154 756 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 ANKRD36CQ5JPF3 1778 aa10.83□□□□□ -0.68
CPNE8-201ENST00000331366 LAMB2P55268 1798 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 MFAP1P55081 439 aaKnown RBP10.82□□□□□ -0.68
CPNE8-201ENST00000331366 ATP8B2P98198 1209 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 LRP6O75581 1613 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
CPNE8-201ENST00000331366 HMMRO75330 724 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 UVSSAQ2YD98 709 aa10.82□□□□□ -0.68
CPNE8-201ENST00000331366 LRP5O75197 1615 aa10.81□□□□□ -0.68
CPNE8-201ENST00000331366 NHSL1Q5SYE7 1610 aa10.81□□□□□ -0.68
CPNE8-201ENST00000331366 ERC2O15083 957 aa10.81□□□□□ -0.68
CPNE8-201ENST00000331366 RRP9O43818 475 aaKnown RBP10.81□□□□□ -0.68
CPNE8-201ENST00000331366 GAS2L3Q86XJ1 694 aa10.81□□□□□ -0.68
CPNE8-201ENST00000331366 NOL7Q9UMY1 257 aaKnown RBP10.81□□□□□ -0.68
CPNE8-201ENST00000331366 ACEP12821 1306 aa10.81□□□□□ -0.68
CPNE8-201ENST00000331366 MAP3K19Q56UN5 1328 aa10.81□□□□□ -0.68
CPNE8-201ENST00000331366 SLKQ9H2G2 1235 aaPredicted RBP10.81□□□□□ -0.68
CPNE8-201ENST00000331366 XIRP1Q702N8 1843 aaKnown RBP10.8□□□□□ -0.68
CPNE8-201ENST00000331366 OFD1O75665 1012 aa10.8□□□□□ -0.68
CPNE8-201ENST00000331366 MBD3O95983 291 aa10.8□□□□□ -0.68
CPNE8-201ENST00000331366 SDSP20132 328 aa10.8□□□□□ -0.68
CPNE8-201ENST00000331366 ESPNB1AK53 854 aa10.8□□□□□ -0.68
CPNE8-201ENST00000331366 TM6SF1Q9BZW5 370 aa10.8□□□□□ -0.68
CPNE8-201ENST00000331366 LNPKQ9C0E8 428 aa10.8□□□□□ -0.68
CPNE8-201ENST00000331366 MYH7P12883 1935 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 PDE1AP54750 535 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 TTC14Q96N46 770 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 ECM29Q5VYK3 1845 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 ERBB4Q15303 1308 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 DOCK2Q92608 1830 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 GNAI3P08754 354 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
CPNE8-201ENST00000331366 TTC41PQ6P2S7 1318 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 ESYT1Q9BSJ8 1104 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 C4AP0C0L4 1744 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 C4BP0C0L5 1744 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 KIAA1551Q9HCM1 1747 aa10.79□□□□□ -0.68
CPNE8-201ENST00000331366 HSPA4P34932 840 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 ANKRD45Q5TZF3 282 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
CPNE8-201ENST00000331366 TSGA10IPQ3SY00 556 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 ZSCAN30Q86W11 494 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
CPNE8-201ENST00000331366 NEUROD2Q15784 382 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 CASC1Q6TDU7 716 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 LRSAM1Q6UWE0 723 aa10.78□□□□□ -0.68
CPNE8-201ENST00000331366 ST18O60284 1047 aa10.77□□□□□ -0.68
CPNE8-201ENST00000331366 RAD50Q92878 1312 aa10.77□□□□□ -0.69
CPNE8-201ENST00000331366 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.69
CPNE8-201ENST00000331366 TIAM2Q8IVF5 1701 aa10.76□□□□□ -0.69
CPNE8-201ENST00000331366 SETD1BQ9UPS6 1966 aaKnown RBP10.76□□□□□ -0.69
CPNE8-201ENST00000331366 TNNT2P45379 298 aaPredicted RBP10.76□□□□□ -0.69
CPNE8-201ENST00000331366 FAM184AQ8NB25 1140 aa10.76□□□□□ -0.69
CPNE8-201ENST00000331366 A0A1B0GUL6 1792 aa10.76□□□□□ -0.69
CPNE8-201ENST00000331366 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.76□□□□□ -0.69
CPNE8-201ENST00000331366 TCHHQ07283 1943 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms