RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 EDC4Q6P2E9 1401 aaKnown RBP17.52■□□□□ 0.4
SNX20-202ENST00000330943 PHF14O94880 888 aa17.52■□□□□ 0.4
SNX20-202ENST00000330943 COG3Q96JB2 828 aa17.52■□□□□ 0.4
SNX20-202ENST00000330943 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
SNX20-202ENST00000330943 ZNF830Q96NB3 372 aaPredicted RBP17.51■□□□□ 0.39
SNX20-202ENST00000330943 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
SNX20-202ENST00000330943 UPF3BQ9BZI7 483 aaKnown RBP17.51■□□□□ 0.39
SNX20-202ENST00000330943 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
SNX20-202ENST00000330943 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
SNX20-202ENST00000330943 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
SNX20-202ENST00000330943 INTS4Q96HW7 963 aaKnown RBP17.51■□□□□ 0.39
SNX20-202ENST00000330943 AATKQ6ZMQ8 1374 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 F6X3S4 739 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 CHL1O00533 1208 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
SNX20-202ENST00000330943 RILPL2Q969X0 211 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 MYRIPQ8NFW9 859 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 PRDM10Q9NQV6 1147 aa17.5■□□□□ 0.39
SNX20-202ENST00000330943 SMAP1Q8IYB5 467 aaPredicted RBP17.49■□□□□ 0.39
SNX20-202ENST00000330943 TSC1Q92574 1164 aa17.48■□□□□ 0.39
SNX20-202ENST00000330943 PREX1Q8TCU6 1659 aa17.48■□□□□ 0.39
SNX20-202ENST00000330943 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
SNX20-202ENST00000330943 ANAPC15P60006 121 aa17.48■□□□□ 0.39
SNX20-202ENST00000330943 MX1P20591 662 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 CHMLP26374 656 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 G2E3Q7L622 706 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 PIBF1Q8WXW3 757 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
SNX20-202ENST00000330943 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 C17orf53Q8N3J3 647 aaPredicted RBP17.47■□□□□ 0.39
SNX20-202ENST00000330943 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 CCDC94Q9BW85 323 aaPredicted RBP17.47■□□□□ 0.39
SNX20-202ENST00000330943 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
SNX20-202ENST00000330943 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
SNX20-202ENST00000330943 NOLC1Q14978 699 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX20-202ENST00000330943 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
SNX20-202ENST00000330943 LRRCC1Q9C099 1032 aa17.46■□□□□ 0.39
SNX20-202ENST00000330943 SALL3Q9BXA9 1300 aa17.46■□□□□ 0.39
SNX20-202ENST00000330943 ADCY5O95622 1261 aa17.45■□□□□ 0.38
SNX20-202ENST00000330943 CPS1P31327 1500 aa17.45■□□□□ 0.38
SNX20-202ENST00000330943 GNAI2P04899 355 aa17.45■□□□□ 0.38
SNX20-202ENST00000330943 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
SNX20-202ENST00000330943 UVSSAQ2YD98 709 aa17.45■□□□□ 0.38
SNX20-202ENST00000330943 HCLS1P14317 486 aaPredicted RBP17.44■□□□□ 0.38
SNX20-202ENST00000330943 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
SNX20-202ENST00000330943 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
SNX20-202ENST00000330943 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
SNX20-202ENST00000330943 TCHHQ07283 1943 aa17.44■□□□□ 0.38
SNX20-202ENST00000330943 CCDC183Q5T5S1 534 aa17.44■□□□□ 0.38
SNX20-202ENST00000330943 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
SNX20-202ENST00000330943 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
SNX20-202ENST00000330943 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
SNX20-202ENST00000330943 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
SNX20-202ENST00000330943 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
SNX20-202ENST00000330943 PLCB2Q00722 1185 aa17.42■□□□□ 0.38
SNX20-202ENST00000330943 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
SNX20-202ENST00000330943 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
SNX20-202ENST00000330943 FAM177BA6PVY3 158 aa17.42■□□□□ 0.38
SNX20-202ENST00000330943 NUDT16Q96DE0 195 aaKnown RBP17.42■□□□□ 0.38
SNX20-202ENST00000330943 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
SNX20-202ENST00000330943 DLC1Q96QB1 1528 aa17.42■□□□□ 0.38
SNX20-202ENST00000330943 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
SNX20-202ENST00000330943 IL25Q9H293 177 aa17.41■□□□□ 0.38
SNX20-202ENST00000330943 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
SNX20-202ENST00000330943 METP08581 1390 aa17.4■□□□□ 0.38
SNX20-202ENST00000330943 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
SNX20-202ENST00000330943 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
SNX20-202ENST00000330943 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
SNX20-202ENST00000330943 CRB1P82279 1406 aa17.39■□□□□ 0.37
SNX20-202ENST00000330943 DIP2BQ9P265 1576 aa17.39■□□□□ 0.37
SNX20-202ENST00000330943 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNX20-202ENST00000330943 LARP6Q9BRS8 491 aaKnown RBP17.39■□□□□ 0.37
SNX20-202ENST00000330943 FIBPO43427 364 aa17.38■□□□□ 0.37
SNX20-202ENST00000330943 ZSCAN22P10073 491 aaPredicted RBP17.38■□□□□ 0.37
SNX20-202ENST00000330943 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
SNX20-202ENST00000330943 KIF3AQ9Y496 699 aa17.38■□□□□ 0.37
SNX20-202ENST00000330943 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
SNX20-202ENST00000330943 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
SNX20-202ENST00000330943 HSPA4P34932 840 aa17.38■□□□□ 0.37
SNX20-202ENST00000330943 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
SNX20-202ENST00000330943 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
SNX20-202ENST00000330943 FOXO3O43524 673 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 KDM4AO75164 1064 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 UBE2HP62256 183 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 STAP2Q9UGK3 403 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
SNX20-202ENST00000330943 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 STK31Q9BXU1 1019 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 SPTLC3Q9NUV7 552 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 MON2Q7Z3U7 1717 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 GNAI3P08754 354 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 CBX1P83916 185 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
SNX20-202ENST00000330943 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms