RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 CUL4AQ13619 759 aa18.26■□□□□ 0.51
RGPD6-202ENST00000330331 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
RGPD6-202ENST00000330331 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
RGPD6-202ENST00000330331 SMTNL1A8MU46 457 aa18.25■□□□□ 0.51
RGPD6-202ENST00000330331 LRMPQ12912 555 aa18.25■□□□□ 0.51
RGPD6-202ENST00000330331 KRT222Q8N1A0 295 aa18.25■□□□□ 0.51
RGPD6-202ENST00000330331 ST7Q9NRC1 585 aa18.25■□□□□ 0.51
RGPD6-202ENST00000330331 VAMP4O75379 141 aa18.24■□□□□ 0.51
RGPD6-202ENST00000330331 TNNT1P13805 278 aa18.24■□□□□ 0.51
RGPD6-202ENST00000330331 THUMPD2Q9BTF0 503 aaKnown RBP18.24■□□□□ 0.51
RGPD6-202ENST00000330331 PALD1Q9ULE6 856 aa18.24■□□□□ 0.51
RGPD6-202ENST00000330331 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
RGPD6-202ENST00000330331 SRCIN1Q9C0H9 1055 aa18.24■□□□□ 0.51
RGPD6-202ENST00000330331 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.24■□□□□ 0.51
RGPD6-202ENST00000330331 V9GYY5 206 aaPredicted RBP18.24■□□□□ 0.51
RGPD6-202ENST00000330331 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
RGPD6-202ENST00000330331 TPM3P06753 285 aa18.23■□□□□ 0.51
RGPD6-202ENST00000330331 TRIM34Q9BYJ4 488 aa18.23■□□□□ 0.51
RGPD6-202ENST00000330331 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
RGPD6-202ENST00000330331 SYCP1Q15431 976 aa18.22■□□□□ 0.51
RGPD6-202ENST00000330331 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
RGPD6-202ENST00000330331 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
RGPD6-202ENST00000330331 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
RGPD6-202ENST00000330331 FIBPO43427 364 aa18.22■□□□□ 0.51
RGPD6-202ENST00000330331 CCDC186Q7Z3E2 898 aa18.22■□□□□ 0.51
RGPD6-202ENST00000330331 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
RGPD6-202ENST00000330331 FUCA2Q9BTY2 467 aa18.21■□□□□ 0.51
RGPD6-202ENST00000330331 CALCOCO1Q9P1Z2 691 aa18.21■□□□□ 0.51
RGPD6-202ENST00000330331 ABCC4O15439 1325 aa18.21■□□□□ 0.51
RGPD6-202ENST00000330331 MCM2P49736 904 aa18.21■□□□□ 0.51
RGPD6-202ENST00000330331 KMT5BQ4FZB7 885 aa18.21■□□□□ 0.51
RGPD6-202ENST00000330331 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
RGPD6-202ENST00000330331 INTS4Q96HW7 963 aaKnown RBP18.2■□□□□ 0.5
RGPD6-202ENST00000330331 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
RGPD6-202ENST00000330331 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
RGPD6-202ENST00000330331 BRPF1P55201 1214 aaPredicted RBP18.2■□□□□ 0.5
RGPD6-202ENST00000330331 DRC7Q8IY82 874 aa18.2■□□□□ 0.5
RGPD6-202ENST00000330331 PIK3R4Q99570 1358 aa18.2■□□□□ 0.5
RGPD6-202ENST00000330331 TCHHQ07283 1943 aa18.2■□□□□ 0.5
RGPD6-202ENST00000330331 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
RGPD6-202ENST00000330331 TULP2O00295 520 aa18.19■□□□□ 0.5
RGPD6-202ENST00000330331 SLC20A2Q08357 652 aa18.19■□□□□ 0.5
RGPD6-202ENST00000330331 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
RGPD6-202ENST00000330331 DTNBO60941 627 aa18.18■□□□□ 0.5
RGPD6-202ENST00000330331 UBE2HP62256 183 aa18.18■□□□□ 0.5
RGPD6-202ENST00000330331 PTCH1Q13635 1447 aa18.18■□□□□ 0.5
RGPD6-202ENST00000330331 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
RGPD6-202ENST00000330331 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
RGPD6-202ENST00000330331 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
RGPD6-202ENST00000330331 ZBTB9Q96C00 473 aa18.18■□□□□ 0.5
RGPD6-202ENST00000330331 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
RGPD6-202ENST00000330331 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
RGPD6-202ENST00000330331 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
RGPD6-202ENST00000330331 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
RGPD6-202ENST00000330331 TMEM132EQ6IEE7 984 aa18.17■□□□□ 0.5
RGPD6-202ENST00000330331 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
RGPD6-202ENST00000330331 FER1L4A9Z1Z3 1794 aa18.16■□□□□ 0.5
RGPD6-202ENST00000330331 NPHP1O15259 732 aa18.16■□□□□ 0.5
RGPD6-202ENST00000330331 LARP6Q9BRS8 491 aaKnown RBP18.16■□□□□ 0.5
RGPD6-202ENST00000330331 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
RGPD6-202ENST00000330331 PAXBP1Q9Y5B6 917 aa18.16■□□□□ 0.5
RGPD6-202ENST00000330331 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
RGPD6-202ENST00000330331 RPAP1Q9BWH6 1393 aaPredicted RBP18.15■□□□□ 0.5
RGPD6-202ENST00000330331 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
RGPD6-202ENST00000330331 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
RGPD6-202ENST00000330331 ZNF215Q9UL58 517 aaPredicted RBP18.15■□□□□ 0.5
RGPD6-202ENST00000330331 A2ML1A8K2U0 1454 aa18.15■□□□□ 0.5
RGPD6-202ENST00000330331 HNRNPH2P55795 449 aaKnown RBP18.15■□□□□ 0.5
RGPD6-202ENST00000330331 RBM6P78332 1123 aaKnown RBP18.15■□□□□ 0.5
RGPD6-202ENST00000330331 LUZP1Q86V48 1076 aa18.15■□□□□ 0.5
RGPD6-202ENST00000330331 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
RGPD6-202ENST00000330331 SBNO2Q9Y2G9 1366 aa18.15■□□□□ 0.5
RGPD6-202ENST00000330331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.14■□□□□ 0.5
RGPD6-202ENST00000330331 MCCP23508 829 aa18.14■□□□□ 0.5
RGPD6-202ENST00000330331 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.5
RGPD6-202ENST00000330331 FBXO38Q6PIJ6 1188 aa18.14■□□□□ 0.5
RGPD6-202ENST00000330331 ZFP91Q96JP5 570 aaPredicted RBP18.14■□□□□ 0.5
RGPD6-202ENST00000330331 IRX3P78415 501 aaPredicted RBP18.14■□□□□ 0.49
RGPD6-202ENST00000330331 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.49
RGPD6-202ENST00000330331 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
RGPD6-202ENST00000330331 ADGRB1O14514 1584 aa18.14■□□□□ 0.49
RGPD6-202ENST00000330331 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
RGPD6-202ENST00000330331 CEP135Q66GS9 1140 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
RGPD6-202ENST00000330331 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 TNRQ92752 1358 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 C3P01024 1663 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
RGPD6-202ENST00000330331 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 ELF2Q15723 593 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 ZSCAN25Q6NSZ9 544 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 CEP85Q6P2H3 762 aa18.13■□□□□ 0.49
RGPD6-202ENST00000330331 CCDC192P0DO97 292 aa18.12■□□□□ 0.49
RGPD6-202ENST00000330331 C8orf58Q8NAV2 365 aa18.12■□□□□ 0.49
RGPD6-202ENST00000330331 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
RGPD6-202ENST00000330331 FEZ2Q9UHY8 353 aaPredicted RBP18.12■□□□□ 0.49
RGPD6-202ENST00000330331 RTL1A6NKG5 1358 aa18.12■□□□□ 0.49
RGPD6-202ENST00000330331 CEBPAP49715 358 aaPredicted RBP18.12■□□□□ 0.49
RGPD6-202ENST00000330331 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms