RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
CTHRC1-201ENST00000330295 HOXC9P31274 260 aa21.21■□□□□ 0.99
CTHRC1-201ENST00000330295 CTCFP49711 727 aaPredicted RBP21.21■□□□□ 0.99
CTHRC1-201ENST00000330295 SIK1P57059 783 aa21.21■□□□□ 0.99
CTHRC1-201ENST00000330295 DALRD3Q5D0E6 543 aaKnown RBP21.21■□□□□ 0.99
CTHRC1-201ENST00000330295 ABHD8Q96I13 439 aa21.21■□□□□ 0.99
CTHRC1-201ENST00000330295 TMF1P82094 1093 aa21.2■□□□□ 0.98
CTHRC1-201ENST00000330295 MLLT1Q03111 559 aaPredicted RBP21.2■□□□□ 0.98
CTHRC1-201ENST00000330295 RAPGEF4Q8WZA2 1011 aa21.2■□□□□ 0.98
CTHRC1-201ENST00000330295 CREBZFQ9NS37 354 aa21.19■□□□□ 0.98
CTHRC1-201ENST00000330295 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
CTHRC1-201ENST00000330295 EDC4Q6P2E9 1401 aaKnown RBP21.19■□□□□ 0.98
CTHRC1-201ENST00000330295 PIGBQ92521 554 aa21.18■□□□□ 0.98
CTHRC1-201ENST00000330295 AIDAQ96BJ3 306 aa21.18■□□□□ 0.98
CTHRC1-201ENST00000330295 GLTPD2A6NH11 291 aa21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 TATP17735 454 aaPredicted RBP21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 ITPK1Q13572 414 aa21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 NBPF6Q5VWK0 638 aa21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 USHBP1Q8N6Y0 703 aa21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 NBPF4Q96M43 638 aa21.17■□□□□ 0.98
CTHRC1-201ENST00000330295 AMPHP49418 695 aa21.16■□□□□ 0.98
CTHRC1-201ENST00000330295 PARP3Q9Y6F1 533 aa21.16■□□□□ 0.98
CTHRC1-201ENST00000330295 KDM6AO15550 1401 aaPredicted RBP21.15■□□□□ 0.98
CTHRC1-201ENST00000330295 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
CTHRC1-201ENST00000330295 CYP27B1O15528 508 aa21.14■□□□□ 0.97
CTHRC1-201ENST00000330295 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
CTHRC1-201ENST00000330295 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
CTHRC1-201ENST00000330295 ATP6V1AP38606 617 aa21.13■□□□□ 0.97
CTHRC1-201ENST00000330295 RGS19P49795 217 aa21.13■□□□□ 0.97
CTHRC1-201ENST00000330295 LBX1P52954 281 aa21.13■□□□□ 0.97
CTHRC1-201ENST00000330295 GYS1P13807 737 aa21.12■□□□□ 0.97
CTHRC1-201ENST00000330295 RASSF7Q02833 373 aa21.12■□□□□ 0.97
CTHRC1-201ENST00000330295 RTCBQ9Y3I0 505 aaKnown RBP21.12■□□□□ 0.97
CTHRC1-201ENST00000330295 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
CTHRC1-201ENST00000330295 FBLN1P23142 703 aa21.1■□□□□ 0.97
CTHRC1-201ENST00000330295 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
CTHRC1-201ENST00000330295 POTECB2RU33 542 aa21.09■□□□□ 0.97
CTHRC1-201ENST00000330295 LMNB1P20700 586 aa21.09■□□□□ 0.97
CTHRC1-201ENST00000330295 ARHGEF1Q92888 912 aaKnown RBP21.09■□□□□ 0.97
CTHRC1-201ENST00000330295 RTL1A6NKG5 1358 aa21.09■□□□□ 0.97
CTHRC1-201ENST00000330295 CHRNA5P30532 468 aa21.08■□□□□ 0.97
CTHRC1-201ENST00000330295 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.97
CTHRC1-201ENST00000330295 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.97
CTHRC1-201ENST00000330295 WBP1LQ9NX94 342 aa21.08■□□□□ 0.97
CTHRC1-201ENST00000330295 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
CTHRC1-201ENST00000330295 A0A1W2PP64 1363 aa21.08■□□□□ 0.96
CTHRC1-201ENST00000330295 CCDC85CA6NKD9 419 aa21.06■□□□□ 0.96
CTHRC1-201ENST00000330295 CHADLQ6NUI6 762 aa21.06■□□□□ 0.96
CTHRC1-201ENST00000330295 COG3Q96JB2 828 aa21.06■□□□□ 0.96
CTHRC1-201ENST00000330295 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
CTHRC1-201ENST00000330295 RFC4P35249 363 aa21.05■□□□□ 0.96
CTHRC1-201ENST00000330295 VEGFBP49765 207 aa21.05■□□□□ 0.96
CTHRC1-201ENST00000330295 NKX1-1Q15270 411 aaPredicted RBP21.05■□□□□ 0.96
CTHRC1-201ENST00000330295 TMOD3Q9NYL9 352 aa21.05■□□□□ 0.96
CTHRC1-201ENST00000330295 VIRMAQ69YN4 1812 aaKnown RBP21.05■□□□□ 0.96
CTHRC1-201ENST00000330295 HSPA8P11142 646 aaKnown RBP21.04■□□□□ 0.96
CTHRC1-201ENST00000330295 CCDC88AQ3V6T2 1871 aa21.04■□□□□ 0.96
CTHRC1-201ENST00000330295 ROCK2O75116 1388 aaKnown RBP21.01■□□□□ 0.95
CTHRC1-201ENST00000330295 KDRP35968 1356 aa21.01■□□□□ 0.95
CTHRC1-201ENST00000330295 RRS1Q15050 365 aaKnown RBP21.01■□□□□ 0.95
CTHRC1-201ENST00000330295 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
CTHRC1-201ENST00000330295 DPY19L2Q6NUT2 758 aa21.01■□□□□ 0.95
CTHRC1-201ENST00000330295 DDR1Q08345 913 aa21■□□□□ 0.95
CTHRC1-201ENST00000330295 ATG3Q9NT62 314 aa21■□□□□ 0.95
CTHRC1-201ENST00000330295 COL5A3P25940 1745 aaPredicted RBP20.99■□□□□ 0.95
CTHRC1-201ENST00000330295 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
CTHRC1-201ENST00000330295 PASKQ96RG2 1323 aa20.99■□□□□ 0.95
CTHRC1-201ENST00000330295 CNTNAP4Q9C0A0 1308 aa20.99■□□□□ 0.95
CTHRC1-201ENST00000330295 PDE4DIPQ5VU43 2346 aa20.99■□□□□ 0.95
CTHRC1-201ENST00000330295 ZNF831Q5JPB2 1677 aa20.99■□□□□ 0.95
CTHRC1-201ENST00000330295 POTEIP0CG38 1075 aa20.98■□□□□ 0.95
CTHRC1-201ENST00000330295 POTEJP0CG39 1038 aa20.98■□□□□ 0.95
CTHRC1-201ENST00000330295 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
CTHRC1-201ENST00000330295 INSRP06213 1382 aa20.97■□□□□ 0.95
CTHRC1-201ENST00000330295 FKBP8Q14318 412 aa20.96■□□□□ 0.95
CTHRC1-201ENST00000330295 TMEM88BA6NKF7 163 aa20.95■□□□□ 0.94
CTHRC1-201ENST00000330295 NFKBIEO00221 500 aa20.95■□□□□ 0.94
CTHRC1-201ENST00000330295 SPG7Q9UQ90 795 aa20.95■□□□□ 0.94
CTHRC1-201ENST00000330295 MYH14Q7Z406 1995 aaKnown RBP20.95■□□□□ 0.94
CTHRC1-201ENST00000330295 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
CTHRC1-201ENST00000330295 SRP68Q9UHB9 627 aaKnown RBP20.94■□□□□ 0.94
CTHRC1-201ENST00000330295 MAP2K1Q02750 393 aaPredicted RBP20.93■□□□□ 0.94
CTHRC1-201ENST00000330295 RBM42Q9BTD8 480 aaKnown RBP20.93■□□□□ 0.94
CTHRC1-201ENST00000330295 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
CTHRC1-201ENST00000330295 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
CTHRC1-201ENST00000330295 L3MBTL2Q969R5 705 aa20.92■□□□□ 0.94
CTHRC1-201ENST00000330295 USP42Q9H9J4 1324 aaKnown RBP20.92■□□□□ 0.94
CTHRC1-201ENST00000330295 DICER1Q9UPY3 1922 aaKnown RBP20.92■□□□□ 0.94
CTHRC1-201ENST00000330295 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
CTHRC1-201ENST00000330295 NCAPD2Q15021 1401 aa20.89■□□□□ 0.94
CTHRC1-201ENST00000330295 FLT4P35916 1363 aa20.89■□□□□ 0.93
CTHRC1-201ENST00000330295 ERFEQ4G0M1 354 aa20.89■□□□□ 0.93
CTHRC1-201ENST00000330295 LDHDQ86WU2 507 aa20.89■□□□□ 0.93
CTHRC1-201ENST00000330295 CFAP44Q96MT7 982 aa20.89■□□□□ 0.93
CTHRC1-201ENST00000330295 TNRC18O15417 2968 aaPredicted RBP20.88■□□□□ 0.93
CTHRC1-201ENST00000330295 RASSF10A6NK89 507 aa20.88■□□□□ 0.93
CTHRC1-201ENST00000330295 TM4SF1P30408 202 aa20.88■□□□□ 0.93
CTHRC1-201ENST00000330295 ITGBL1O95965 494 aaPredicted RBP20.87■□□□□ 0.93
CTHRC1-201ENST00000330295 PHKG2P15735 406 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms