RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 COL5A3P25940 1745 aaPredicted RBP19.73■□□□□ 0.75
CLRN1-203ENST00000328863 SLC15A2Q16348 729 aa19.72■□□□□ 0.75
CLRN1-203ENST00000328863 PNNQ9H307 717 aaKnown RBP19.72■□□□□ 0.75
CLRN1-203ENST00000328863 LRRC4BQ9NT99 713 aa19.72■□□□□ 0.75
CLRN1-203ENST00000328863 UBR2Q8IWV8 1755 aa19.72■□□□□ 0.75
CLRN1-203ENST00000328863 MAPK8IP3Q9UPT6 1336 aa19.72■□□□□ 0.75
CLRN1-203ENST00000328863 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
CLRN1-203ENST00000328863 RNMTO43148 476 aaKnown RBP19.7■□□□□ 0.74
CLRN1-203ENST00000328863 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 TJP1Q07157 1748 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 SIK1P57059 783 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.74
CLRN1-203ENST00000328863 ZNF827Q17R98 1081 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 SLC52A2Q9HAB3 445 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
CLRN1-203ENST00000328863 ATG3Q9NT62 314 aa19.68■□□□□ 0.74
CLRN1-203ENST00000328863 ANP32CO43423 234 aa19.67■□□□□ 0.74
CLRN1-203ENST00000328863 KCNQ4P56696 695 aa19.67■□□□□ 0.74
CLRN1-203ENST00000328863 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
CLRN1-203ENST00000328863 TEFQ10587 303 aa19.66■□□□□ 0.74
CLRN1-203ENST00000328863 NFATC2IPQ8NCF5 419 aa19.66■□□□□ 0.74
CLRN1-203ENST00000328863 RTF1Q92541 710 aaKnown RBP19.66■□□□□ 0.74
CLRN1-203ENST00000328863 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
CLRN1-203ENST00000328863 CEMIPQ8WUJ3 1361 aa19.66■□□□□ 0.74
CLRN1-203ENST00000328863 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
CLRN1-203ENST00000328863 LGR6Q9HBX8 967 aa19.65■□□□□ 0.74
CLRN1-203ENST00000328863 ATP6V1AP38606 617 aa19.64■□□□□ 0.73
CLRN1-203ENST00000328863 AK7Q96M32 723 aa19.64■□□□□ 0.73
CLRN1-203ENST00000328863 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.73
CLRN1-203ENST00000328863 TFCP2L1Q9NZI6 479 aa19.64■□□□□ 0.73
CLRN1-203ENST00000328863 PLEKHF1Q96S99 279 aa19.63■□□□□ 0.73
CLRN1-203ENST00000328863 PNPLA7Q6ZV29 1317 aa19.61■□□□□ 0.73
CLRN1-203ENST00000328863 HTATSF1O43719 755 aaKnown RBP19.61■□□□□ 0.73
CLRN1-203ENST00000328863 TTC5Q8N0Z6 440 aa19.61■□□□□ 0.73
CLRN1-203ENST00000328863 COL24A1Q17RW2 1714 aa19.61■□□□□ 0.73
CLRN1-203ENST00000328863 KDM3BQ7LBC6 1761 aa19.6■□□□□ 0.73
CLRN1-203ENST00000328863 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
CLRN1-203ENST00000328863 LINC00116Q8NCU8 138 aa19.6■□□□□ 0.73
CLRN1-203ENST00000328863 IL17REQ8NFR9 667 aa19.6■□□□□ 0.73
CLRN1-203ENST00000328863 SPON1Q9HCB6 807 aa19.6■□□□□ 0.73
CLRN1-203ENST00000328863 C4AP0C0L4 1744 aa19.59■□□□□ 0.73
CLRN1-203ENST00000328863 PTCD1O75127 700 aaKnown RBP19.59■□□□□ 0.73
CLRN1-203ENST00000328863 ITPK1Q13572 414 aa19.59■□□□□ 0.73
CLRN1-203ENST00000328863 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
CLRN1-203ENST00000328863 MTFR1LQ9H019 292 aa19.59■□□□□ 0.73
CLRN1-203ENST00000328863 CNTNAP4Q9C0A0 1308 aa19.58■□□□□ 0.73
CLRN1-203ENST00000328863 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.73
CLRN1-203ENST00000328863 MYH14Q7Z406 1995 aaKnown RBP19.57■□□□□ 0.72
CLRN1-203ENST00000328863 ZBTB7AO95365 584 aa19.57■□□□□ 0.72
CLRN1-203ENST00000328863 LMOD3Q0VAK6 560 aa19.57■□□□□ 0.72
CLRN1-203ENST00000328863 MCM10Q7L590 875 aa19.57■□□□□ 0.72
CLRN1-203ENST00000328863 SLC16A10Q8TF71 515 aa19.57■□□□□ 0.72
CLRN1-203ENST00000328863 PDGFDQ9GZP0 370 aaPredicted RBP19.57■□□□□ 0.72
CLRN1-203ENST00000328863 GNPATO15228 680 aa19.56■□□□□ 0.72
CLRN1-203ENST00000328863 SSFA2P28290 1259 aa19.56■□□□□ 0.72
CLRN1-203ENST00000328863 SLC39A6Q13433 755 aa19.56■□□□□ 0.72
CLRN1-203ENST00000328863 SLC4A9Q96Q91 983 aa19.56■□□□□ 0.72
CLRN1-203ENST00000328863 CCDC146Q8IYE0 955 aa19.55■□□□□ 0.72
CLRN1-203ENST00000328863 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
CLRN1-203ENST00000328863 BTBD11A6QL63 1104 aa19.54■□□□□ 0.72
CLRN1-203ENST00000328863 MSH5O43196 834 aa19.54■□□□□ 0.72
CLRN1-203ENST00000328863 PHF14O94880 888 aa19.54■□□□□ 0.72
CLRN1-203ENST00000328863 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
CLRN1-203ENST00000328863 VSIG10Q8N0Z9 540 aa19.54■□□□□ 0.72
CLRN1-203ENST00000328863 PPP1R1BQ9UD71 204 aaPredicted RBP19.54■□□□□ 0.72
CLRN1-203ENST00000328863 DCTN1Q14203 1278 aa19.53■□□□□ 0.72
CLRN1-203ENST00000328863 MRS2Q9HD23 443 aa19.53■□□□□ 0.72
CLRN1-203ENST00000328863 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
CLRN1-203ENST00000328863 HEG1Q9ULI3 1381 aa19.53■□□□□ 0.72
CLRN1-203ENST00000328863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.52■□□□□ 0.72
CLRN1-203ENST00000328863 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
CLRN1-203ENST00000328863 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
CLRN1-203ENST00000328863 FMNL2Q96PY5 1086 aa19.52■□□□□ 0.72
CLRN1-203ENST00000328863 RTCBQ9Y3I0 505 aaKnown RBP19.52■□□□□ 0.72
CLRN1-203ENST00000328863 ADRA2BP18089 450 aa19.51■□□□□ 0.71
CLRN1-203ENST00000328863 RIPK4P57078 832 aa19.51■□□□□ 0.71
CLRN1-203ENST00000328863 COL23A1Q86Y22 540 aaPredicted RBP19.51■□□□□ 0.71
CLRN1-203ENST00000328863 POLD1P28340 1107 aa19.5■□□□□ 0.71
CLRN1-203ENST00000328863 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
CLRN1-203ENST00000328863 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
CLRN1-203ENST00000328863 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
CLRN1-203ENST00000328863 ATF5Q9Y2D1 282 aaPredicted RBP19.5■□□□□ 0.71
CLRN1-203ENST00000328863 ZNF496Q96IT1 587 aaPredicted RBP19.49■□□□□ 0.71
CLRN1-203ENST00000328863 PTGER2P43116 358 aa19.48■□□□□ 0.71
CLRN1-203ENST00000328863 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
CLRN1-203ENST00000328863 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
CLRN1-203ENST00000328863 SCN7AQ01118 1682 aa19.48■□□□□ 0.71
CLRN1-203ENST00000328863 RPS6KA4O75676 772 aa19.47■□□□□ 0.71
CLRN1-203ENST00000328863 STARD3NLO95772 234 aa19.47■□□□□ 0.71
CLRN1-203ENST00000328863 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
CLRN1-203ENST00000328863 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
CLRN1-203ENST00000328863 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
CLRN1-203ENST00000328863 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
CLRN1-203ENST00000328863 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
CLRN1-203ENST00000328863 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
CLRN1-203ENST00000328863 COL15A1P39059 1388 aa19.45■□□□□ 0.7
CLRN1-203ENST00000328863 CYP19A1P11511 503 aaPredicted RBP19.45■□□□□ 0.7
CLRN1-203ENST00000328863 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
CLRN1-203ENST00000328863 SGIP1Q9BQI5 828 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms