RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 ZNF831Q5JPB2 1677 aa28.91■■■□□ 2.22
TNRC18-201ENST00000328270 NFATC2IPQ8NCF5 419 aa28.91■■■□□ 2.22
TNRC18-201ENST00000328270 LGR6Q9HBX8 967 aa28.91■■■□□ 2.22
TNRC18-201ENST00000328270 TFCP2L1Q9NZI6 479 aa28.91■■■□□ 2.22
TNRC18-201ENST00000328270 RNMTO43148 476 aaKnown RBP28.9■■■□□ 2.22
TNRC18-201ENST00000328270 ZBTB7AO95365 584 aa28.9■■■□□ 2.22
TNRC18-201ENST00000328270 PHACTR3Q96KR7 559 aa28.9■■■□□ 2.22
TNRC18-201ENST00000328270 MYBBP1AQ9BQG0 1328 aaKnown RBP28.9■■■□□ 2.22
TNRC18-201ENST00000328270 MAP3K5Q99683 1374 aa28.89■■■□□ 2.22
TNRC18-201ENST00000328270 FCHSD2O94868 740 aa28.89■■■□□ 2.22
TNRC18-201ENST00000328270 HMGB2P26583 209 aaKnown RBP28.89■■■□□ 2.22
TNRC18-201ENST00000328270 PNPLA7Q6ZV29 1317 aa28.89■■■□□ 2.21
TNRC18-201ENST00000328270 UBR3Q6ZT12 1888 aa28.89■■■□□ 2.21
TNRC18-201ENST00000328270 ZNF316A6NFI3 1004 aaPredicted RBP28.87■■■□□ 2.21
TNRC18-201ENST00000328270 SLC52A2Q9HAB3 445 aa28.87■■■□□ 2.21
TNRC18-201ENST00000328270 COL5A3P25940 1745 aaPredicted RBP28.86■■■□□ 2.21
TNRC18-201ENST00000328270 SIPA1L3O60292 1781 aaPredicted RBP28.85■■■□□ 2.21
TNRC18-201ENST00000328270 GNAT3A8MTJ3 354 aa28.85■■■□□ 2.21
TNRC18-201ENST00000328270 ATP6V1AP38606 617 aa28.85■■■□□ 2.21
TNRC18-201ENST00000328270 RBM42Q9BTD8 480 aaKnown RBP28.85■■■□□ 2.21
TNRC18-201ENST00000328270 ITPK1Q13572 414 aa28.84■■■□□ 2.21
TNRC18-201ENST00000328270 LINC00116Q8NCU8 138 aa28.84■■■□□ 2.21
TNRC18-201ENST00000328270 MTFR1LQ9H019 292 aa28.84■■■□□ 2.21
TNRC18-201ENST00000328270 ATF5Q9Y2D1 282 aaPredicted RBP28.84■■■□□ 2.21
TNRC18-201ENST00000328270 DLG5Q8TDM6 1919 aa28.83■■■□□ 2.21
TNRC18-201ENST00000328270 AK7Q96M32 723 aa28.82■■■□□ 2.2
TNRC18-201ENST00000328270 SLC4A9Q96Q91 983 aa28.82■■■□□ 2.2
TNRC18-201ENST00000328270 PRKRIP1Q9H875 184 aaPredicted RBP28.82■■■□□ 2.2
TNRC18-201ENST00000328270 TJP1Q07157 1748 aa28.81■■■□□ 2.2
TNRC18-201ENST00000328270 COL24A1Q17RW2 1714 aa28.81■■■□□ 2.2
TNRC18-201ENST00000328270 CICQ96RK0 1608 aaPredicted RBP28.81■■■□□ 2.2
TNRC18-201ENST00000328270 PTCD1O75127 700 aaKnown RBP28.8■■■□□ 2.2
TNRC18-201ENST00000328270 IL17REQ8NFR9 667 aa28.8■■■□□ 2.2
TNRC18-201ENST00000328270 UBR2Q8IWV8 1755 aa28.8■■■□□ 2.2
TNRC18-201ENST00000328270 PTGER2P43116 358 aa28.79■■■□□ 2.2
TNRC18-201ENST00000328270 SLC16A10Q8TF71 515 aa28.79■■■□□ 2.2
TNRC18-201ENST00000328270 PPP1R1BQ9UD71 204 aaPredicted RBP28.79■■■□□ 2.2
TNRC18-201ENST00000328270 COL23A1Q86Y22 540 aaPredicted RBP28.78■■■□□ 2.2
TNRC18-201ENST00000328270 MYH14Q7Z406 1995 aaKnown RBP28.78■■■□□ 2.2
TNRC18-201ENST00000328270 CEMIPQ8WUJ3 1361 aa28.76■■■□□ 2.2
TNRC18-201ENST00000328270 KCPQ6ZWJ8 1503 aa28.76■■■□□ 2.19
TNRC18-201ENST00000328270 MSH5O43196 834 aa28.76■■■□□ 2.19
TNRC18-201ENST00000328270 NEFMP07197 916 aa28.76■■■□□ 2.19
TNRC18-201ENST00000328270 TEFQ10587 303 aa28.76■■■□□ 2.19
TNRC18-201ENST00000328270 SLC39A6Q13433 755 aa28.76■■■□□ 2.19
TNRC18-201ENST00000328270 AMIGO3Q86WK7 504 aa28.76■■■□□ 2.19
TNRC18-201ENST00000328270 FLAD1Q8NFF5 587 aa28.75■■■□□ 2.19
TNRC18-201ENST00000328270 PLEKHF1Q96S99 279 aa28.75■■■□□ 2.19
TNRC18-201ENST00000328270 SGIP1Q9BQI5 828 aa28.75■■■□□ 2.19
TNRC18-201ENST00000328270 GNPATO15228 680 aa28.73■■■□□ 2.19
TNRC18-201ENST00000328270 PNNQ9H307 717 aaKnown RBP28.73■■■□□ 2.19
TNRC18-201ENST00000328270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.72■■■□□ 2.19
TNRC18-201ENST00000328270 PHF14O94880 888 aa28.72■■■□□ 2.19
TNRC18-201ENST00000328270 SMIM5Q71RC9 77 aa28.72■■■□□ 2.19
TNRC18-201ENST00000328270 RTF1Q92541 710 aaKnown RBP28.72■■■□□ 2.19
TNRC18-201ENST00000328270 CNTNAP4Q9C0A0 1308 aa28.71■■■□□ 2.19
TNRC18-201ENST00000328270 SSFA2P28290 1259 aa28.71■■■□□ 2.19
TNRC18-201ENST00000328270 MAPK8IP3Q9UPT6 1336 aa28.7■■■□□ 2.19
TNRC18-201ENST00000328270 RC3H1Q5TC82 1133 aaKnown RBP28.69■■■□□ 2.18
TNRC18-201ENST00000328270 MCM10Q7L590 875 aa28.69■■■□□ 2.18
TNRC18-201ENST00000328270 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
TNRC18-201ENST00000328270 TTC5Q8N0Z6 440 aa28.68■■■□□ 2.18
TNRC18-201ENST00000328270 DCTN1Q14203 1278 aa28.67■■■□□ 2.18
TNRC18-201ENST00000328270 NFE2L2Q16236 605 aa28.67■■■□□ 2.18
TNRC18-201ENST00000328270 C4AP0C0L4 1744 aa28.66■■■□□ 2.18
TNRC18-201ENST00000328270 POLD1P28340 1107 aa28.66■■■□□ 2.18
TNRC18-201ENST00000328270 WDR43Q15061 677 aaKnown RBP eCLIP28.66■■■□□ 2.18
TNRC18-201ENST00000328270 DNAJC10Q8IXB1 793 aa28.66■■■□□ 2.18
TNRC18-201ENST00000328270 RTCBQ9Y3I0 505 aaKnown RBP28.66■■■□□ 2.18
TNRC18-201ENST00000328270 CRKLP46109 303 aaKnown RBP28.65■■■□□ 2.18
TNRC18-201ENST00000328270 MSL1Q68DK7 614 aa28.65■■■□□ 2.18
TNRC18-201ENST00000328270 ZNF790Q6PG37 636 aa28.65■■■□□ 2.18
TNRC18-201ENST00000328270 ARXQ96QS3 562 aa28.65■■■□□ 2.18
TNRC18-201ENST00000328270 BTBD11A6QL63 1104 aa28.63■■■□□ 2.17
TNRC18-201ENST00000328270 RPS6KA4O75676 772 aa28.63■■■□□ 2.17
TNRC18-201ENST00000328270 VSIG10Q8N0Z9 540 aa28.63■■■□□ 2.17
TNRC18-201ENST00000328270 ZNF496Q96IT1 587 aaPredicted RBP28.61■■■□□ 2.17
TNRC18-201ENST00000328270 HEG1Q9ULI3 1381 aa28.61■■■□□ 2.17
TNRC18-201ENST00000328270 ADRA2BP18089 450 aa28.6■■■□□ 2.17
TNRC18-201ENST00000328270 TRAPPC3LQ5T215 181 aa28.6■■■□□ 2.17
TNRC18-201ENST00000328270 FHDC1Q9C0D6 1143 aaPredicted RBP28.6■■■□□ 2.17
TNRC18-201ENST00000328270 KCNQ3O43525 872 aa28.59■■■□□ 2.17
TNRC18-201ENST00000328270 CYP19A1P11511 503 aaPredicted RBP28.59■■■□□ 2.17
TNRC18-201ENST00000328270 INTS5Q6P9B9 1019 aaKnown RBP28.59■■■□□ 2.17
TNRC18-201ENST00000328270 CCDC146Q8IYE0 955 aa28.59■■■□□ 2.17
TNRC18-201ENST00000328270 CCDC87Q9NVE4 849 aa28.59■■■□□ 2.17
TNRC18-201ENST00000328270 KDM3BQ7LBC6 1761 aa28.58■■■□□ 2.17
TNRC18-201ENST00000328270 FMNL2Q96PY5 1086 aa28.58■■■□□ 2.17
TNRC18-201ENST00000328270 ADAMTS8Q9UP79 889 aa28.58■■■□□ 2.17
TNRC18-201ENST00000328270 ARHGEF1Q92888 912 aaKnown RBP28.57■■■□□ 2.16
TNRC18-201ENST00000328270 ANP32CO43423 234 aa28.55■■■□□ 2.16
TNRC18-201ENST00000328270 TMPOP42166 694 aaKnown RBP28.55■■■□□ 2.16
TNRC18-201ENST00000328270 TAF7Q15545 349 aaPredicted RBP28.55■■■□□ 2.16
TNRC18-201ENST00000328270 SYT17Q9BSW7 474 aa28.55■■■□□ 2.16
TNRC18-201ENST00000328270 THUMPD2Q9BTF0 503 aaKnown RBP28.55■■■□□ 2.16
TNRC18-201ENST00000328270 RFC4P35249 363 aa28.54■■■□□ 2.16
TNRC18-201ENST00000328270 RIPK4P57078 832 aa28.54■■■□□ 2.16
TNRC18-201ENST00000328270 RUNDC1Q96C34 613 aa28.54■■■□□ 2.16
TNRC18-201ENST00000328270 SOS1Q07889 1333 aaPredicted RBP28.53■■■□□ 2.16
TNRC18-201ENST00000328270 STARD3NLO95772 234 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms