RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 ADGRB2O60241 1585 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 NUCB1Q02818 461 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 DMTNQ08495 405 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 PKP1Q13835 747 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 MORC1Q86VD1 984 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 CHD1LQ86WJ1 897 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 TMEM57Q8N5G2 664 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 TSC1Q92574 1164 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 CD163L1Q9NR16 1453 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 LMBRD1Q9NUN5 540 aa9.04□□□□□ -0.96
CLRN1-202ENST00000327047 PRPF40AO75400 957 aaKnown RBP9.03□□□□□ -0.96
CLRN1-202ENST00000327047 DNTTIP2Q5QJE6 756 aaKnown RBP9.03□□□□□ -0.96
CLRN1-202ENST00000327047 CLEC17AQ6ZS10 378 aa9.03□□□□□ -0.96
CLRN1-202ENST00000327047 SSH1Q8WYL5 1049 aa9.03□□□□□ -0.96
CLRN1-202ENST00000327047 NOB1Q9ULX3 412 aaKnown RBP9.03□□□□□ -0.96
CLRN1-202ENST00000327047 DCCP43146 1447 aa9.03□□□□□ -0.96
CLRN1-202ENST00000327047 ZSCAN20P17040 1043 aaPredicted RBP9.02□□□□□ -0.96
CLRN1-202ENST00000327047 CBX1P83916 185 aa9.02□□□□□ -0.96
CLRN1-202ENST00000327047 EXOSC9Q06265 439 aaKnown RBP9.02□□□□□ -0.96
CLRN1-202ENST00000327047 ANKRD45Q5TZF3 282 aa9.02□□□□□ -0.96
CLRN1-202ENST00000327047 ATF7IPQ6VMQ6 1270 aa9.02□□□□□ -0.96
CLRN1-202ENST00000327047 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.96
CLRN1-202ENST00000327047 RNF214Q8ND24 703 aa9.02□□□□□ -0.96
CLRN1-202ENST00000327047 RREB1Q92766 1687 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 SYCE3A1L190 88 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 GIGYF1O75420 1035 aaPredicted RBP9.02□□□□□ -0.97
CLRN1-202ENST00000327047 BAG6P46379 1132 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 MTHFSP49914 203 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 BMP2KLQ5H9B9 411 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 CHAMP1Q96JM3 812 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 RIMS2Q9UQ26 1411 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 A0A1W2PP64 1363 aa9.02□□□□□ -0.97
CLRN1-202ENST00000327047 CAMTA1Q9Y6Y1 1673 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 MINK1Q8N4C8 1332 aaPredicted RBP9.01□□□□□ -0.97
CLRN1-202ENST00000327047 KIF16BQ96L93 1317 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 PTMAP06454 111 aaKnown RBP9.01□□□□□ -0.97
CLRN1-202ENST00000327047 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
CLRN1-202ENST00000327047 MPNDQ8N594 471 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 GPT2Q8TD30 523 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 CCDC39Q9UFE4 941 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 PNPLA6Q8IY17 1366 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 ABCC11Q96J66 1382 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 CDK11BP21127 795 aaKnown RBP9.01□□□□□ -0.97
CLRN1-202ENST00000327047 UTP14CQ5TAP6 766 aaKnown RBP9.01□□□□□ -0.97
CLRN1-202ENST00000327047 AEBP1Q8IUX7 1158 aa9.01□□□□□ -0.97
CLRN1-202ENST00000327047 TNS1Q9HBL0 1735 aaKnown RBP9□□□□□ -0.97
CLRN1-202ENST00000327047 FAM177BA6PVY3 158 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 U2AF1L5P0DN76 240 aaPredicted RBP9□□□□□ -0.97
CLRN1-202ENST00000327047 MCM5P33992 734 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 U2AF1Q01081 240 aaKnown RBP eCLIP9□□□□□ -0.97
CLRN1-202ENST00000327047 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
CLRN1-202ENST00000327047 NSD2O96028 1365 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 FYB1O15117 783 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 NUCB2P80303 420 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 CCDC27Q2M243 656 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 WAPLQ7Z5K2 1190 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 CDK19Q9BWU1 502 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 TMEM63CQ9P1W3 806 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 NSFL1CQ9UNZ2 370 aaKnown RBP9□□□□□ -0.97
CLRN1-202ENST00000327047 AATKQ6ZMQ8 1374 aa9□□□□□ -0.97
CLRN1-202ENST00000327047 NRXN3Q9Y4C0 1643 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 SRPK2P78362 688 aaKnown RBP8.99□□□□□ -0.97
CLRN1-202ENST00000327047 KIAA2012Q0VF49 1180 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 LRSAM1Q6UWE0 723 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 U3KPZ7 1027 aaPredicted RBP8.99□□□□□ -0.97
CLRN1-202ENST00000327047 DLC1Q96QB1 1528 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 MYRIPQ8NFW9 859 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 STAG3Q9UJ98 1225 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 METP08581 1390 aa8.99□□□□□ -0.97
CLRN1-202ENST00000327047 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
CLRN1-202ENST00000327047 ZGPATQ8N5A5 531 aaKnown RBP8.98□□□□□ -0.97
CLRN1-202ENST00000327047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLRN1-202ENST00000327047 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
CLRN1-202ENST00000327047 ZNF830Q96NB3 372 aaPredicted RBP8.98□□□□□ -0.97
CLRN1-202ENST00000327047 C8orf37Q96NL8 207 aa8.98□□□□□ -0.97
CLRN1-202ENST00000327047 GGNBP2Q9H3C7 697 aa8.98□□□□□ -0.97
CLRN1-202ENST00000327047 CABP1Q9NZU7 370 aa8.98□□□□□ -0.97
CLRN1-202ENST00000327047 SEMA3EO15041 775 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 CYP2E1P05181 493 aaPredicted RBP8.97□□□□□ -0.97
CLRN1-202ENST00000327047 ATP2B3Q16720 1220 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 DHX37Q8IY37 1157 aaKnown RBP8.97□□□□□ -0.97
CLRN1-202ENST00000327047 LRRC59Q96AG4 307 aaKnown RBP8.97□□□□□ -0.97
CLRN1-202ENST00000327047 CFAP53Q96M91 514 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 USP21Q9UK80 565 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 EID1Q9Y6B2 187 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 GLI3P10071 1580 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 COL3A1P02461 1466 aaPredicted RBP8.97□□□□□ -0.97
CLRN1-202ENST00000327047 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
CLRN1-202ENST00000327047 CT47B1P0C2W7 299 aaPredicted RBP8.97□□□□□ -0.97
CLRN1-202ENST00000327047 PLCD3Q8N3E9 789 aa8.97□□□□□ -0.97
CLRN1-202ENST00000327047 CDC45O75419 566 aa8.96□□□□□ -0.98
CLRN1-202ENST00000327047 RABEP1Q15276 862 aa8.96□□□□□ -0.98
CLRN1-202ENST00000327047 C17orf53Q8N3J3 647 aaPredicted RBP8.96□□□□□ -0.98
CLRN1-202ENST00000327047 DEFB132Q7Z7B7 95 aa8.95□□□□□ -0.98
CLRN1-202ENST00000327047 TERF2IPQ9NYB0 399 aa8.95□□□□□ -0.98
CLRN1-202ENST00000327047 ZDHHC9Q9Y397 364 aa8.95□□□□□ -0.98
CLRN1-202ENST00000327047 NUP188Q5SRE5 1749 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms