RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
SSBP3-201ENST00000326956 MX1P20591 662 aa17.73■□□□□ 0.43
SSBP3-201ENST00000326956 INTS4Q96HW7 963 aaKnown RBP17.72■□□□□ 0.43
SSBP3-201ENST00000326956 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.72■□□□□ 0.43
SSBP3-201ENST00000326956 SOX12O15370 315 aa17.72■□□□□ 0.43
SSBP3-201ENST00000326956 ANAPC15P60006 121 aa17.72■□□□□ 0.43
SSBP3-201ENST00000326956 DNTTIP2Q5QJE6 756 aaKnown RBP17.72■□□□□ 0.43
SSBP3-201ENST00000326956 CUL4AQ13619 759 aa17.71■□□□□ 0.43
SSBP3-201ENST00000326956 G2E3Q7L622 706 aa17.71■□□□□ 0.43
SSBP3-201ENST00000326956 GNAI3P08754 354 aa17.71■□□□□ 0.43
SSBP3-201ENST00000326956 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
SSBP3-201ENST00000326956 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
SSBP3-201ENST00000326956 CPS1P31327 1500 aa17.7■□□□□ 0.42
SSBP3-201ENST00000326956 CHMLP26374 656 aa17.69■□□□□ 0.42
SSBP3-201ENST00000326956 KIAA2012Q0VF49 1180 aa17.69■□□□□ 0.42
SSBP3-201ENST00000326956 FKBP5Q13451 457 aaPredicted RBP17.69■□□□□ 0.42
SSBP3-201ENST00000326956 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
SSBP3-201ENST00000326956 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
SSBP3-201ENST00000326956 SRCIN1Q9C0H9 1055 aa17.68■□□□□ 0.42
SSBP3-201ENST00000326956 GDPD2Q9HCC8 539 aa17.68■□□□□ 0.42
SSBP3-201ENST00000326956 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
SSBP3-201ENST00000326956 HSP90AB2PQ58FF8 381 aa17.68■□□□□ 0.42
SSBP3-201ENST00000326956 MTERF4Q7Z6M4 381 aaKnown RBP17.68■□□□□ 0.42
SSBP3-201ENST00000326956 TPRNQ4KMQ1 711 aa17.68■□□□□ 0.42
SSBP3-201ENST00000326956 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
SSBP3-201ENST00000326956 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
SSBP3-201ENST00000326956 MLECQ14165 292 aa17.66■□□□□ 0.42
SSBP3-201ENST00000326956 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
SSBP3-201ENST00000326956 A2ML1A8K2U0 1454 aa17.66■□□□□ 0.42
SSBP3-201ENST00000326956 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
SSBP3-201ENST00000326956 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
SSBP3-201ENST00000326956 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
SSBP3-201ENST00000326956 FOXO3O43524 673 aa17.65■□□□□ 0.42
SSBP3-201ENST00000326956 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
SSBP3-201ENST00000326956 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
SSBP3-201ENST00000326956 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
SSBP3-201ENST00000326956 SSH2Q76I76 1423 aa17.64■□□□□ 0.42
SSBP3-201ENST00000326956 METP08581 1390 aa17.64■□□□□ 0.41
SSBP3-201ENST00000326956 RICTORQ6R327 1708 aa17.64■□□□□ 0.41
SSBP3-201ENST00000326956 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
SSBP3-201ENST00000326956 FLIIQ13045 1269 aa17.64■□□□□ 0.41
SSBP3-201ENST00000326956 ARID3AQ99856 593 aa17.64■□□□□ 0.41
SSBP3-201ENST00000326956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.412e-6■■■□□ 16.4
SSBP3-201ENST00000326956 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-201ENST00000326956 CRB1P82279 1406 aa17.63■□□□□ 0.41
SSBP3-201ENST00000326956 MTHFSDQ2M296 383 aaKnown RBP17.63■□□□□ 0.41
SSBP3-201ENST00000326956 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
SSBP3-201ENST00000326956 MPNDQ8N594 471 aa17.62■□□□□ 0.41
SSBP3-201ENST00000326956 LRRFIP2Q9Y608 721 aaKnown RBP17.62■□□□□ 0.41
SSBP3-201ENST00000326956 SALL3Q9BXA9 1300 aa17.62■□□□□ 0.41
SSBP3-201ENST00000326956 CCDC183Q5T5S1 534 aa17.62■□□□□ 0.41
SSBP3-201ENST00000326956 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
SSBP3-201ENST00000326956 IL1RAPL2Q9NP60 686 aa17.62■□□□□ 0.41
SSBP3-201ENST00000326956 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
SSBP3-201ENST00000326956 LETM1O95202 739 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-201ENST00000326956 STAP2Q9UGK3 403 aa17.61■□□□□ 0.41
SSBP3-201ENST00000326956 ACEP12821 1306 aa17.61■□□□□ 0.41
SSBP3-201ENST00000326956 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
SSBP3-201ENST00000326956 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-201ENST00000326956 PLCB2Q00722 1185 aa17.61■□□□□ 0.41
SSBP3-201ENST00000326956 USP25Q9UHP3 1055 aa17.61■□□□□ 0.41
SSBP3-201ENST00000326956 UNC5CLQ8IV45 518 aa17.6■□□□□ 0.41
SSBP3-201ENST00000326956 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
SSBP3-201ENST00000326956 SIRT1Q96EB6 747 aa17.6■□□□□ 0.41
SSBP3-201ENST00000326956 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
SSBP3-201ENST00000326956 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 NUTM1Q86Y26 1132 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-201ENST00000326956 MON2Q7Z3U7 1717 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 EPB41L2O43491 1005 aaKnown RBP17.59■□□□□ 0.41
SSBP3-201ENST00000326956 MAP4K4O95819 1239 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-201ENST00000326956 HSPA4P34932 840 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 AMPHP49418 695 aa17.59■□□□□ 0.41
SSBP3-201ENST00000326956 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.41
SSBP3-201ENST00000326956 SMC3Q9UQE7 1217 aa17.58■□□□□ 0.41
SSBP3-201ENST00000326956 AOX1Q06278 1338 aa17.58■□□□□ 0.41
SSBP3-201ENST00000326956 ADCY5O95622 1261 aa17.58■□□□□ 0.4
SSBP3-201ENST00000326956 CNPY2Q9Y2B0 182 aa17.58■□□□□ 0.4
SSBP3-201ENST00000326956 ITSN1Q15811 1721 aa17.58■□□□□ 0.4
SSBP3-201ENST00000326956 ZSCAN22P10073 491 aaPredicted RBP17.58■□□□□ 0.4
SSBP3-201ENST00000326956 ZNF830Q96NB3 372 aaPredicted RBP17.58■□□□□ 0.4
SSBP3-201ENST00000326956 ARHGEF10O15013 1369 aa17.57■□□□□ 0.4
SSBP3-201ENST00000326956 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
SSBP3-201ENST00000326956 HMGN5P82970 282 aaKnown RBP17.57■□□□□ 0.4
SSBP3-201ENST00000326956 FIBPO43427 364 aa17.57■□□□□ 0.4
SSBP3-201ENST00000326956 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-201ENST00000326956 UBE2HP62256 183 aa17.57■□□□□ 0.4
SSBP3-201ENST00000326956 C3P01024 1663 aa17.57■□□□□ 0.4
SSBP3-201ENST00000326956 STX6O43752 255 aa17.56■□□□□ 0.4
SSBP3-201ENST00000326956 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
SSBP3-201ENST00000326956 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
SSBP3-201ENST00000326956 RAB11FIP3O75154 756 aa17.56■□□□□ 0.4
SSBP3-201ENST00000326956 NOLC1Q14978 699 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSBP3-201ENST00000326956 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
SSBP3-201ENST00000326956 PRIMPOLQ96LW4 560 aa17.55■□□□□ 0.4
SSBP3-201ENST00000326956 LIMCH1Q9UPQ0 1083 aa17.55■□□□□ 0.4
SSBP3-201ENST00000326956 TMEM87AQ8NBN3 555 aa17.55■□□□□ 0.4
SSBP3-201ENST00000326956 MYRIPQ8NFW9 859 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 297.9 ms