RNA–Protein interactions for RNA: ENST00000325509.4

MSC-201, Transcript of musculin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSC, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-201ENST00000325509 ITGB4P16144 1822 aa23.81■■□□□ 1.4
MSC-201ENST00000325509 SLC39A6Q13433 755 aa23.8■■□□□ 1.4
MSC-201ENST00000325509 CCNL1Q9UK58 526 aaPredicted RBP23.8■■□□□ 1.4
MSC-201ENST00000325509 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
MSC-201ENST00000325509 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
MSC-201ENST00000325509 R3HDM1Q15032 1099 aaKnown RBP23.79■■□□□ 1.4
MSC-201ENST00000325509 NEUROD2Q15784 382 aa23.79■■□□□ 1.4
MSC-201ENST00000325509 RTF1Q92541 710 aaKnown RBP23.79■■□□□ 1.4
MSC-201ENST00000325509 SMARCC1Q92922 1105 aaPredicted RBP23.78■■□□□ 1.4
MSC-201ENST00000325509 THUMPD2Q9BTF0 503 aaKnown RBP23.78■■□□□ 1.4
MSC-201ENST00000325509 CEMIPQ8WUJ3 1361 aa23.78■■□□□ 1.4
MSC-201ENST00000325509 LOC102724428A0A0B4J2F2 783 aa23.77■■□□□ 1.4
MSC-201ENST00000325509 TMPOP42166 694 aaKnown RBP23.77■■□□□ 1.4
MSC-201ENST00000325509 SIK1P57059 783 aa23.77■■□□□ 1.4
MSC-201ENST00000325509 SLC27A3Q5K4L6 730 aa23.77■■□□□ 1.4
MSC-201ENST00000325509 SLC4A9Q96Q91 983 aa23.77■■□□□ 1.4
MSC-201ENST00000325509 PTCD1O75127 700 aaKnown RBP23.77■■□□□ 1.4
MSC-201ENST00000325509 RIPK4P57078 832 aa23.77■■□□□ 1.4
MSC-201ENST00000325509 TEFQ10587 303 aa23.77■■□□□ 1.4
MSC-201ENST00000325509 RREB1Q92766 1687 aa23.76■■□□□ 1.39
MSC-201ENST00000325509 RBM42Q9BTD8 480 aaKnown RBP23.76■■□□□ 1.39
MSC-201ENST00000325509 NBPF14Q5TI25 921 aa23.75■■□□□ 1.39
MSC-201ENST00000325509 RGPD3A6NKT7 1758 aaPredicted RBP23.74■■□□□ 1.39
MSC-201ENST00000325509 RGPD4Q7Z3J3 1758 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 ZNF827Q17R98 1081 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 NUP188Q5SRE5 1749 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 ADAMTS7Q9UKP4 1686 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 HTATSF1O43719 755 aaKnown RBP23.74■■□□□ 1.39
MSC-201ENST00000325509 ITPK1Q13572 414 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 MRC1P22897 1456 aa23.74■■□□□ 1.39
MSC-201ENST00000325509 APAF1O14727 1248 aa23.73■■□□□ 1.39
MSC-201ENST00000325509 ATP6V1AP38606 617 aa23.73■■□□□ 1.39
MSC-201ENST00000325509 FAM9BQ8IZU0 186 aa23.73■■□□□ 1.39
MSC-201ENST00000325509 PDGFDQ9GZP0 370 aaPredicted RBP23.72■■□□□ 1.39
MSC-201ENST00000325509 GTF3C3Q9Y5Q9 886 aa23.72■■□□□ 1.39
MSC-201ENST00000325509 KCNQ3O43525 872 aa23.72■■□□□ 1.39
MSC-201ENST00000325509 SLC15A2Q16348 729 aa23.72■■□□□ 1.39
MSC-201ENST00000325509 MIS18AQ9NYP9 233 aa23.72■■□□□ 1.39
MSC-201ENST00000325509 LY75O60449 1722 aa23.7■■□□□ 1.38
MSC-201ENST00000325509 BTBD11A6QL63 1104 aa23.7■■□□□ 1.38
MSC-201ENST00000325509 LINC00116Q8NCU8 138 aa23.7■■□□□ 1.38
MSC-201ENST00000325509 AKT1S1Q96B36 256 aa23.7■■□□□ 1.38
MSC-201ENST00000325509 TRIM35Q9UPQ4 493 aa23.7■■□□□ 1.38
MSC-201ENST00000325509 STK32BQ9NY57 414 aa23.69■■□□□ 1.38
MSC-201ENST00000325509 ZNF790Q6PG37 636 aa23.69■■□□□ 1.38
MSC-201ENST00000325509 SMIM5Q71RC9 77 aa23.69■■□□□ 1.38
MSC-201ENST00000325509 AMIGO3Q86WK7 504 aa23.67■■□□□ 1.38
MSC-201ENST00000325509 TAF7Q15545 349 aaPredicted RBP23.66■■□□□ 1.38
MSC-201ENST00000325509 ZNF496Q96IT1 587 aaPredicted RBP23.66■■□□□ 1.38
MSC-201ENST00000325509 TTC5Q8N0Z6 440 aa23.66■■□□□ 1.38
MSC-201ENST00000325509 PAPPAQ13219 1627 aa23.65■■□□□ 1.38
MSC-201ENST00000325509 TFCP2L1Q9NZI6 479 aa23.65■■□□□ 1.38
MSC-201ENST00000325509 DLG5Q8TDM6 1919 aa23.64■■□□□ 1.37
MSC-201ENST00000325509 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
MSC-201ENST00000325509 DNAJC10Q8IXB1 793 aa23.63■■□□□ 1.37
MSC-201ENST00000325509 KCPQ6ZWJ8 1503 aa23.63■■□□□ 1.37
MSC-201ENST00000325509 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
MSC-201ENST00000325509 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
MSC-201ENST00000325509 SALL2Q9Y467 1007 aaPredicted RBP23.61■■□□□ 1.37
MSC-201ENST00000325509 PRAMEF22A3QJZ6 481 aa23.6■■□□□ 1.37
MSC-201ENST00000325509 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
MSC-201ENST00000325509 SIPA1L3O60292 1781 aaPredicted RBP23.59■■□□□ 1.37
MSC-201ENST00000325509 AK7Q96M32 723 aa23.59■■□□□ 1.37
MSC-201ENST00000325509 GNPATO15228 680 aa23.58■■□□□ 1.37
MSC-201ENST00000325509 PHF14O94880 888 aa23.58■■□□□ 1.37
MSC-201ENST00000325509 FMNL2Q96PY5 1086 aa23.58■■□□□ 1.37
MSC-201ENST00000325509 LAS1LQ9Y4W2 734 aaKnown RBP23.58■■□□□ 1.37
MSC-201ENST00000325509 HEG1Q9ULI3 1381 aa23.58■■□□□ 1.36
MSC-201ENST00000325509 CRKLP46109 303 aaKnown RBP23.57■■□□□ 1.36
MSC-201ENST00000325509 COL23A1Q86Y22 540 aaPredicted RBP23.57■■□□□ 1.36
MSC-201ENST00000325509 C5P01031 1676 aa23.57■■□□□ 1.36
MSC-201ENST00000325509 ZBTB7AO95365 584 aa23.57■■□□□ 1.36
MSC-201ENST00000325509 CYP19A1P11511 503 aaPredicted RBP23.57■■□□□ 1.36
MSC-201ENST00000325509 VSIG10Q8N0Z9 540 aa23.57■■□□□ 1.36
MSC-201ENST00000325509 C4BP0C0L5 1744 aa23.56■■□□□ 1.36
MSC-201ENST00000325509 TSPYL4Q9UJ04 414 aa23.56■■□□□ 1.36
MSC-201ENST00000325509 INTS5Q6P9B9 1019 aaKnown RBP23.55■■□□□ 1.36
MSC-201ENST00000325509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.55■■□□□ 1.36
MSC-201ENST00000325509 USP16Q9Y5T5 823 aa23.55■■□□□ 1.36
MSC-201ENST00000325509 MSH5O43196 834 aa23.54■■□□□ 1.36
MSC-201ENST00000325509 TAF1LQ8IZX4 1826 aa23.54■■□□□ 1.36
MSC-201ENST00000325509 EIF4A1P60842 406 aaKnown RBP23.54■■□□□ 1.36
MSC-201ENST00000325509 RC3H1Q5TC82 1133 aaKnown RBP23.54■■□□□ 1.36
MSC-201ENST00000325509 CNTNAP4Q9C0A0 1308 aa23.53■■□□□ 1.36
MSC-201ENST00000325509 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
MSC-201ENST00000325509 CHL1O00533 1208 aa23.52■■□□□ 1.36
MSC-201ENST00000325509 ATF5Q9Y2D1 282 aaPredicted RBP23.52■■□□□ 1.36
MSC-201ENST00000325509 UBR2Q8IWV8 1755 aa23.52■■□□□ 1.36
MSC-201ENST00000325509 ZBTB1Q9Y2K1 713 aa23.52■■□□□ 1.36
MSC-201ENST00000325509 RTCBQ9Y3I0 505 aaKnown RBP23.52■■□□□ 1.36
MSC-201ENST00000325509 TJP1Q07157 1748 aa23.51■■□□□ 1.35
MSC-201ENST00000325509 HMGB2P26583 209 aaKnown RBP23.51■■□□□ 1.35
MSC-201ENST00000325509 A1BGP04217 495 aa23.5■■□□□ 1.35
MSC-201ENST00000325509 SNRPA1P09661 255 aaKnown RBP23.5■■□□□ 1.35
MSC-201ENST00000325509 KRT24Q2M2I5 525 aa23.5■■□□□ 1.35
MSC-201ENST00000325509 CCDC87Q9NVE4 849 aa23.5■■□□□ 1.35
MSC-201ENST00000325509 ZNF831Q5JPB2 1677 aa23.5■■□□□ 1.35
MSC-201ENST00000325509 RPS6KA4O75676 772 aa23.5■■□□□ 1.35
MSC-201ENST00000325509 STARD3NLO95772 234 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms