RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 CTR9Q6PD62 1173 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
NUP98-201ENST00000324932 CCDC178Q5BJE1 867 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 SSFA2P28290 1259 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
NUP98-201ENST00000324932 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 GPATCH11Q8N954 259 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 TRMT1Q9NXH9 659 aaKnown RBP16.97■□□□□ 0.31
NUP98-201ENST00000324932 LMAN1P49257 510 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 ALS2CR12Q96Q35 445 aa16.97■□□□□ 0.31
NUP98-201ENST00000324932 KLHL10Q6JEL2 608 aa16.96■□□□□ 0.31
NUP98-201ENST00000324932 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
NUP98-201ENST00000324932 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
NUP98-201ENST00000324932 ZHX1Q9UKY1 873 aaPredicted RBP16.96■□□□□ 0.31
NUP98-201ENST00000324932 SNW1Q13573 536 aaKnown RBP16.96■□□□□ 0.31
NUP98-201ENST00000324932 PRPF40BQ6NWY9 871 aaKnown RBP16.96■□□□□ 0.31
NUP98-201ENST00000324932 CCDC196A0A1B0GTZ2 297 aa16.96■□□□□ 0.3
NUP98-201ENST00000324932 CEP63Q96MT8 703 aa16.96■□□□□ 0.3
NUP98-201ENST00000324932 KIF20AO95235 890 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 KRT222Q8N1A0 295 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
NUP98-201ENST00000324932 HMGB1P09429 215 aaKnown RBP16.95■□□□□ 0.3
NUP98-201ENST00000324932 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 HOOK3Q86VS8 718 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 C8orf76Q96K31 380 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
NUP98-201ENST00000324932 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
NUP98-201ENST00000324932 PPM1EQ8WY54 764 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 LIMCH1Q9UPQ0 1083 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 ADCY5O95622 1261 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 ZNF76P36508 570 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 UBE2Q2Q8WVN8 375 aa16.95■□□□□ 0.3
NUP98-201ENST00000324932 FCHSD2O94868 740 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 STX1AQ16623 288 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 MNAT1P51948 309 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
NUP98-201ENST00000324932 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
NUP98-201ENST00000324932 SPATA24Q86W54 205 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 CCDC150Q8NCX0 1101 aa16.94■□□□□ 0.3
NUP98-201ENST00000324932 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.35e-6■□□□□ 9.5
NUP98-201ENST00000324932 ANAPC15P60006 121 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 SLC12A5Q9H2X9 1139 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 KLHL40Q2TBA0 621 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 C6orf163Q5TEZ5 329 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
NUP98-201ENST00000324932 IVLP07476 585 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 UBE4AQ14139 1066 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
NUP98-201ENST00000324932 ZMYND15Q9H091 742 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 CCDC171Q6TFL3 1326 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 TRIM21P19474 475 aaKnown RBP16.92■□□□□ 0.3
NUP98-201ENST00000324932 CEP135Q66GS9 1140 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
NUP98-201ENST00000324932 CEP112Q8N8E3 955 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 CNNM3Q8NE01 707 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 EHBP1Q8NDI1 1231 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
NUP98-201ENST00000324932 RAB34Q9BZG1 259 aa16.91■□□□□ 0.3
NUP98-201ENST00000324932 CLCN1P35523 988 aa16.91■□□□□ 0.3
NUP98-201ENST00000324932 CABP4P57796 275 aa16.91■□□□□ 0.3
NUP98-201ENST00000324932 FSIP1Q8NA03 581 aa16.91■□□□□ 0.3
NUP98-201ENST00000324932 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
NUP98-201ENST00000324932 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
NUP98-201ENST00000324932 ZNF165P49910 485 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 DNAI2Q9GZS0 605 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 MAATS1Q7Z4T9 603 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 ZNF287Q9HBT7 754 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 HSPA4P34932 840 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
NUP98-201ENST00000324932 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.3
NUP98-201ENST00000324932 SPG7Q9UQ90 795 aa16.89■□□□□ 0.29
NUP98-201ENST00000324932 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
NUP98-201ENST00000324932 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
NUP98-201ENST00000324932 GNG11P61952 73 aa16.89■□□□□ 0.29
NUP98-201ENST00000324932 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
NUP98-201ENST00000324932 FSD2A1L4K1 749 aa16.88■□□□□ 0.29
NUP98-201ENST00000324932 DNA2P51530 1060 aa16.88■□□□□ 0.29
NUP98-201ENST00000324932 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
NUP98-201ENST00000324932 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
NUP98-201ENST00000324932 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
NUP98-201ENST00000324932 CCDC12Q8WUD4 166 aaPredicted RBP16.88■□□□□ 0.29
NUP98-201ENST00000324932 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
NUP98-201ENST00000324932 AKAP2Q9Y2D5 859 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 429.5 ms