RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 CHPF2Q9P2E5 772 aa11.48□□□□□ -0.57
CD46-202ENST00000322918 FLIIQ13045 1269 aa11.47□□□□□ -0.57
CD46-202ENST00000322918 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
CD46-202ENST00000322918 CCDC30Q5VVM6 783 aa11.47□□□□□ -0.57
CD46-202ENST00000322918 LARP1Q6PKG0 1096 aaKnown RBP11.47□□□□□ -0.57
CD46-202ENST00000322918 HTATSF1O43719 755 aaKnown RBP11.46□□□□□ -0.57
CD46-202ENST00000322918 MYL6BP14649 208 aa11.46□□□□□ -0.58
CD46-202ENST00000322918 EIF4A1P60842 406 aaKnown RBP11.46□□□□□ -0.58
CD46-202ENST00000322918 RGPD5Q99666 1765 aa11.46□□□□□ -0.58
CD46-202ENST00000322918 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 ARHGAP45Q92619 1136 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 BTG4Q9NY30 223 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 ABCC4O15439 1325 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 DCCP43146 1447 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 CYP27B1O15528 508 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 SIRT2Q8IXJ6 389 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
CD46-202ENST00000322918 SEC24BO95487 1268 aa11.44□□□□□ -0.58
CD46-202ENST00000322918 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
CD46-202ENST00000322918 UBE2Q2Q8WVN8 375 aa11.44□□□□□ -0.58
CD46-202ENST00000322918 KAT6BQ8WYB5 2073 aa11.44□□□□□ -0.58
CD46-202ENST00000322918 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
CD46-202ENST00000322918 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
CD46-202ENST00000322918 PTCD1O75127 700 aaKnown RBP11.44□□□□□ -0.58
CD46-202ENST00000322918 C8orf34Q49A92 452 aa11.44□□□□□ -0.58
CD46-202ENST00000322918 TRPM3Q9HCF6 1732 aaPredicted RBP11.44□□□□□ -0.58
CD46-202ENST00000322918 SMARCA5O60264 1052 aaPredicted RBP11.43□□□□□ -0.58
CD46-202ENST00000322918 PHKG2P15735 406 aa11.43□□□□□ -0.58
CD46-202ENST00000322918 SLIT3O75094 1523 aa11.43□□□□□ -0.58
CD46-202ENST00000322918 MEGF6O75095 1541 aa11.43□□□□□ -0.58
CD46-202ENST00000322918 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
CD46-202ENST00000322918 ARXQ96QS3 562 aa11.43□□□□□ -0.58
CD46-202ENST00000322918 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
CD46-202ENST00000322918 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
CD46-202ENST00000322918 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
CD46-202ENST00000322918 CCDC9Q9Y3X0 531 aaKnown RBP11.42□□□□□ -0.58
CD46-202ENST00000322918 KIF1AQ12756 1690 aa11.42□□□□□ -0.58
CD46-202ENST00000322918 CABP4P57796 275 aa11.42□□□□□ -0.58
CD46-202ENST00000322918 SYTL4Q96C24 671 aaPredicted RBP11.42□□□□□ -0.58
CD46-202ENST00000322918 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
CD46-202ENST00000322918 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
CD46-202ENST00000322918 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
CD46-202ENST00000322918 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
CD46-202ENST00000322918 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
CD46-202ENST00000322918 HDAC1Q13547 482 aaPredicted RBP11.41□□□□□ -0.58
CD46-202ENST00000322918 ZNF496Q96IT1 587 aaPredicted RBP11.41□□□□□ -0.58
CD46-202ENST00000322918 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
CD46-202ENST00000322918 PTPRCP08575 1304 aa11.41□□□□□ -0.58
CD46-202ENST00000322918 INTS3Q68E01 1043 aaKnown RBP11.41□□□□□ -0.58
CD46-202ENST00000322918 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
CD46-202ENST00000322918 JARID2Q92833 1246 aaPredicted RBP11.41□□□□□ -0.58
CD46-202ENST00000322918 ZNF790Q6PG37 636 aa11.4□□□□□ -0.58
CD46-202ENST00000322918 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
CD46-202ENST00000322918 EXOC6BQ9Y2D4 811 aa11.4□□□□□ -0.58
CD46-202ENST00000322918 AAMPQ13685 434 aa11.4□□□□□ -0.58
CD46-202ENST00000322918 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
CD46-202ENST00000322918 WDR17Q8IZU2 1322 aa11.4□□□□□ -0.58
CD46-202ENST00000322918 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.59
CD46-202ENST00000322918 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
CD46-202ENST00000322918 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
CD46-202ENST00000322918 USP16Q9Y5T5 823 aa11.39□□□□□ -0.59
CD46-202ENST00000322918 LRRFIP2Q9Y608 721 aaKnown RBP11.39□□□□□ -0.59
CD46-202ENST00000322918 RGS12O14924 1447 aa11.39□□□□□ -0.59
CD46-202ENST00000322918 MFAP1P55081 439 aaKnown RBP11.39□□□□□ -0.59
CD46-202ENST00000322918 CWF19L2Q2TBE0 894 aaKnown RBP11.39□□□□□ -0.59
CD46-202ENST00000322918 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
CD46-202ENST00000322918 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
CD46-202ENST00000322918 IL2RBP14784 551 aa11.38□□□□□ -0.59
CD46-202ENST00000322918 CEP85Q6P2H3 762 aa11.38□□□□□ -0.59
CD46-202ENST00000322918 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
CD46-202ENST00000322918 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
CD46-202ENST00000322918 CHMP4BQ9H444 224 aaKnown RBP11.38□□□□□ -0.59
CD46-202ENST00000322918 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
CD46-202ENST00000322918 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
CD46-202ENST00000322918 NUCB1Q02818 461 aa11.38□□□□□ -0.59
CD46-202ENST00000322918 PNMA6EA0A0J9YXQ4 647 aa11.37□□□□□ -0.59
CD46-202ENST00000322918 UBAP1LF5GYI3 381 aa11.37□□□□□ -0.59
CD46-202ENST00000322918 NBPF7P0C2Y1 421 aaPredicted RBP11.37□□□□□ -0.59
CD46-202ENST00000322918 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
CD46-202ENST00000322918 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
CD46-202ENST00000322918 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
CD46-202ENST00000322918 DBF4Q9UBU7 674 aaPredicted RBP11.37□□□□□ -0.59
CD46-202ENST00000322918 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
CD46-202ENST00000322918 GNAI2P04899 355 aa11.36□□□□□ -0.59
CD46-202ENST00000322918 DNAAF4Q8WXU2 420 aa11.36□□□□□ -0.59
CD46-202ENST00000322918 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 USP44Q9H0E7 712 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
CD46-202ENST00000322918 USP54Q70EL1 1684 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 COPS6Q7L5N1 327 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
CD46-202ENST00000322918 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
CD46-202ENST00000322918 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 CPDO75976 1380 aa11.35□□□□□ -0.59
CD46-202ENST00000322918 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
CD46-202ENST00000322918 GCC1Q96CN9 775 aa11.34□□□□□ -0.59
CD46-202ENST00000322918 PHRF1Q9P1Y6 1649 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms