RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
ZNF543-201ENST00000321545 ALDH1L2Q3SY69 923 aa14.1□□□□□ -0.15
ZNF543-201ENST00000321545 SRCIN1Q9C0H9 1055 aa14.1□□□□□ -0.15
ZNF543-201ENST00000321545 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
ZNF543-201ENST00000321545 CDC42BPGQ6DT37 1551 aa14.1□□□□□ -0.15
ZNF543-201ENST00000321545 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
ZNF543-201ENST00000321545 TRMT2AQ8IZ69 625 aaKnown RBP14.1□□□□□ -0.15
ZNF543-201ENST00000321545 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
ZNF543-201ENST00000321545 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.09□□□□□ -0.15
ZNF543-201ENST00000321545 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
ZNF543-201ENST00000321545 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
ZNF543-201ENST00000321545 TSHZ3Q63HK5 1081 aa14.09□□□□□ -0.15
ZNF543-201ENST00000321545 OVOS2A0A0J9YW53 1432 aa14.09□□□□□ -0.15
ZNF543-201ENST00000321545 OVOS2Q6IE36 1432 aa14.09□□□□□ -0.15
ZNF543-201ENST00000321545 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
ZNF543-201ENST00000321545 TAF7LQ5H9L4 462 aa14.08□□□□□ -0.16
ZNF543-201ENST00000321545 ZNF496Q96IT1 587 aaPredicted RBP14.08□□□□□ -0.16
ZNF543-201ENST00000321545 PKNOX2Q96KN3 472 aa14.08□□□□□ -0.16
ZNF543-201ENST00000321545 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
ZNF543-201ENST00000321545 KCNQ4P56696 695 aa14.08□□□□□ -0.16
ZNF543-201ENST00000321545 CWF19L2Q2TBE0 894 aaKnown RBP14.08□□□□□ -0.16
ZNF543-201ENST00000321545 MYD88Q99836 296 aa14.08□□□□□ -0.16
ZNF543-201ENST00000321545 MAP3K2Q9Y2U5 619 aa14.08□□□□□ -0.16
ZNF543-201ENST00000321545 LRRFIP2Q9Y608 721 aaKnown RBP14.08□□□□□ -0.16
ZNF543-201ENST00000321545 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
ZNF543-201ENST00000321545 GPTP24298 496 aa14.07□□□□□ -0.16
ZNF543-201ENST00000321545 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
ZNF543-201ENST00000321545 ARHGEF10O15013 1369 aa14.07□□□□□ -0.16
ZNF543-201ENST00000321545 LRRC7Q96NW7 1537 aa14.07□□□□□ -0.16
ZNF543-201ENST00000321545 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
ZNF543-201ENST00000321545 BICDL1Q6ZP65 573 aa14.06□□□□□ -0.16
ZNF543-201ENST00000321545 SRGAP3O43295 1099 aa14.06□□□□□ -0.16
ZNF543-201ENST00000321545 GNAI2P04899 355 aa14.06□□□□□ -0.16
ZNF543-201ENST00000321545 HSP90AB1P08238 724 aaKnown RBP14.06□□□□□ -0.16
ZNF543-201ENST00000321545 XAGE3Q8WTP9 111 aa14.06□□□□□ -0.16
ZNF543-201ENST00000321545 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 DDB1Q16531 1140 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 DBF4Q9UBU7 674 aaPredicted RBP14.05□□□□□ -0.16
ZNF543-201ENST00000321545 PROSER3Q2NL68 480 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 FMNL2Q96PY5 1086 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 MED14O60244 1454 aa14.05□□□□□ -0.16
ZNF543-201ENST00000321545 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
ZNF543-201ENST00000321545 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
ZNF543-201ENST00000321545 A1BGP04217 495 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 DNAAF4Q8WXU2 420 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
ZNF543-201ENST00000321545 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 USP19O94966 1318 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 PHKG2P15735 406 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 CYP27B1O15528 508 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 PRIM1P49642 420 aaKnown RBP14.04□□□□□ -0.16
ZNF543-201ENST00000321545 ARID3AQ99856 593 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
ZNF543-201ENST00000321545 CCT4P50991 539 aaKnown RBP14.03□□□□□ -0.16
ZNF543-201ENST00000321545 GNAI3P08754 354 aa14.03□□□□□ -0.16
ZNF543-201ENST00000321545 EIF4A1P60842 406 aaKnown RBP14.03□□□□□ -0.16
ZNF543-201ENST00000321545 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
ZNF543-201ENST00000321545 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
ZNF543-201ENST00000321545 DCAF5Q96JK2 942 aa14.02□□□□□ -0.16
ZNF543-201ENST00000321545 SLC52A2Q9HAB3 445 aa14.02□□□□□ -0.17
ZNF543-201ENST00000321545 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
ZNF543-201ENST00000321545 KCNJ4P48050 445 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 NUTM1Q86Y26 1132 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 GORABQ5T7V8 394 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 UBE3BQ7Z3V4 1068 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 CHD1LQ86WJ1 897 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 NEUROD6Q96NK8 337 aa14.01□□□□□ -0.17
ZNF543-201ENST00000321545 MST1RQ04912 1400 aa14□□□□□ -0.17
ZNF543-201ENST00000321545 ZNF853P0CG23 659 aa14□□□□□ -0.17
ZNF543-201ENST00000321545 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
ZNF543-201ENST00000321545 ZBTB40Q9NUA8 1239 aa14□□□□□ -0.17
ZNF543-201ENST00000321545 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
ZNF543-201ENST00000321545 CASC1Q6TDU7 716 aa14□□□□□ -0.17
ZNF543-201ENST00000321545 TNS3Q68CZ2 1445 aa13.99□□□□□ -0.17
ZNF543-201ENST00000321545 WDR17Q8IZU2 1322 aa13.99□□□□□ -0.17
ZNF543-201ENST00000321545 ZBTB7BO15156 539 aaPredicted RBP13.99□□□□□ -0.17
ZNF543-201ENST00000321545 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
ZNF543-201ENST00000321545 A0A087WZG4 1122 aa13.99□□□□□ -0.17
ZNF543-201ENST00000321545 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
ZNF543-201ENST00000321545 RGPD8O14715 1765 aaPredicted RBP13.98□□□□□ -0.17
ZNF543-201ENST00000321545 ANKRD13DQ6ZTN6 518 aa13.98□□□□□ -0.17
ZNF543-201ENST00000321545 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
ZNF543-201ENST00000321545 GIGYF1O75420 1035 aaPredicted RBP13.98□□□□□ -0.17
ZNF543-201ENST00000321545 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
ZNF543-201ENST00000321545 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
ZNF543-201ENST00000321545 A0A0U1RQG5 324 aaPredicted RBP13.97□□□□□ -0.17
ZNF543-201ENST00000321545 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
ZNF543-201ENST00000321545 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
ZNF543-201ENST00000321545 UBE2Q2Q8WVN8 375 aa13.97□□□□□ -0.17
ZNF543-201ENST00000321545 PHF14O94880 888 aa13.97□□□□□ -0.17
ZNF543-201ENST00000321545 KIF6Q6ZMV9 814 aa13.97□□□□□ -0.17
ZNF543-201ENST00000321545 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
ZNF543-201ENST00000321545 IFIT2P09913 472 aaKnown RBP13.97□□□□□ -0.17
ZNF543-201ENST00000321545 PTPRCP08575 1304 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms