RNA–Protein interactions for RNA: ENST00000319242.7

GFRA4-202, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GFRA4, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-202ENST00000319242 PHACTR3Q96KR7 559 aa35.75■■■■□ 3.31
GFRA4-202ENST00000319242 ATF5Q9Y2D1 282 aaPredicted RBP35.75■■■■□ 3.31
GFRA4-202ENST00000319242 C5P01031 1676 aa35.75■■■■□ 3.31
GFRA4-202ENST00000319242 ATP6V1AP38606 617 aa35.73■■■■□ 3.31
GFRA4-202ENST00000319242 MTFR1LQ9H019 292 aa35.73■■■■□ 3.31
GFRA4-202ENST00000319242 SLC52A2Q9HAB3 445 aa35.73■■■■□ 3.31
GFRA4-202ENST00000319242 TAF1LQ8IZX4 1826 aa35.73■■■■□ 3.31
GFRA4-202ENST00000319242 ITPK1Q13572 414 aa35.71■■■■□ 3.31
GFRA4-202ENST00000319242 RBM42Q9BTD8 480 aaKnown RBP35.71■■■■□ 3.31
GFRA4-202ENST00000319242 QSER1Q2KHR3 1735 aa35.71■■■■□ 3.31
GFRA4-202ENST00000319242 LINC00116Q8NCU8 138 aa35.7■■■■□ 3.31
GFRA4-202ENST00000319242 TUBGCP6Q96RT7 1819 aa35.69■■■■□ 3.3
GFRA4-202ENST00000319242 MAP3K5Q99683 1374 aa35.69■■■■□ 3.3
GFRA4-202ENST00000319242 GNAT3A8MTJ3 354 aa35.69■■■■□ 3.3
GFRA4-202ENST00000319242 MYBBP1AQ9BQG0 1328 aaKnown RBP35.68■■■■□ 3.3
GFRA4-202ENST00000319242 SLC16A10Q8TF71 515 aa35.68■■■■□ 3.3
GFRA4-202ENST00000319242 SLC4A9Q96Q91 983 aa35.68■■■■□ 3.3
GFRA4-202ENST00000319242 C4BP0C0L5 1744 aa35.67■■■■□ 3.3
GFRA4-202ENST00000319242 PTGER2P43116 358 aa35.67■■■■□ 3.3
GFRA4-202ENST00000319242 AK7Q96M32 723 aa35.67■■■■□ 3.3
GFRA4-202ENST00000319242 PPP1R1BQ9UD71 204 aaPredicted RBP35.67■■■■□ 3.3
GFRA4-202ENST00000319242 ADAMTS7Q9UKP4 1686 aa35.66■■■■□ 3.3
GFRA4-202ENST00000319242 COL23A1Q86Y22 540 aaPredicted RBP35.66■■■■□ 3.3
GFRA4-202ENST00000319242 ZNF316A6NFI3 1004 aaPredicted RBP35.65■■■■□ 3.3
GFRA4-202ENST00000319242 PTCD1O75127 700 aaKnown RBP35.65■■■■□ 3.3
GFRA4-202ENST00000319242 IL17REQ8NFR9 667 aa35.65■■■■□ 3.3
GFRA4-202ENST00000319242 MRC1P22897 1456 aa35.65■■■■□ 3.3
GFRA4-202ENST00000319242 VIRMAQ69YN4 1812 aaKnown RBP35.64■■■■□ 3.3
GFRA4-202ENST00000319242 MSH5O43196 834 aa35.63■■■■□ 3.29
GFRA4-202ENST00000319242 FLAD1Q8NFF5 587 aa35.62■■■■□ 3.29
GFRA4-202ENST00000319242 SGIP1Q9BQI5 828 aa35.61■■■■□ 3.29
GFRA4-202ENST00000319242 PRKRIP1Q9H875 184 aaPredicted RBP35.61■■■■□ 3.29
GFRA4-202ENST00000319242 SLC39A6Q13433 755 aa35.6■■■■□ 3.29
GFRA4-202ENST00000319242 AMIGO3Q86WK7 504 aa35.59■■■■□ 3.29
GFRA4-202ENST00000319242 ZNF831Q5JPB2 1677 aa35.59■■■■□ 3.29
GFRA4-202ENST00000319242 TEFQ10587 303 aa35.58■■■■□ 3.29
GFRA4-202ENST00000319242 NEFMP07197 916 aa35.57■■■■□ 3.28
GFRA4-202ENST00000319242 SMIM5Q71RC9 77 aa35.57■■■■□ 3.28
GFRA4-202ENST00000319242 GNPATO15228 680 aa35.56■■■■□ 3.28
GFRA4-202ENST00000319242 PHF14O94880 888 aa35.55■■■■□ 3.28
GFRA4-202ENST00000319242 PLEKHF1Q96S99 279 aa35.55■■■■□ 3.28
GFRA4-202ENST00000319242 CEMIPQ8WUJ3 1361 aa35.54■■■■□ 3.28
GFRA4-202ENST00000319242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.54■■■■□ 3.28
GFRA4-202ENST00000319242 SSFA2P28290 1259 aa35.54■■■■□ 3.28
GFRA4-202ENST00000319242 RTF1Q92541 710 aaKnown RBP35.54■■■■□ 3.28
GFRA4-202ENST00000319242 PNNQ9H307 717 aaKnown RBP35.54■■■■□ 3.28
GFRA4-202ENST00000319242 UBR3Q6ZT12 1888 aa35.54■■■■□ 3.28
GFRA4-202ENST00000319242 RC3H1Q5TC82 1133 aaKnown RBP35.53■■■■□ 3.28
GFRA4-202ENST00000319242 CNTNAP4Q9C0A0 1308 aa35.52■■■■□ 3.28
GFRA4-202ENST00000319242 POLD1P28340 1107 aa35.51■■■■□ 3.28
GFRA4-202ENST00000319242 ARXQ96QS3 562 aa35.51■■■■□ 3.28
GFRA4-202ENST00000319242 HTATSF1O43719 755 aaKnown RBP35.5■■■■□ 3.27
GFRA4-202ENST00000319242 MCM10Q7L590 875 aa35.49■■■■□ 3.27
GFRA4-202ENST00000319242 RTCBQ9Y3I0 505 aaKnown RBP35.49■■■■□ 3.27
GFRA4-202ENST00000319242 COL5A3P25940 1745 aaPredicted RBP35.49■■■■□ 3.27
GFRA4-202ENST00000319242 YY1P25490 414 aa35.48■■■■□ 3.27
GFRA4-202ENST00000319242 TTC5Q8N0Z6 440 aa35.48■■■■□ 3.27
GFRA4-202ENST00000319242 KCPQ6ZWJ8 1503 aa35.47■■■■□ 3.27
GFRA4-202ENST00000319242 DCTN1Q14203 1278 aa35.47■■■■□ 3.27
GFRA4-202ENST00000319242 MSL1Q68DK7 614 aa35.47■■■■□ 3.27
GFRA4-202ENST00000319242 DNAJC10Q8IXB1 793 aa35.47■■■■□ 3.27
GFRA4-202ENST00000319242 COL24A1Q17RW2 1714 aa35.46■■■■□ 3.27
GFRA4-202ENST00000319242 RPS6KA4O75676 772 aa35.46■■■■□ 3.27
GFRA4-202ENST00000319242 CRKLP46109 303 aaKnown RBP35.46■■■■□ 3.27
GFRA4-202ENST00000319242 MAPK8IP3Q9UPT6 1336 aa35.46■■■■□ 3.27
GFRA4-202ENST00000319242 TJP1Q07157 1748 aa35.46■■■■□ 3.27
GFRA4-202ENST00000319242 NFE2L2Q16236 605 aa35.45■■■■□ 3.27
GFRA4-202ENST00000319242 TRAPPC3LQ5T215 181 aa35.45■■■■□ 3.27
GFRA4-202ENST00000319242 ZNF790Q6PG37 636 aa35.45■■■■□ 3.27
GFRA4-202ENST00000319242 SIPA1L3O60292 1781 aaPredicted RBP35.45■■■■□ 3.27
GFRA4-202ENST00000319242 VSIG10Q8N0Z9 540 aa35.44■■■■□ 3.26
GFRA4-202ENST00000319242 FHDC1Q9C0D6 1143 aaPredicted RBP35.44■■■■□ 3.26
GFRA4-202ENST00000319242 CICQ96RK0 1608 aaPredicted RBP35.43■■■■□ 3.26
GFRA4-202ENST00000319242 BTBD11A6QL63 1104 aa35.43■■■■□ 3.26
GFRA4-202ENST00000319242 MYH14Q7Z406 1995 aaKnown RBP35.43■■■■□ 3.26
GFRA4-202ENST00000319242 ADRA2BP18089 450 aa35.41■■■■□ 3.26
GFRA4-202ENST00000319242 WDR43Q15061 677 aaKnown RBP eCLIP35.41■■■■□ 3.26
GFRA4-202ENST00000319242 ZNF496Q96IT1 587 aaPredicted RBP35.41■■■■□ 3.26
GFRA4-202ENST00000319242 INTS5Q6P9B9 1019 aaKnown RBP35.4■■■■□ 3.26
GFRA4-202ENST00000319242 ARHGEF1Q92888 912 aaKnown RBP35.4■■■■□ 3.26
GFRA4-202ENST00000319242 SYT17Q9BSW7 474 aa35.4■■■■□ 3.26
GFRA4-202ENST00000319242 UBR2Q8IWV8 1755 aa35.4■■■■□ 3.26
GFRA4-202ENST00000319242 CYP19A1P11511 503 aaPredicted RBP35.39■■■■□ 3.26
GFRA4-202ENST00000319242 KCNQ3O43525 872 aa35.38■■■■□ 3.25
GFRA4-202ENST00000319242 CCDC87Q9NVE4 849 aa35.38■■■■□ 3.25
GFRA4-202ENST00000319242 HEG1Q9ULI3 1381 aa35.37■■■■□ 3.25
GFRA4-202ENST00000319242 DLG5Q8TDM6 1919 aa35.36■■■■□ 3.25
GFRA4-202ENST00000319242 FMNL2Q96PY5 1086 aa35.36■■■■□ 3.25
GFRA4-202ENST00000319242 ADAMTS8Q9UP79 889 aa35.35■■■■□ 3.25
GFRA4-202ENST00000319242 RFC4P35249 363 aa35.34■■■■□ 3.25
GFRA4-202ENST00000319242 TAF7Q15545 349 aaPredicted RBP35.34■■■■□ 3.25
GFRA4-202ENST00000319242 CCDC146Q8IYE0 955 aa35.34■■■■□ 3.25
GFRA4-202ENST00000319242 KLHL34Q8N239 644 aa35.33■■■■□ 3.25
GFRA4-202ENST00000319242 TEX13AQ9BXU3 409 aaPredicted RBP35.32■■■■□ 3.24
GFRA4-202ENST00000319242 STARD3NLO95772 234 aa35.31■■■■□ 3.24
GFRA4-202ENST00000319242 TMPOP42166 694 aaKnown RBP35.31■■■■□ 3.24
GFRA4-202ENST00000319242 RIPK4P57078 832 aa35.31■■■■□ 3.24
GFRA4-202ENST00000319242 RUNDC1Q96C34 613 aa35.3■■■■□ 3.24
GFRA4-202ENST00000319242 THUMPD2Q9BTF0 503 aaKnown RBP35.3■■■■□ 3.24
GFRA4-202ENST00000319242 ZBTB1Q9Y2K1 713 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms