RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 BARGINQ6ZT62 677 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 SLIT3O75094 1523 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
CAPN3-201ENST00000318023 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
CAPN3-201ENST00000318023 BECN1Q14457 450 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
CAPN3-201ENST00000318023 ANTXR1Q9H6X2 564 aa11.79□□□□□ -0.52
CAPN3-201ENST00000318023 TRAK2O60296 914 aa11.78□□□□□ -0.52
CAPN3-201ENST00000318023 MCM4P33991 863 aa11.78□□□□□ -0.52
CAPN3-201ENST00000318023 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
CAPN3-201ENST00000318023 MYOM1P52179 1685 aa11.77□□□□□ -0.52
CAPN3-201ENST00000318023 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
CAPN3-201ENST00000318023 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-201ENST00000318023 BAG6P46379 1132 aa11.77□□□□□ -0.53
CAPN3-201ENST00000318023 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
CAPN3-201ENST00000318023 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-201ENST00000318023 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPN3-201ENST00000318023 MARF1Q9Y4F3 1742 aaKnown RBP11.75□□□□□ -0.53
CAPN3-201ENST00000318023 CDK12Q9NYV4 1490 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-201ENST00000318023 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
CAPN3-201ENST00000318023 R3HDM1Q15032 1099 aaKnown RBP11.75□□□□□ -0.53
CAPN3-201ENST00000318023 INSRP06213 1382 aa11.75□□□□□ -0.53
CAPN3-201ENST00000318023 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
CAPN3-201ENST00000318023 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
CAPN3-201ENST00000318023 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
CAPN3-201ENST00000318023 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
CAPN3-201ENST00000318023 MEGF6O75095 1541 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 CYP27B1O15528 508 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 NEUROD2Q15784 382 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-201ENST00000318023 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 OFD1O75665 1012 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 DMTNQ08495 405 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 UQCRHLA0A096LP55 91 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 UQCRHP07919 91 aa11.73□□□□□ -0.53
CAPN3-201ENST00000318023 BLMP54132 1417 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-201ENST00000318023 LTN1O94822 1766 aa11.72□□□□□ -0.53
CAPN3-201ENST00000318023 IPO4Q8TEX9 1081 aaKnown RBP11.72□□□□□ -0.53
CAPN3-201ENST00000318023 TBC1D2Q9BYX2 928 aa11.72□□□□□ -0.53
CAPN3-201ENST00000318023 IL13P35225 146 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-201ENST00000318023 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 BRWD3Q6RI45 1802 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 NRAPQ86VF7 1730 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-201ENST00000318023 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-201ENST00000318023 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 CFAP53Q96M91 514 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-201ENST00000318023 TMEM51Q9NW97 253 aa11.71□□□□□ -0.53
CAPN3-201ENST00000318023 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.54
CAPN3-201ENST00000318023 ZNF830Q96NB3 372 aaPredicted RBP11.71□□□□□ -0.54
CAPN3-201ENST00000318023 MSNP26038 577 aaKnown RBP11.7□□□□□ -0.54
CAPN3-201ENST00000318023 NWD2Q9ULI1 1742 aa11.7□□□□□ -0.54
CAPN3-201ENST00000318023 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
CAPN3-201ENST00000318023 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
CAPN3-201ENST00000318023 OVOS2A0A0G2JMS6 1433 aa11.7□□□□□ -0.54
CAPN3-201ENST00000318023 SPG7Q9UQ90 795 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
CAPN3-201ENST00000318023 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 DCTN1Q14203 1278 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 C1orf141Q5JVX7 400 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 COL18A1P39060 1754 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 ZBTB22O15209 634 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 PHACTR3Q96KR7 559 aa11.69□□□□□ -0.54
CAPN3-201ENST00000318023 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
CAPN3-201ENST00000318023 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
CAPN3-201ENST00000318023 NSD2O96028 1365 aa11.68□□□□□ -0.54
CAPN3-201ENST00000318023 UTP14CQ5TAP6 766 aaKnown RBP11.68□□□□□ -0.54
CAPN3-201ENST00000318023 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
CAPN3-201ENST00000318023 LGR6Q9HBX8 967 aa11.68□□□□□ -0.54
CAPN3-201ENST00000318023 MAP2P11137 1827 aaKnown RBP11.68□□□□□ -0.54
CAPN3-201ENST00000318023 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
CAPN3-201ENST00000318023 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
CAPN3-201ENST00000318023 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
CAPN3-201ENST00000318023 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
CAPN3-201ENST00000318023 PLEKHO1Q53GL0 409 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-201ENST00000318023 PROM2Q8N271 834 aa11.67□□□□□ -0.54
CAPN3-201ENST00000318023 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
CAPN3-201ENST00000318023 KIF20BQ96Q89 1820 aa11.67□□□□□ -0.54
CAPN3-201ENST00000318023 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
CAPN3-201ENST00000318023 PCDH11XQ9BZA7 1347 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 PCDH11YQ9BZA8 1340 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 IFNL2Q8IZJ0 200 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 IGSF1Q8N6C5 1336 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 PHF14O94880 888 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 PHKG2P15735 406 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
CAPN3-201ENST00000318023 PIGBQ92521 554 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 CAMKK2Q96RR4 588 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 TMOD3Q9NYL9 352 aa11.66□□□□□ -0.54
CAPN3-201ENST00000318023 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms