RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 CEMIPQ8WUJ3 1361 aa18.28■□□□□ 0.52
MSRA-201ENST00000317173 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
MSRA-201ENST00000317173 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
MSRA-201ENST00000317173 DCTN1Q14203 1278 aa18.27■□□□□ 0.51
MSRA-201ENST00000317173 MCM10Q7L590 875 aa18.27■□□□□ 0.51
MSRA-201ENST00000317173 IFNL2Q8IZJ0 200 aa18.27■□□□□ 0.51
MSRA-201ENST00000317173 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.51
MSRA-201ENST00000317173 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.51
MSRA-201ENST00000317173 BABAM1Q9NWV8 329 aa18.27■□□□□ 0.51
MSRA-201ENST00000317173 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
MSRA-201ENST00000317173 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
MSRA-201ENST00000317173 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
MSRA-201ENST00000317173 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
MSRA-201ENST00000317173 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
MSRA-201ENST00000317173 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
MSRA-201ENST00000317173 PTF1AQ7RTS3 328 aa18.25■□□□□ 0.51
MSRA-201ENST00000317173 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
MSRA-201ENST00000317173 PHKG2P15735 406 aa18.24■□□□□ 0.51
MSRA-201ENST00000317173 IL17REQ8NFR9 667 aa18.24■□□□□ 0.51
MSRA-201ENST00000317173 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
MSRA-201ENST00000317173 CHL1O00533 1208 aa18.23■□□□□ 0.51
MSRA-201ENST00000317173 KCNQ2O43526 872 aa18.23■□□□□ 0.51
MSRA-201ENST00000317173 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
MSRA-201ENST00000317173 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
MSRA-201ENST00000317173 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
MSRA-201ENST00000317173 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
MSRA-201ENST00000317173 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
MSRA-201ENST00000317173 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
MSRA-201ENST00000317173 MRC1P22897 1456 aa18.21■□□□□ 0.51
MSRA-201ENST00000317173 CYP27B1O15528 508 aa18.21■□□□□ 0.51
MSRA-201ENST00000317173 R3HDM1Q15032 1099 aaKnown RBP18.21■□□□□ 0.51
MSRA-201ENST00000317173 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
MSRA-201ENST00000317173 MBIPQ9NS73 344 aa18.21■□□□□ 0.51
MSRA-201ENST00000317173 TEFQ10587 303 aa18.2■□□□□ 0.5
MSRA-201ENST00000317173 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
MSRA-201ENST00000317173 TAF7Q15545 349 aaPredicted RBP18.2■□□□□ 0.5
MSRA-201ENST00000317173 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
MSRA-201ENST00000317173 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
MSRA-201ENST00000317173 RNF123Q5XPI4 1314 aa18.2■□□□□ 0.5
MSRA-201ENST00000317173 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
MSRA-201ENST00000317173 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
MSRA-201ENST00000317173 BTAF1O14981 1849 aa18.19■□□□□ 0.5
MSRA-201ENST00000317173 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
MSRA-201ENST00000317173 TXNRD1Q16881 649 aa18.18■□□□□ 0.5
MSRA-201ENST00000317173 LGR6Q9HBX8 967 aa18.18■□□□□ 0.5
MSRA-201ENST00000317173 TSPYL4Q9UJ04 414 aa18.18■□□□□ 0.5
MSRA-201ENST00000317173 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
MSRA-201ENST00000317173 KAT6BQ8WYB5 2073 aa18.17■□□□□ 0.5
MSRA-201ENST00000317173 PROM2Q8N271 834 aa18.17■□□□□ 0.5
MSRA-201ENST00000317173 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
MSRA-201ENST00000317173 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
MSRA-201ENST00000317173 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
MSRA-201ENST00000317173 LRP5O75197 1615 aa18.16■□□□□ 0.5
MSRA-201ENST00000317173 SLC52A2Q9HAB3 445 aa18.15■□□□□ 0.5
MSRA-201ENST00000317173 NEFLP07196 543 aa18.14■□□□□ 0.49
MSRA-201ENST00000317173 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.49
MSRA-201ENST00000317173 ERVV-2B6SEH9 535 aa18.13■□□□□ 0.49
MSRA-201ENST00000317173 TOGARAM1Q9Y4F4 1720 aa18.13■□□□□ 0.49
MSRA-201ENST00000317173 BTBD11A6QL63 1104 aa18.13■□□□□ 0.49
MSRA-201ENST00000317173 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
MSRA-201ENST00000317173 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
MSRA-201ENST00000317173 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.13■□□□□ 0.49
MSRA-201ENST00000317173 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
MSRA-201ENST00000317173 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
MSRA-201ENST00000317173 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
MSRA-201ENST00000317173 SLC27A3Q5K4L6 730 aa18.12■□□□□ 0.49
MSRA-201ENST00000317173 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
MSRA-201ENST00000317173 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
MSRA-201ENST00000317173 ITGB4P16144 1822 aa18.11■□□□□ 0.49
MSRA-201ENST00000317173 VAMP4O75379 141 aa18.11■□□□□ 0.49
MSRA-201ENST00000317173 CABP4P57796 275 aa18.1■□□□□ 0.49
MSRA-201ENST00000317173 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
MSRA-201ENST00000317173 CHMP4AQ9BY43 222 aa18.1■□□□□ 0.49
MSRA-201ENST00000317173 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
MSRA-201ENST00000317173 PAPPAQ13219 1627 aa18.1■□□□□ 0.49
MSRA-201ENST00000317173 HOXB7P09629 217 aa18.09■□□□□ 0.49
MSRA-201ENST00000317173 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.49
MSRA-201ENST00000317173 SLC15A2Q16348 729 aa18.08■□□□□ 0.49
MSRA-201ENST00000317173 TSPYL6Q8N831 410 aa18.08■□□□□ 0.49
MSRA-201ENST00000317173 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.49
MSRA-201ENST00000317173 UBR2Q8IWV8 1755 aa18.08■□□□□ 0.49
MSRA-201ENST00000317173 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
MSRA-201ENST00000317173 LY75O60449 1722 aa18.07■□□□□ 0.48
MSRA-201ENST00000317173 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
MSRA-201ENST00000317173 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
MSRA-201ENST00000317173 BCAR3O75815 825 aa18.06■□□□□ 0.48
MSRA-201ENST00000317173 ZNF790Q6PG37 636 aa18.06■□□□□ 0.48
MSRA-201ENST00000317173 SMARCC1Q92922 1105 aaPredicted RBP18.06■□□□□ 0.48
MSRA-201ENST00000317173 LRRC4BQ9NT99 713 aa18.06■□□□□ 0.48
MSRA-201ENST00000317173 SMC4Q9NTJ3 1288 aa18.06■□□□□ 0.48
MSRA-201ENST00000317173 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
MSRA-201ENST00000317173 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
MSRA-201ENST00000317173 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
MSRA-201ENST00000317173 CCNL1Q9UK58 526 aaPredicted RBP18.05■□□□□ 0.48
MSRA-201ENST00000317173 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
MSRA-201ENST00000317173 CASZ1Q86V15 1759 aa18.05■□□□□ 0.48
MSRA-201ENST00000317173 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
MSRA-201ENST00000317173 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
MSRA-201ENST00000317173 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
MSRA-201ENST00000317173 TMOD3Q9NYL9 352 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms