RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 ANKRD24Q8TF21 1146 aa18.4■□□□□ 0.54
RPUSD2-201ENST00000315616 TBC1D2Q9BYX2 928 aa18.4■□□□□ 0.54
RPUSD2-201ENST00000315616 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
RPUSD2-201ENST00000315616 FKBP5Q13451 457 aaPredicted RBP18.4■□□□□ 0.54
RPUSD2-201ENST00000315616 MED1Q15648 1581 aaPredicted RBP18.4■□□□□ 0.54
RPUSD2-201ENST00000315616 KIF1AQ12756 1690 aa18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 TMEM94Q12767 1356 aa18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 ZNF530Q6P9A1 599 aaPredicted RBP18.39■□□□□ 0.53
RPUSD2-201ENST00000315616 RGPD5Q99666 1765 aa18.38■□□□□ 0.53
RPUSD2-201ENST00000315616 KCNQ3O43525 872 aa18.38■□□□□ 0.53
RPUSD2-201ENST00000315616 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
RPUSD2-201ENST00000315616 PLEKHO1Q53GL0 409 aaPredicted RBP18.38■□□□□ 0.53
RPUSD2-201ENST00000315616 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
RPUSD2-201ENST00000315616 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
RPUSD2-201ENST00000315616 MST1RQ04912 1400 aa18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 HDGFL1Q5TGJ6 251 aa18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 ATF3P18847 181 aa18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
RPUSD2-201ENST00000315616 ALS2Q96Q42 1657 aa18.36■□□□□ 0.53
RPUSD2-201ENST00000315616 PXDNQ92626 1479 aa18.36■□□□□ 0.53
RPUSD2-201ENST00000315616 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
RPUSD2-201ENST00000315616 TBC1D9Q6ZT07 1266 aa18.36■□□□□ 0.53
RPUSD2-201ENST00000315616 KDM3BQ7LBC6 1761 aa18.36■□□□□ 0.53
RPUSD2-201ENST00000315616 APBB1O00213 710 aa18.35■□□□□ 0.53
RPUSD2-201ENST00000315616 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
RPUSD2-201ENST00000315616 EIF5BO60841 1220 aaKnown RBP18.35■□□□□ 0.53
RPUSD2-201ENST00000315616 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
RPUSD2-201ENST00000315616 GNAI2P04899 355 aa18.34■□□□□ 0.53
RPUSD2-201ENST00000315616 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
RPUSD2-201ENST00000315616 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
RPUSD2-201ENST00000315616 TEFQ10587 303 aa18.34■□□□□ 0.53
RPUSD2-201ENST00000315616 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
RPUSD2-201ENST00000315616 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
RPUSD2-201ENST00000315616 BTBD11A6QL63 1104 aa18.33■□□□□ 0.53
RPUSD2-201ENST00000315616 SLKQ9H2G2 1235 aaPredicted RBP18.33■□□□□ 0.53
RPUSD2-201ENST00000315616 TTC22Q5TAA0 569 aa18.33■□□□□ 0.52
RPUSD2-201ENST00000315616 ERBB3P21860 1342 aa18.32■□□□□ 0.52
RPUSD2-201ENST00000315616 HMMRO75330 724 aa18.32■□□□□ 0.52
RPUSD2-201ENST00000315616 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
RPUSD2-201ENST00000315616 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
RPUSD2-201ENST00000315616 GNAI3P08754 354 aa18.31■□□□□ 0.52
RPUSD2-201ENST00000315616 N4BP2Q86UW6 1770 aaPredicted RBP18.31■□□□□ 0.52
RPUSD2-201ENST00000315616 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
RPUSD2-201ENST00000315616 CHPF2Q9P2E5 772 aa18.31■□□□□ 0.52
RPUSD2-201ENST00000315616 ZNF335Q9H4Z2 1342 aaPredicted RBP18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 PNMA6EA0A0J9YXQ4 647 aa18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 CDC45O75419 566 aa18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 HOXB7P09629 217 aa18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 DCCP43146 1447 aa18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 XIRP1Q702N8 1843 aaKnown RBP18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 KIF2CQ99661 725 aa18.3■□□□□ 0.52
RPUSD2-201ENST00000315616 ATP8B2P98198 1209 aa18.29■□□□□ 0.52
RPUSD2-201ENST00000315616 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
RPUSD2-201ENST00000315616 ANXA1P04083 346 aa18.28■□□□□ 0.52
RPUSD2-201ENST00000315616 EXOC6BQ9Y2D4 811 aa18.28■□□□□ 0.52
RPUSD2-201ENST00000315616 LRRFIP2Q9Y608 721 aaKnown RBP18.28■□□□□ 0.52
RPUSD2-201ENST00000315616 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
RPUSD2-201ENST00000315616 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
RPUSD2-201ENST00000315616 SDSP20132 328 aa18.27■□□□□ 0.52
RPUSD2-201ENST00000315616 OVOS2A0A0G2JMS6 1433 aa18.27■□□□□ 0.51
RPUSD2-201ENST00000315616 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 COL18A1P39060 1754 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 NLRP2Q9NX02 1062 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 LTBP4Q8N2S1 1624 aa18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 SIPA1L3O60292 1781 aaPredicted RBP18.26■□□□□ 0.51
RPUSD2-201ENST00000315616 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
RPUSD2-201ENST00000315616 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
RPUSD2-201ENST00000315616 CRYBG1Q9Y4K1 1723 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 BEND3Q5T5X7 828 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 ADAMTS7Q9UKP4 1686 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 PDE1AP54750 535 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 CHRNA2Q15822 529 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 DNAAF4Q8WXU2 420 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 OSBPL3Q9H4L5 887 aa18.24■□□□□ 0.51
RPUSD2-201ENST00000315616 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 SNX21Q969T3 373 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 ADCY9O60503 1353 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
RPUSD2-201ENST00000315616 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms