RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 SLC4A10Q6U841 1118 aa23.82■■□□□ 1.4
CD55-201ENST00000314754 HSPA2P54652 639 aa23.81■■□□□ 1.4
CD55-201ENST00000314754 ZNF530Q6P9A1 599 aaPredicted RBP23.81■■□□□ 1.4
CD55-201ENST00000314754 MFAP1P55081 439 aaKnown RBP23.79■■□□□ 1.4
CD55-201ENST00000314754 FKBP5Q13451 457 aaPredicted RBP23.79■■□□□ 1.4
CD55-201ENST00000314754 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
CD55-201ENST00000314754 C22orf23Q9BZE7 217 aa23.79■■□□□ 1.4
CD55-201ENST00000314754 OVOS2A0A0G2JMS6 1433 aa23.78■■□□□ 1.4
CD55-201ENST00000314754 N4BP2Q86UW6 1770 aaPredicted RBP23.78■■□□□ 1.4
CD55-201ENST00000314754 HOXB7P09629 217 aa23.78■■□□□ 1.4
CD55-201ENST00000314754 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
CD55-201ENST00000314754 HDGFL1Q5TGJ6 251 aa23.77■■□□□ 1.4
CD55-201ENST00000314754 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
CD55-201ENST00000314754 PXDNLA1KZ92 1463 aa23.77■■□□□ 1.4
CD55-201ENST00000314754 HMMRO75330 724 aa23.76■■□□□ 1.39
CD55-201ENST00000314754 ZC3H6P61129 1189 aaKnown RBP23.76■■□□□ 1.39
CD55-201ENST00000314754 TEFQ10587 303 aa23.76■■□□□ 1.39
CD55-201ENST00000314754 ERBB3P21860 1342 aa23.76■■□□□ 1.39
CD55-201ENST00000314754 EIF4A1P60842 406 aaKnown RBP23.76■■□□□ 1.39
CD55-201ENST00000314754 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
CD55-201ENST00000314754 CHMP4AQ9BY43 222 aa23.76■■□□□ 1.39
CD55-201ENST00000314754 MPRIPQ6WCQ1 1025 aa23.75■■□□□ 1.39
CD55-201ENST00000314754 KCNQ3O43525 872 aa23.74■■□□□ 1.39
CD55-201ENST00000314754 NPHP3Q7Z494 1330 aa23.74■■□□□ 1.39
CD55-201ENST00000314754 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
CD55-201ENST00000314754 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
CD55-201ENST00000314754 PLEKHM2Q8IWE5 1019 aa23.74■■□□□ 1.39
CD55-201ENST00000314754 GNAI2P04899 355 aa23.73■■□□□ 1.39
CD55-201ENST00000314754 GNAI3P08754 354 aa23.73■■□□□ 1.39
CD55-201ENST00000314754 RNMTO43148 476 aaKnown RBP23.72■■□□□ 1.39
CD55-201ENST00000314754 BTBD11A6QL63 1104 aa23.72■■□□□ 1.39
CD55-201ENST00000314754 SIPA1L3O60292 1781 aaPredicted RBP23.71■■□□□ 1.39
CD55-201ENST00000314754 COL18A1P39060 1754 aa23.71■■□□□ 1.39
CD55-201ENST00000314754 C16orf71Q8IYS4 520 aaPredicted RBP23.7■■□□□ 1.38
CD55-201ENST00000314754 PHAXQ9H814 394 aaKnown RBP23.7■■□□□ 1.38
CD55-201ENST00000314754 TNS3Q68CZ2 1445 aa23.7■■□□□ 1.38
CD55-201ENST00000314754 RBM25P49756 843 aaKnown RBP23.69■■□□□ 1.38
CD55-201ENST00000314754 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
CD55-201ENST00000314754 TBC1D2Q9BYX2 928 aa23.69■■□□□ 1.38
CD55-201ENST00000314754 APBB1O00213 710 aa23.68■■□□□ 1.38
CD55-201ENST00000314754 SMARCA5O60264 1052 aaPredicted RBP23.68■■□□□ 1.38
CD55-201ENST00000314754 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
CD55-201ENST00000314754 TBC1D9Q6ZT07 1266 aa23.68■■□□□ 1.38
CD55-201ENST00000314754 ADAMTS7Q9UKP4 1686 aa23.68■■□□□ 1.38
CD55-201ENST00000314754 GSPT1P15170 499 aaKnown RBP23.68■■□□□ 1.38
CD55-201ENST00000314754 OTUD7AQ8TE49 926 aaPredicted RBP23.68■■□□□ 1.38
CD55-201ENST00000314754 STRCQ7RTU9 1775 aa23.67■■□□□ 1.38
CD55-201ENST00000314754 ABCC6O95255 1503 aa23.67■■□□□ 1.38
CD55-201ENST00000314754 CDC45O75419 566 aa23.67■■□□□ 1.38
CD55-201ENST00000314754 TTC22Q5TAA0 569 aa23.67■■□□□ 1.38
CD55-201ENST00000314754 NFKBIBQ15653 356 aa23.66■■□□□ 1.38
CD55-201ENST00000314754 CHPF2Q9P2E5 772 aa23.65■■□□□ 1.38
CD55-201ENST00000314754 RAPGEF4Q8WZA2 1011 aa23.65■■□□□ 1.38
CD55-201ENST00000314754 EIF5BO60841 1220 aaKnown RBP23.64■■□□□ 1.37
CD55-201ENST00000314754 USP44Q9H0E7 712 aa23.64■■□□□ 1.37
CD55-201ENST00000314754 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.37
CD55-201ENST00000314754 HEG1Q9ULI3 1381 aa23.63■■□□□ 1.37
CD55-201ENST00000314754 SPATA31A3Q5VYP0 1347 aa23.63■■□□□ 1.37
CD55-201ENST00000314754 PLEKHG2Q9H7P9 1386 aa23.63■■□□□ 1.37
CD55-201ENST00000314754 ANXA1P04083 346 aa23.63■■□□□ 1.37
CD55-201ENST00000314754 ATP8B2P98198 1209 aa23.63■■□□□ 1.37
CD55-201ENST00000314754 SCN11AQ9UI33 1791 aa23.62■■□□□ 1.37
CD55-201ENST00000314754 UBTFL1P0CB47 393 aaPredicted RBP23.61■■□□□ 1.37
CD55-201ENST00000314754 CHRNA2Q15822 529 aa23.61■■□□□ 1.37
CD55-201ENST00000314754 SRCIN1Q9C0H9 1055 aa23.61■■□□□ 1.37
CD55-201ENST00000314754 GIGYF1O75420 1035 aaPredicted RBP23.61■■□□□ 1.37
CD55-201ENST00000314754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.61■■□□□ 1.371e-7■■■□□ 16.2
CD55-201ENST00000314754 DBF4Q9UBU7 674 aaPredicted RBP23.61■■□□□ 1.37
CD55-201ENST00000314754 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
CD55-201ENST00000314754 MEGF6O75095 1541 aa23.6■■□□□ 1.37
CD55-201ENST00000314754 CPDO75976 1380 aa23.6■■□□□ 1.37
CD55-201ENST00000314754 PNMA6EA0A0J9YXQ4 647 aa23.6■■□□□ 1.37
CD55-201ENST00000314754 TATP17735 454 aaPredicted RBP23.6■■□□□ 1.37
CD55-201ENST00000314754 DEKP35659 375 aaKnown RBP23.6■■□□□ 1.37
CD55-201ENST00000314754 ANTXR1Q9H6X2 564 aa23.6■■□□□ 1.37
CD55-201ENST00000314754 PRAMEF22A3QJZ6 481 aa23.59■■□□□ 1.37
CD55-201ENST00000314754 DNAAF4Q8WXU2 420 aa23.59■■□□□ 1.37
CD55-201ENST00000314754 SLKQ9H2G2 1235 aaPredicted RBP23.59■■□□□ 1.37
CD55-201ENST00000314754 OSBPL3Q9H4L5 887 aa23.59■■□□□ 1.37
CD55-201ENST00000314754 SPG7Q9UQ90 795 aa23.59■■□□□ 1.37
CD55-201ENST00000314754 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
CD55-201ENST00000314754 PI4KAP2A4QPH2 592 aa23.58■■□□□ 1.37
CD55-201ENST00000314754 PI4KAP1Q8N8J0 262 aa23.58■■□□□ 1.37
CD55-201ENST00000314754 IBTKQ9P2D0 1353 aaPredicted RBP23.57■■□□□ 1.36
CD55-201ENST00000314754 KDM6AO15550 1401 aaPredicted RBP23.57■■□□□ 1.36
CD55-201ENST00000314754 CSB-PGBD3P0DP91 1061 aa23.57■■□□□ 1.36
CD55-201ENST00000314754 BEND3Q5T5X7 828 aa23.57■■□□□ 1.36
CD55-201ENST00000314754 BRINP3Q76B58 766 aa23.57■■□□□ 1.36
CD55-201ENST00000314754 LRRCC1Q9C099 1032 aa23.57■■□□□ 1.36
CD55-201ENST00000314754 ADCY9O60503 1353 aa23.56■■□□□ 1.36
CD55-201ENST00000314754 C5P01031 1676 aa23.56■■□□□ 1.36
CD55-201ENST00000314754 SDSP20132 328 aa23.56■■□□□ 1.36
CD55-201ENST00000314754 HSCBQ8IWL3 235 aa23.56■■□□□ 1.36
CD55-201ENST00000314754 TUBGCP6Q96RT7 1819 aa23.56■■□□□ 1.36
CD55-201ENST00000314754 PHKG2P15735 406 aa23.55■■□□□ 1.36
CD55-201ENST00000314754 PROSER3Q2NL68 480 aa23.55■■□□□ 1.36
CD55-201ENST00000314754 SNX21Q969T3 373 aa23.55■■□□□ 1.36
CD55-201ENST00000314754 KDM4FA0A1W2PPD8 638 aa23.55■■□□□ 1.36
CD55-201ENST00000314754 PDE1AP54750 535 aa23.55■■□□□ 1.36
CD55-201ENST00000314754 SSH3Q8TE77 659 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms