RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 C1orf115Q9H7X2 142 aa23.2■■□□□ 1.3
HCLS1-201ENST00000314583 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
HCLS1-201ENST00000314583 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
HCLS1-201ENST00000314583 CCT4P50991 539 aaKnown RBP23.18■■□□□ 1.3
HCLS1-201ENST00000314583 UPF2Q9HAU5 1272 aaKnown RBP23.18■■□□□ 1.3
HCLS1-201ENST00000314583 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
HCLS1-201ENST00000314583 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
HCLS1-201ENST00000314583 CHRNA2Q15822 529 aa23.17■■□□□ 1.3
HCLS1-201ENST00000314583 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
HCLS1-201ENST00000314583 RPAP2Q8IXW5 612 aaPredicted RBP23.17■■□□□ 1.3
HCLS1-201ENST00000314583 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
HCLS1-201ENST00000314583 PXDNLA1KZ92 1463 aa23.16■■□□□ 1.3
HCLS1-201ENST00000314583 HOXB7P09629 217 aa23.16■■□□□ 1.3
HCLS1-201ENST00000314583 MEGF6O75095 1541 aa23.15■■□□□ 1.3
HCLS1-201ENST00000314583 C1orf141Q5JVX7 400 aa23.15■■□□□ 1.3
HCLS1-201ENST00000314583 ANKRD44Q8N8A2 993 aa23.15■■□□□ 1.3
HCLS1-201ENST00000314583 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
HCLS1-201ENST00000314583 RNMTO43148 476 aaKnown RBP23.15■■□□□ 1.3
HCLS1-201ENST00000314583 LNPKQ9C0E8 428 aa23.15■■□□□ 1.3
HCLS1-201ENST00000314583 NLRP2Q9NX02 1062 aa23.15■■□□□ 1.3
HCLS1-201ENST00000314583 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.3
HCLS1-201ENST00000314583 G2E3Q7L622 706 aa23.14■■□□□ 1.29
HCLS1-201ENST00000314583 ANKRD45Q5TZF3 282 aa23.13■■□□□ 1.29
HCLS1-201ENST00000314583 TEFQ10587 303 aa23.13■■□□□ 1.29
HCLS1-201ENST00000314583 FLIIQ13045 1269 aa23.13■■□□□ 1.29
HCLS1-201ENST00000314583 DAXXQ9UER7 740 aaPredicted RBP23.12■■□□□ 1.29
HCLS1-201ENST00000314583 SEC24BO95487 1268 aa23.11■■□□□ 1.29
HCLS1-201ENST00000314583 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
HCLS1-201ENST00000314583 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
HCLS1-201ENST00000314583 DCTPP1Q9H773 170 aa23.11■■□□□ 1.29
HCLS1-201ENST00000314583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
HCLS1-201ENST00000314583 SCN11AQ9UI33 1791 aa23.11■■□□□ 1.29
HCLS1-201ENST00000314583 CSB-PGBD3P0DP91 1061 aa23.1■■□□□ 1.29
HCLS1-201ENST00000314583 TATP17735 454 aaPredicted RBP23.1■■□□□ 1.29
HCLS1-201ENST00000314583 EIF4A1P60842 406 aaKnown RBP23.1■■□□□ 1.29
HCLS1-201ENST00000314583 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
HCLS1-201ENST00000314583 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
HCLS1-201ENST00000314583 MEIS3Q99687 375 aa23.09■■□□□ 1.29
HCLS1-201ENST00000314583 ROBO1Q9Y6N7 1651 aa23.09■■□□□ 1.29
HCLS1-201ENST00000314583 AHDC1Q5TGY3 1603 aaPredicted RBP23.09■■□□□ 1.29
HCLS1-201ENST00000314583 FKBP5Q13451 457 aaPredicted RBP23.09■■□□□ 1.29
HCLS1-201ENST00000314583 COL5A2P05997 1499 aaPredicted RBP23.09■■□□□ 1.29
HCLS1-201ENST00000314583 BMP2KLQ5H9B9 411 aa23.08■■□□□ 1.29
HCLS1-201ENST00000314583 SLC4A10Q6U841 1118 aa23.08■■□□□ 1.29
HCLS1-201ENST00000314583 PRDM11Q9NQV5 511 aa23.08■■□□□ 1.29
HCLS1-201ENST00000314583 BTBD11A6QL63 1104 aa23.08■■□□□ 1.28
HCLS1-201ENST00000314583 HMMRO75330 724 aa23.08■■□□□ 1.28
HCLS1-201ENST00000314583 F6X3S4 739 aa23.07■■□□□ 1.28
HCLS1-201ENST00000314583 TBC1D32Q96NH3 1257 aa23.07■■□□□ 1.28
HCLS1-201ENST00000314583 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
HCLS1-201ENST00000314583 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
HCLS1-201ENST00000314583 WDR17Q8IZU2 1322 aa23.07■■□□□ 1.28
HCLS1-201ENST00000314583 SPG7Q9UQ90 795 aa23.06■■□□□ 1.28
HCLS1-201ENST00000314583 GNAI3P08754 354 aa23.05■■□□□ 1.28
HCLS1-201ENST00000314583 KCNQ3O43525 872 aa23.04■■□□□ 1.28
HCLS1-201ENST00000314583 PHKG2P15735 406 aa23.04■■□□□ 1.28
HCLS1-201ENST00000314583 MRC1P22897 1456 aa23.04■■□□□ 1.28
HCLS1-201ENST00000314583 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
HCLS1-201ENST00000314583 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
HCLS1-201ENST00000314583 GNAI2P04899 355 aa23.04■■□□□ 1.28
HCLS1-201ENST00000314583 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
HCLS1-201ENST00000314583 BECN1Q14457 450 aa23.02■■□□□ 1.28
HCLS1-201ENST00000314583 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
HCLS1-201ENST00000314583 CYP27B1O15528 508 aa22.99■■□□□ 1.27
HCLS1-201ENST00000314583 EIF5BO60841 1220 aaKnown RBP22.99■■□□□ 1.27
HCLS1-201ENST00000314583 EIF2S2P20042 333 aaKnown RBP22.98■■□□□ 1.27
HCLS1-201ENST00000314583 CARD10Q9BWT7 1032 aa22.98■■□□□ 1.27
HCLS1-201ENST00000314583 SLC52A2Q9HAB3 445 aa22.98■■□□□ 1.27
HCLS1-201ENST00000314583 SHANK3Q9BYB0 1731 aa22.97■■□□□ 1.27
HCLS1-201ENST00000314583 MFAP1P55081 439 aaKnown RBP22.97■■□□□ 1.27
HCLS1-201ENST00000314583 C22orf23Q9BZE7 217 aa22.97■■□□□ 1.27
HCLS1-201ENST00000314583 CHPF2Q9P2E5 772 aa22.97■■□□□ 1.27
HCLS1-201ENST00000314583 COL14A1Q05707 1796 aaKnown RBP22.97■■□□□ 1.27
HCLS1-201ENST00000314583 TOM1L2Q6ZVM7 507 aa22.96■■□□□ 1.27
HCLS1-201ENST00000314583 PLEKHM2Q8IWE5 1019 aa22.96■■□□□ 1.27
HCLS1-201ENST00000314583 PHAXQ9H814 394 aaKnown RBP22.96■■□□□ 1.27
HCLS1-201ENST00000314583 DBF4Q9UBU7 674 aaPredicted RBP22.96■■□□□ 1.27
HCLS1-201ENST00000314583 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
HCLS1-201ENST00000314583 COL16A1Q07092 1604 aaPredicted RBP22.95■■□□□ 1.26
HCLS1-201ENST00000314583 GIGYF1O75420 1035 aaPredicted RBP22.95■■□□□ 1.26
HCLS1-201ENST00000314583 HSP90AB1P08238 724 aaKnown RBP22.94■■□□□ 1.26
HCLS1-201ENST00000314583 SRCIN1Q9C0H9 1055 aa22.94■■□□□ 1.26
HCLS1-201ENST00000314583 C5P01031 1676 aa22.93■■□□□ 1.26
HCLS1-201ENST00000314583 SLC4A3P48751 1232 aa22.93■■□□□ 1.26
HCLS1-201ENST00000314583 ATP8B2P98198 1209 aa22.93■■□□□ 1.26
HCLS1-201ENST00000314583 UBTFL1P0CB47 393 aaPredicted RBP22.92■■□□□ 1.26
HCLS1-201ENST00000314583 TTC22Q5TAA0 569 aa22.92■■□□□ 1.26
HCLS1-201ENST00000314583 DNAAF4Q8WXU2 420 aa22.92■■□□□ 1.26
HCLS1-201ENST00000314583 CDC45O75419 566 aa22.92■■□□□ 1.26
HCLS1-201ENST00000314583 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
HCLS1-201ENST00000314583 USP44Q9H0E7 712 aa22.92■■□□□ 1.26
HCLS1-201ENST00000314583 NBR1Q14596 966 aa22.91■■□□□ 1.26
HCLS1-201ENST00000314583 PCDH11XQ9BZA7 1347 aa22.91■■□□□ 1.26
HCLS1-201ENST00000314583 PCDH11YQ9BZA8 1340 aa22.91■■□□□ 1.26
HCLS1-201ENST00000314583 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
HCLS1-201ENST00000314583 PHLPP1O60346 1717 aa22.9■■□□□ 1.26
HCLS1-201ENST00000314583 RTL5Q5HYW3 569 aaPredicted RBP22.9■■□□□ 1.26
HCLS1-201ENST00000314583 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
HCLS1-201ENST00000314583 ZCRB1Q8TBF4 217 aaKnown RBP22.9■■□□□ 1.26
HCLS1-201ENST00000314583 GLI3P10071 1580 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms