RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 TSR2Q969E8 191 aaKnown RBP11.72□□□□□ -0.53
USP15-202ENST00000312635 A0A0G2JS52 829 aa11.71□□□□□ -0.53
USP15-202ENST00000312635 MYT1Q01538 1121 aa11.71□□□□□ -0.53
USP15-202ENST00000312635 MARCH10Q8NA82 808 aaPredicted RBP11.71□□□□□ -0.53
USP15-202ENST00000312635 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
USP15-202ENST00000312635 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.54
USP15-202ENST00000312635 SEPT12Q8IYM1 358 aa11.71□□□□□ -0.54
USP15-202ENST00000312635 RXRBP28702 533 aa11.7□□□□□ -0.54
USP15-202ENST00000312635 NFATC2IPQ8NCF5 419 aa11.7□□□□□ -0.54
USP15-202ENST00000312635 TMOD3Q9NYL9 352 aa11.7□□□□□ -0.54
USP15-202ENST00000312635 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
USP15-202ENST00000312635 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
USP15-202ENST00000312635 HOXB7P09629 217 aa11.69□□□□□ -0.54
USP15-202ENST00000312635 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
USP15-202ENST00000312635 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
USP15-202ENST00000312635 EIF4A1P60842 406 aaKnown RBP11.68□□□□□ -0.54
USP15-202ENST00000312635 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
USP15-202ENST00000312635 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
USP15-202ENST00000312635 ALDH1L2Q3SY69 923 aa11.68□□□□□ -0.54
USP15-202ENST00000312635 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
USP15-202ENST00000312635 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
USP15-202ENST00000312635 RGS17Q9UGC6 210 aaPredicted RBP11.68□□□□□ -0.54
USP15-202ENST00000312635 VAMP4O75379 141 aa11.67□□□□□ -0.54
USP15-202ENST00000312635 VIRMAQ69YN4 1812 aaKnown RBP11.67□□□□□ -0.54
USP15-202ENST00000312635 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
USP15-202ENST00000312635 C8orf58Q8NAV2 365 aa11.67□□□□□ -0.54
USP15-202ENST00000312635 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
USP15-202ENST00000312635 KRT27Q7Z3Y8 459 aa11.66□□□□□ -0.54
USP15-202ENST00000312635 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
USP15-202ENST00000312635 RARSP54136 660 aaKnown RBP11.66□□□□□ -0.54
USP15-202ENST00000312635 PIGBQ92521 554 aa11.66□□□□□ -0.54
USP15-202ENST00000312635 PAPPAQ13219 1627 aa11.65□□□□□ -0.54
USP15-202ENST00000312635 PRIM1P49642 420 aaKnown RBP11.65□□□□□ -0.54
USP15-202ENST00000312635 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
USP15-202ENST00000312635 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
USP15-202ENST00000312635 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.65□□□□□ -0.54
USP15-202ENST00000312635 RNF123Q5XPI4 1314 aa11.65□□□□□ -0.55
USP15-202ENST00000312635 KCNQ3O43525 872 aa11.64□□□□□ -0.55
USP15-202ENST00000312635 POTEAQ6S8J7 498 aa11.64□□□□□ -0.55
USP15-202ENST00000312635 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
USP15-202ENST00000312635 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
USP15-202ENST00000312635 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
USP15-202ENST00000312635 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
USP15-202ENST00000312635 SLC39A6Q13433 755 aa11.64□□□□□ -0.55
USP15-202ENST00000312635 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
USP15-202ENST00000312635 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
USP15-202ENST00000312635 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
USP15-202ENST00000312635 SYTL4Q96C24 671 aaPredicted RBP11.63□□□□□ -0.55
USP15-202ENST00000312635 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
USP15-202ENST00000312635 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
USP15-202ENST00000312635 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
USP15-202ENST00000312635 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
USP15-202ENST00000312635 RGS12O14924 1447 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
USP15-202ENST00000312635 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
USP15-202ENST00000312635 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 ITGB4P16144 1822 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 NHSQ6T4R5 1651 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 STK31Q9BXU1 1019 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 SMC4Q9NTJ3 1288 aa11.62□□□□□ -0.55
USP15-202ENST00000312635 UBR2Q8IWV8 1755 aa11.61□□□□□ -0.55
USP15-202ENST00000312635 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
USP15-202ENST00000312635 HDGFL1Q5TGJ6 251 aa11.61□□□□□ -0.55
USP15-202ENST00000312635 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
USP15-202ENST00000312635 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
USP15-202ENST00000312635 ERBB4Q15303 1308 aa11.61□□□□□ -0.55
USP15-202ENST00000312635 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
USP15-202ENST00000312635 MS4A1P11836 297 aa11.6□□□□□ -0.55
USP15-202ENST00000312635 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
USP15-202ENST00000312635 BCAR3O75815 825 aa11.6□□□□□ -0.55
USP15-202ENST00000312635 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
USP15-202ENST00000312635 ARHGAP45Q92619 1136 aa11.6□□□□□ -0.55
USP15-202ENST00000312635 KCNQ2O43526 872 aa11.59□□□□□ -0.55
USP15-202ENST00000312635 NEFLP07196 543 aa11.59□□□□□ -0.55
USP15-202ENST00000312635 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
USP15-202ENST00000312635 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
USP15-202ENST00000312635 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
USP15-202ENST00000312635 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
USP15-202ENST00000312635 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
USP15-202ENST00000312635 CICQ96RK0 1608 aaPredicted RBP11.58□□□□□ -0.56
USP15-202ENST00000312635 PTCD1O75127 700 aaKnown RBP11.58□□□□□ -0.56
USP15-202ENST00000312635 EIF2S2P20042 333 aaKnown RBP11.58□□□□□ -0.56
USP15-202ENST00000312635 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
USP15-202ENST00000312635 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
USP15-202ENST00000312635 PTPRCP08575 1304 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 STARD3NLO95772 234 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 API5Q9BZZ5 524 aaKnown RBP11.57□□□□□ -0.56
USP15-202ENST00000312635 HYPKQ9NX55 129 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
USP15-202ENST00000312635 LOC102724428A0A0B4J2F2 783 aa11.56□□□□□ -0.56
USP15-202ENST00000312635 SIK1P57059 783 aa11.56□□□□□ -0.56
USP15-202ENST00000312635 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
USP15-202ENST00000312635 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP15-202ENST00000312635 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms