RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SCN11AQ9UI33 1791 aa16.08■□□□□ 0.16
SCFD1-201ENST00000311943 FCHSD2O94868 740 aa16.07■□□□□ 0.16
SCFD1-201ENST00000311943 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
SCFD1-201ENST00000311943 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
SCFD1-201ENST00000311943 KCNQ3O43525 872 aa16.07■□□□□ 0.16
SCFD1-201ENST00000311943 LOC102724428A0A0B4J2F2 783 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 SIK1P57059 783 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 LINC00116Q8NCU8 138 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 SLC52A2Q9HAB3 445 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
SCFD1-201ENST00000311943 GNAT3A8MTJ3 354 aa16.05■□□□□ 0.16
SCFD1-201ENST00000311943 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
SCFD1-201ENST00000311943 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
SCFD1-201ENST00000311943 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
SCFD1-201ENST00000311943 TUBGCP6Q96RT7 1819 aa16.04■□□□□ 0.16
SCFD1-201ENST00000311943 ATP6V1AP38606 617 aa16.04■□□□□ 0.16
SCFD1-201ENST00000311943 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
SCFD1-201ENST00000311943 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
SCFD1-201ENST00000311943 GOLGB1Q14789 3259 aaKnown RBP16.03■□□□□ 0.16
SCFD1-201ENST00000311943 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
SCFD1-201ENST00000311943 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
SCFD1-201ENST00000311943 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
SCFD1-201ENST00000311943 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
SCFD1-201ENST00000311943 UTRNP46939 3433 aa16.02■□□□□ 0.16
SCFD1-201ENST00000311943 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.16
SCFD1-201ENST00000311943 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
SCFD1-201ENST00000311943 PHF14O94880 888 aa16.02■□□□□ 0.15
SCFD1-201ENST00000311943 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.15
SCFD1-201ENST00000311943 C5P01031 1676 aa16.01■□□□□ 0.15
SCFD1-201ENST00000311943 PRAMEF22A3QJZ6 481 aa16.01■□□□□ 0.15
SCFD1-201ENST00000311943 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
SCFD1-201ENST00000311943 ANP32CO43423 234 aa16.01■□□□□ 0.15
SCFD1-201ENST00000311943 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
SCFD1-201ENST00000311943 MRC1P22897 1456 aa16■□□□□ 0.15
SCFD1-201ENST00000311943 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
SCFD1-201ENST00000311943 CASZ1Q86V15 1759 aa16■□□□□ 0.15
SCFD1-201ENST00000311943 DNAJC10Q8IXB1 793 aa15.99■□□□□ 0.15
SCFD1-201ENST00000311943 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
SCFD1-201ENST00000311943 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCFD1-201ENST00000311943 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
SCFD1-201ENST00000311943 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
SCFD1-201ENST00000311943 TEFQ10587 303 aa15.98■□□□□ 0.15
SCFD1-201ENST00000311943 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
SCFD1-201ENST00000311943 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
SCFD1-201ENST00000311943 MRS2Q9HD23 443 aa15.98■□□□□ 0.15
SCFD1-201ENST00000311943 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
SCFD1-201ENST00000311943 MSH5O43196 834 aa15.97■□□□□ 0.15
SCFD1-201ENST00000311943 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-201ENST00000311943 SIPA1L3O60292 1781 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-201ENST00000311943 TMPOP42166 694 aaKnown RBP15.97■□□□□ 0.15
SCFD1-201ENST00000311943 RIPK4P57078 832 aa15.97■□□□□ 0.15
SCFD1-201ENST00000311943 MYH14Q7Z406 1995 aaKnown RBP15.97■□□□□ 0.15
SCFD1-201ENST00000311943 MAPK8IP3Q9UPT6 1336 aa15.96■□□□□ 0.15
SCFD1-201ENST00000311943 TJP1Q07157 1748 aa15.96■□□□□ 0.15
SCFD1-201ENST00000311943 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
SCFD1-201ENST00000311943 GNPATO15228 680 aa15.95■□□□□ 0.14
SCFD1-201ENST00000311943 PTGER2P43116 358 aa15.95■□□□□ 0.14
SCFD1-201ENST00000311943 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
SCFD1-201ENST00000311943 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
SCFD1-201ENST00000311943 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
SCFD1-201ENST00000311943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
SCFD1-201ENST00000311943 APAF1O14727 1248 aa15.95■□□□□ 0.14
SCFD1-201ENST00000311943 TRIM35Q9UPQ4 493 aa15.95■□□□□ 0.14
SCFD1-201ENST00000311943 AK7Q96M32 723 aa15.94■□□□□ 0.14
SCFD1-201ENST00000311943 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
SCFD1-201ENST00000311943 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
SCFD1-201ENST00000311943 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
SCFD1-201ENST00000311943 COL5A3P25940 1745 aaPredicted RBP15.93■□□□□ 0.14
SCFD1-201ENST00000311943 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
SCFD1-201ENST00000311943 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
SCFD1-201ENST00000311943 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
SCFD1-201ENST00000311943 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
SCFD1-201ENST00000311943 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
SCFD1-201ENST00000311943 SGIP1Q9BQI5 828 aa15.92■□□□□ 0.14
SCFD1-201ENST00000311943 UBR2Q8IWV8 1755 aa15.92■□□□□ 0.14
SCFD1-201ENST00000311943 NEFMP07197 916 aa15.91■□□□□ 0.14
SCFD1-201ENST00000311943 CYP19A1P11511 503 aaPredicted RBP15.91■□□□□ 0.14
SCFD1-201ENST00000311943 SPON1Q9HCB6 807 aa15.91■□□□□ 0.14
SCFD1-201ENST00000311943 ZBTB1Q9Y2K1 713 aa15.91■□□□□ 0.14
SCFD1-201ENST00000311943 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
SCFD1-201ENST00000311943 SRP68Q9UHB9 627 aaKnown RBP15.9■□□□□ 0.14
SCFD1-201ENST00000311943 A1BGP04217 495 aa15.9■□□□□ 0.14
SCFD1-201ENST00000311943 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
SCFD1-201ENST00000311943 ARHGEF1Q92888 912 aaKnown RBP15.9■□□□□ 0.14
SCFD1-201ENST00000311943 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
SCFD1-201ENST00000311943 LAS1LQ9Y4W2 734 aaKnown RBP15.89■□□□□ 0.13
SCFD1-201ENST00000311943 HEG1Q9ULI3 1381 aa15.89■□□□□ 0.13
SCFD1-201ENST00000311943 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
SCFD1-201ENST00000311943 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
SCFD1-201ENST00000311943 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
SCFD1-201ENST00000311943 LRP5O75197 1615 aa15.87■□□□□ 0.13
SCFD1-201ENST00000311943 MIER1Q8N108 512 aa15.87■□□□□ 0.13
SCFD1-201ENST00000311943 RTCBQ9Y3I0 505 aaKnown RBP15.87■□□□□ 0.13
SCFD1-201ENST00000311943 CNTNAP4Q9C0A0 1308 aa15.86■□□□□ 0.13
SCFD1-201ENST00000311943 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
SCFD1-201ENST00000311943 KLHL34Q8N239 644 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms