RNA–Protein interactions for RNA: ENST00000311925.6

CCL19-201, Transcript of C-C motif chemokine ligand 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL19, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-201ENST00000311925 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
CCL19-201ENST00000311925 DDB1Q16531 1140 aa18.38■□□□□ 0.53
CCL19-201ENST00000311925 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
CCL19-201ENST00000311925 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
CCL19-201ENST00000311925 EZH2Q15910 746 aaKnown RBP18.36■□□□□ 0.53
CCL19-201ENST00000311925 ALDH1L2Q3SY69 923 aa18.36■□□□□ 0.53
CCL19-201ENST00000311925 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
CCL19-201ENST00000311925 SOS1Q07889 1333 aaPredicted RBP18.35■□□□□ 0.53
CCL19-201ENST00000311925 APBA3O96018 575 aa18.35■□□□□ 0.53
CCL19-201ENST00000311925 TAF7Q15545 349 aaPredicted RBP18.35■□□□□ 0.53
CCL19-201ENST00000311925 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
CCL19-201ENST00000311925 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
CCL19-201ENST00000311925 MS4A1P11836 297 aa18.34■□□□□ 0.53
CCL19-201ENST00000311925 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
CCL19-201ENST00000311925 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
CCL19-201ENST00000311925 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
CCL19-201ENST00000311925 RREB1Q92766 1687 aa18.34■□□□□ 0.53
CCL19-201ENST00000311925 IRX6P78412 446 aaPredicted RBP18.33■□□□□ 0.52
CCL19-201ENST00000311925 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
CCL19-201ENST00000311925 BCAR3O75815 825 aa18.32■□□□□ 0.52
CCL19-201ENST00000311925 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
CCL19-201ENST00000311925 PDE3AQ14432 1141 aa18.32■□□□□ 0.52
CCL19-201ENST00000311925 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
CCL19-201ENST00000311925 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
CCL19-201ENST00000311925 TSPYL4Q9UJ04 414 aa18.32■□□□□ 0.52
CCL19-201ENST00000311925 MEGF6O75095 1541 aa18.32■□□□□ 0.52
CCL19-201ENST00000311925 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 LRP5O75197 1615 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 PLSCR1O15162 318 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 VAMP4O75379 141 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 IL2RBP14784 551 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
CCL19-201ENST00000311925 TEFQ10587 303 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
CCL19-201ENST00000311925 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
CCL19-201ENST00000311925 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 TNS2Q63HR2 1409 aa18.31■□□□□ 0.52
CCL19-201ENST00000311925 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
CCL19-201ENST00000311925 EXOC5O00471 708 aa18.3■□□□□ 0.52
CCL19-201ENST00000311925 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
CCL19-201ENST00000311925 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
CCL19-201ENST00000311925 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
CCL19-201ENST00000311925 PHKG2P15735 406 aa18.29■□□□□ 0.52
CCL19-201ENST00000311925 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
CCL19-201ENST00000311925 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
CCL19-201ENST00000311925 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
CCL19-201ENST00000311925 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
CCL19-201ENST00000311925 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
CCL19-201ENST00000311925 PLIN1O60240 522 aa18.28■□□□□ 0.52
CCL19-201ENST00000311925 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
CCL19-201ENST00000311925 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.52
CCL19-201ENST00000311925 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
CCL19-201ENST00000311925 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
CCL19-201ENST00000311925 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
CCL19-201ENST00000311925 AAMPQ13685 434 aa18.26■□□□□ 0.51
CCL19-201ENST00000311925 R3HDM1Q15032 1099 aaKnown RBP18.26■□□□□ 0.51
CCL19-201ENST00000311925 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
CCL19-201ENST00000311925 PTF1AQ7RTS3 328 aa18.26■□□□□ 0.51
CCL19-201ENST00000311925 C8orf58Q8NAV2 365 aa18.26■□□□□ 0.51
CCL19-201ENST00000311925 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
CCL19-201ENST00000311925 SCN11AQ9UI33 1791 aa18.26■□□□□ 0.51
CCL19-201ENST00000311925 ARHGAP45Q92619 1136 aa18.25■□□□□ 0.51
CCL19-201ENST00000311925 FRAT1Q92837 279 aaPredicted RBP18.25■□□□□ 0.51
CCL19-201ENST00000311925 HOXB7P09629 217 aa18.24■□□□□ 0.51
CCL19-201ENST00000311925 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
CCL19-201ENST00000311925 KDM3BQ7LBC6 1761 aa18.24■□□□□ 0.51
CCL19-201ENST00000311925 SIPA1L3O60292 1781 aaPredicted RBP18.23■□□□□ 0.51
CCL19-201ENST00000311925 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
CCL19-201ENST00000311925 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
CCL19-201ENST00000311925 MRC1P22897 1456 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 CYP27B1O15528 508 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 PROM2Q8N271 834 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
CCL19-201ENST00000311925 CRBNQ96SW2 442 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
CCL19-201ENST00000311925 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
CCL19-201ENST00000311925 ATF7IPQ6VMQ6 1270 aa18.21■□□□□ 0.51
CCL19-201ENST00000311925 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
CCL19-201ENST00000311925 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
CCL19-201ENST00000311925 NHSQ6T4R5 1651 aa18.2■□□□□ 0.5
CCL19-201ENST00000311925 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
CCL19-201ENST00000311925 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
CCL19-201ENST00000311925 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
CCL19-201ENST00000311925 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
CCL19-201ENST00000311925 NOB1Q9ULX3 412 aaKnown RBP18.2■□□□□ 0.5
CCL19-201ENST00000311925 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
CCL19-201ENST00000311925 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
CCL19-201ENST00000311925 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
CCL19-201ENST00000311925 DZIP1LQ8IYY4 767 aaKnown RBP18.19■□□□□ 0.5
CCL19-201ENST00000311925 KCNQ2O43526 872 aa18.18■□□□□ 0.5
CCL19-201ENST00000311925 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
CCL19-201ENST00000311925 STK31Q9BXU1 1019 aa18.18■□□□□ 0.5
CCL19-201ENST00000311925 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
CCL19-201ENST00000311925 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
CCL19-201ENST00000311925 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
CCL19-201ENST00000311925 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
CCL19-201ENST00000311925 CABP4P57796 275 aa18.17■□□□□ 0.5
CCL19-201ENST00000311925 PTPRCP08575 1304 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms