RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-201ENST00000311745 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-201ENST00000311745 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
RBFOX1-201ENST00000311745 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
RBFOX1-201ENST00000311745 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 MRE11P49959 708 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
RBFOX1-201ENST00000311745 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.52
RBFOX1-201ENST00000311745 RGPD5Q99666 1765 aa11.77□□□□□ -0.52
RBFOX1-201ENST00000311745 KRT24Q2M2I5 525 aa11.77□□□□□ -0.52
RBFOX1-201ENST00000311745 THEMISQ8N1K5 641 aaPredicted RBP11.77□□□□□ -0.52
RBFOX1-201ENST00000311745 EID1Q9Y6B2 187 aa11.77□□□□□ -0.52
RBFOX1-201ENST00000311745 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
RBFOX1-201ENST00000311745 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
RBFOX1-201ENST00000311745 OFD1O75665 1012 aa11.77□□□□□ -0.53
RBFOX1-201ENST00000311745 TAF3Q5VWG9 929 aa11.77□□□□□ -0.53
RBFOX1-201ENST00000311745 SULT6B1Q6IMI4 303 aa11.77□□□□□ -0.53
RBFOX1-201ENST00000311745 CHL1O00533 1208 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 ARHGAP45Q92619 1136 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 KIF16BQ96L93 1317 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 FLT4P35916 1363 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
RBFOX1-201ENST00000311745 SETD1BQ9UPS6 1966 aaKnown RBP11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 SLIT3O75094 1523 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 FOXO3O43524 673 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 GNAI1P63096 354 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 DDX19BQ9UMR2 479 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 MSH6P52701 1360 aa11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
RBFOX1-201ENST00000311745 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 ZNF526Q8TF50 670 aaPredicted RBP11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 DNAJC2Q99543 621 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 KIAA0232Q92628 1395 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 PTMSP20962 102 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 MCM10Q7L590 875 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 ITPRIPQ8IWB1 547 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 CACNA1FO60840 1977 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 XIRP1Q702N8 1843 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 ADGRL3Q9HAR2 1447 aa11.74□□□□□ -0.53
RBFOX1-201ENST00000311745 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-201ENST00000311745 EYA1Q99502 592 aa11.73□□□□□ -0.53
RBFOX1-201ENST00000311745 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-201ENST00000311745 RWDD1Q9H446 243 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-201ENST00000311745 FSD2A1L4K1 749 aa11.72□□□□□ -0.53
RBFOX1-201ENST00000311745 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-201ENST00000311745 NUCB1Q02818 461 aa11.72□□□□□ -0.53
RBFOX1-201ENST00000311745 KIF24Q5T7B8 1368 aa11.72□□□□□ -0.53
RBFOX1-201ENST00000311745 ELL2O00472 640 aaPredicted RBP11.71□□□□□ -0.53
RBFOX1-201ENST00000311745 COL18A1P39060 1754 aa11.71□□□□□ -0.53
RBFOX1-201ENST00000311745 HOXC9P31274 260 aa11.71□□□□□ -0.53
RBFOX1-201ENST00000311745 LOC102724159A0A0B4J2E5 919 aa11.71□□□□□ -0.54
RBFOX1-201ENST00000311745 PWP2Q15269 919 aaKnown RBP11.71□□□□□ -0.54
RBFOX1-201ENST00000311745 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 TSC1Q92574 1164 aa11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 MST1RQ04912 1400 aa11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 ZSCAN30Q86W11 494 aa11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
RBFOX1-201ENST00000311745 DYNC1I1O14576 645 aa11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 ZNF622Q969S3 477 aaKnown RBP eCLIP11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 PSEN1P49768 467 aa11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 BECN1Q14457 450 aa11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 MPNDQ8N594 471 aa11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
RBFOX1-201ENST00000311745 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 INTS3Q68E01 1043 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 TRAK2O60296 914 aa11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
RBFOX1-201ENST00000311745 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
RBFOX1-201ENST00000311745 ANTXR1Q9H6X2 564 aa11.67□□□□□ -0.54
RBFOX1-201ENST00000311745 PXDNQ92626 1479 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 CEMIPQ8WUJ3 1361 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 NGDNQ8NEJ9 315 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 ZNF592Q92610 1267 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 ATP2B3Q16720 1220 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 MMP14P50281 582 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 G2E3Q7L622 706 aa11.66□□□□□ -0.54
RBFOX1-201ENST00000311745 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms