RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 FOXD4L4Q8WXT5 416 aaPredicted RBP31.14■■■□□ 2.58
HOXB3-201ENST00000311626 ZBTB7CA1YPR0 619 aa31.13■■■□□ 2.57
HOXB3-201ENST00000311626 ABTB2Q8N961 1025 aa31.13■■■□□ 2.57
HOXB3-201ENST00000311626 LRRFIP2Q9Y608 721 aaKnown RBP31.13■■■□□ 2.57
HOXB3-201ENST00000311626 DDX49Q9Y6V7 483 aaKnown RBP31.13■■■□□ 2.57
HOXB3-201ENST00000311626 NCLP19338 710 aaKnown RBP31.13■■■□□ 2.57
HOXB3-201ENST00000311626 KCNA6P17658 529 aa31.12■■■□□ 2.57
HOXB3-201ENST00000311626 RILPL2Q969X0 211 aa31.12■■■□□ 2.57
HOXB3-201ENST00000311626 TBX22Q9Y458 520 aa31.12■■■□□ 2.57
HOXB3-201ENST00000311626 CCDC30Q5VVM6 783 aa31.12■■■□□ 2.57
HOXB3-201ENST00000311626 FMN2Q9NZ56 1722 aa31.12■■■□□ 2.57
HOXB3-201ENST00000311626 SKOR2Q2VWA4 1001 aaPredicted RBP31.11■■■□□ 2.57
HOXB3-201ENST00000311626 NOL8Q76FK4 1167 aaKnown RBP31.11■■■□□ 2.57
HOXB3-201ENST00000311626 REC8O95072 547 aa31.11■■■□□ 2.57
HOXB3-201ENST00000311626 PHAXQ9H814 394 aaKnown RBP31.11■■■□□ 2.57
HOXB3-201ENST00000311626 TRIM6-TRIM34B2RNG4 842 aa31.1■■■□□ 2.57
HOXB3-201ENST00000311626 LRRCC1Q9C099 1032 aa31.1■■■□□ 2.57
HOXB3-201ENST00000311626 DIP2AQ14689 1571 aa31.1■■■□□ 2.57
HOXB3-201ENST00000311626 GOLGA6L22H0YM25 854 aa31.09■■■□□ 2.57
HOXB3-201ENST00000311626 ST18O60284 1047 aa31.09■■■□□ 2.57
HOXB3-201ENST00000311626 IL1RAPL2Q9NP60 686 aa31.09■■■□□ 2.57
HOXB3-201ENST00000311626 PIK3C2AO00443 1686 aa31.08■■■□□ 2.57
HOXB3-201ENST00000311626 EIF2S2P20042 333 aaKnown RBP31.08■■■□□ 2.57
HOXB3-201ENST00000311626 UNC5CLQ8IV45 518 aa31.07■■■□□ 2.56
HOXB3-201ENST00000311626 NEK4P51957 841 aa31.07■■■□□ 2.56
HOXB3-201ENST00000311626 ATP8B2P98198 1209 aa31.07■■■□□ 2.56
HOXB3-201ENST00000311626 OSBPL3Q9H4L5 887 aa31.07■■■□□ 2.56
HOXB3-201ENST00000311626 MX1P20591 662 aa31.06■■■□□ 2.56
HOXB3-201ENST00000311626 PALD1Q9ULE6 856 aa31.06■■■□□ 2.56
HOXB3-201ENST00000311626 MAP4K4O95819 1239 aaPredicted RBP31.05■■■□□ 2.56
HOXB3-201ENST00000311626 GNAI3P08754 354 aa31.05■■■□□ 2.56
HOXB3-201ENST00000311626 TAF7Q15545 349 aaPredicted RBP31.05■■■□□ 2.56
HOXB3-201ENST00000311626 USP44Q9H0E7 712 aa31.04■■■□□ 2.56
HOXB3-201ENST00000311626 ZDHHC9Q9Y397 364 aa31.04■■■□□ 2.56
HOXB3-201ENST00000311626 SALL3Q9BXA9 1300 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 NUTM1Q86Y26 1132 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 ESYT1Q9BSJ8 1104 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 CYP2E1P05181 493 aaPredicted RBP31.03■■■□□ 2.56
HOXB3-201ENST00000311626 NUCB2P80303 420 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 HDGFL1Q5TGJ6 251 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 ANO2Q9NQ90 1003 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 ERBB4Q15303 1308 aa31.03■■■□□ 2.56
HOXB3-201ENST00000311626 MAP3K5Q99683 1374 aa31.02■■■□□ 2.56
HOXB3-201ENST00000311626 CAVIN1Q6NZI2 390 aaKnown RBP31.02■■■□□ 2.56
HOXB3-201ENST00000311626 ANXA1P04083 346 aa31.01■■■□□ 2.56
HOXB3-201ENST00000311626 CLEC17AQ6ZS10 378 aa31.01■■■□□ 2.56
HOXB3-201ENST00000311626 LGR6Q9HBX8 967 aa31.01■■■□□ 2.56
HOXB3-201ENST00000311626 SETD1BQ9UPS6 1966 aaKnown RBP31.01■■■□□ 2.55
HOXB3-201ENST00000311626 HTATSF1O43719 755 aaKnown RBP31■■■□□ 2.55
HOXB3-201ENST00000311626 PRPF40AO75400 957 aaKnown RBP31■■■□□ 2.55
HOXB3-201ENST00000311626 KLHL40Q2TBA0 621 aa31■■■□□ 2.55
HOXB3-201ENST00000311626 LMBRD1Q9NUN5 540 aa31■■■□□ 2.55
HOXB3-201ENST00000311626 THEMISQ8N1K5 641 aaPredicted RBP31■■■□□ 2.55
HOXB3-201ENST00000311626 IL25Q9H293 177 aa31■■■□□ 2.55
HOXB3-201ENST00000311626 KCNQ3O43525 872 aa30.99■■■□□ 2.55
HOXB3-201ENST00000311626 UBTFL1P0CB47 393 aaPredicted RBP30.99■■■□□ 2.55
HOXB3-201ENST00000311626 PTMSP20962 102 aa30.99■■■□□ 2.55
HOXB3-201ENST00000311626 CHMLP26374 656 aa30.99■■■□□ 2.55
HOXB3-201ENST00000311626 RBM27Q9P2N5 1060 aaKnown RBP30.98■■■□□ 2.55
HOXB3-201ENST00000311626 IBTKQ9P2D0 1353 aaPredicted RBP30.98■■■□□ 2.55
HOXB3-201ENST00000311626 TMX3Q96JJ7 454 aa30.97■■■□□ 2.55
HOXB3-201ENST00000311626 NWD1Q149M9 1564 aa30.97■■■□□ 2.55
HOXB3-201ENST00000311626 UPF3BQ9BZI7 483 aaKnown RBP30.96■■■□□ 2.55
HOXB3-201ENST00000311626 ISY1Q9ULR0 285 aaKnown RBP30.96■■■□□ 2.55
HOXB3-201ENST00000311626 NBPF6Q5VWK0 638 aa30.95■■■□□ 2.55
HOXB3-201ENST00000311626 NBPF4Q96M43 638 aa30.95■■■□□ 2.55
HOXB3-201ENST00000311626 PPP1R42Q7Z4L9 355 aa30.95■■■□□ 2.55
HOXB3-201ENST00000311626 CWC22Q9HCG8 908 aaKnown RBP30.95■■■□□ 2.55
HOXB3-201ENST00000311626 SURF6O75683 361 aaKnown RBP30.94■■■□□ 2.54
HOXB3-201ENST00000311626 ARHGAP23Q9P227 1491 aa30.94■■■□□ 2.54
HOXB3-201ENST00000311626 FOXD4L6Q3SYB3 417 aaPredicted RBP30.94■■■□□ 2.54
HOXB3-201ENST00000311626 FOXD4L3Q6VB84 417 aaPredicted RBP30.94■■■□□ 2.54
HOXB3-201ENST00000311626 LRRC59Q96AG4 307 aaKnown RBP30.93■■■□□ 2.54
HOXB3-201ENST00000311626 TRIM44Q96DX7 344 aaPredicted RBP30.93■■■□□ 2.54
HOXB3-201ENST00000311626 XRN1Q8IZH2 1706 aaKnown RBP30.93■■■□□ 2.54
HOXB3-201ENST00000311626 SLIT1O75093 1534 aa30.93■■■□□ 2.54
HOXB3-201ENST00000311626 NBPF7P0C2Y1 421 aaPredicted RBP30.93■■■□□ 2.54
HOXB3-201ENST00000311626 NASPP49321 788 aaPredicted RBP30.93■■■□□ 2.54
HOXB3-201ENST00000311626 FAM208AQ9UK61 1670 aaKnown RBP30.92■■■□□ 2.54
HOXB3-201ENST00000311626 GPT2Q8TD30 523 aa30.92■■■□□ 2.54
HOXB3-201ENST00000311626 CHPF2Q9P2E5 772 aa30.92■■■□□ 2.54
HOXB3-201ENST00000311626 ESPNB1AK53 854 aa30.92■■■□□ 2.54
HOXB3-201ENST00000311626 NSFL1CQ9UNZ2 370 aaKnown RBP30.92■■■□□ 2.54
HOXB3-201ENST00000311626 CLCN1P35523 988 aa30.91■■■□□ 2.54
HOXB3-201ENST00000311626 ZSCAN23Q3MJ62 389 aa30.91■■■□□ 2.54
HOXB3-201ENST00000311626 NAP1L5Q96NT1 182 aaPredicted RBP30.9■■■□□ 2.54
HOXB3-201ENST00000311626 PHF8Q9UPP1 1060 aa30.9■■■□□ 2.54
HOXB3-201ENST00000311626 SRCIN1Q9C0H9 1055 aa30.89■■■□□ 2.54
HOXB3-201ENST00000311626 SRGAP3O43295 1099 aa30.89■■■□□ 2.53
HOXB3-201ENST00000311626 XPCQ01831 940 aaPredicted RBP30.89■■■□□ 2.53
HOXB3-201ENST00000311626 MPRIPQ6WCQ1 1025 aa30.88■■■□□ 2.53
HOXB3-201ENST00000311626 STAP2Q9UGK3 403 aa30.88■■■□□ 2.53
HOXB3-201ENST00000311626 LRRC37A3O60309 1634 aa30.88■■■□□ 2.53
HOXB3-201ENST00000311626 PI4KAP2A4QPH2 592 aa30.88■■■□□ 2.53
HOXB3-201ENST00000311626 PI4KAP1Q8N8J0 262 aa30.88■■■□□ 2.53
HOXB3-201ENST00000311626 SSH3Q8TE77 659 aa30.87■■■□□ 2.53
HOXB3-201ENST00000311626 MARF1Q9Y4F3 1742 aaKnown RBP30.87■■■□□ 2.53
HOXB3-201ENST00000311626 EIF4A1P60842 406 aaKnown RBP30.87■■■□□ 2.53
HOXB3-201ENST00000311626 SOS1Q07889 1333 aaPredicted RBP30.87■■■□□ 2.53
HOXB3-201ENST00000311626 MCCP23508 829 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms