RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
NPAS4-201ENST00000311034 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
NPAS4-201ENST00000311034 RIMS2Q9UQ26 1411 aa16.42■□□□□ 0.22
NPAS4-201ENST00000311034 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
NPAS4-201ENST00000311034 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
NPAS4-201ENST00000311034 CPA1P15085 419 aa16.41■□□□□ 0.22
NPAS4-201ENST00000311034 NLRP6P59044 892 aa16.41■□□□□ 0.22
NPAS4-201ENST00000311034 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
NPAS4-201ENST00000311034 PNPLA6Q8IY17 1366 aa16.41■□□□□ 0.22
NPAS4-201ENST00000311034 FIBPO43427 364 aa16.4■□□□□ 0.22
NPAS4-201ENST00000311034 ABCC3O15438 1527 aa16.4■□□□□ 0.22
NPAS4-201ENST00000311034 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
NPAS4-201ENST00000311034 ARHGEF28Q8N1W1 1705 aaKnown RBP16.4■□□□□ 0.22
NPAS4-201ENST00000311034 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
NPAS4-201ENST00000311034 SASS6Q6UVJ0 657 aa16.4■□□□□ 0.22
NPAS4-201ENST00000311034 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
NPAS4-201ENST00000311034 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
NPAS4-201ENST00000311034 ZFYVE9O95405 1425 aa16.39■□□□□ 0.21
NPAS4-201ENST00000311034 POGZQ7Z3K3 1410 aa16.39■□□□□ 0.21
NPAS4-201ENST00000311034 USP48Q86UV5 1035 aa16.39■□□□□ 0.21
NPAS4-201ENST00000311034 KDM4AO75164 1064 aa16.39■□□□□ 0.21
NPAS4-201ENST00000311034 TCEANC2Q96MN5 208 aa16.39■□□□□ 0.21
NPAS4-201ENST00000311034 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
NPAS4-201ENST00000311034 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
NPAS4-201ENST00000311034 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
NPAS4-201ENST00000311034 ZHX1Q9UKY1 873 aaPredicted RBP16.38■□□□□ 0.21
NPAS4-201ENST00000311034 MX1P20591 662 aa16.38■□□□□ 0.21
NPAS4-201ENST00000311034 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
NPAS4-201ENST00000311034 LRRCC1Q9C099 1032 aa16.37■□□□□ 0.21
NPAS4-201ENST00000311034 SIL1Q9H173 461 aa16.37■□□□□ 0.21
NPAS4-201ENST00000311034 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
NPAS4-201ENST00000311034 NEXMIFQ5QGS0 1516 aa16.37■□□□□ 0.21
NPAS4-201ENST00000311034 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
NPAS4-201ENST00000311034 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
NPAS4-201ENST00000311034 GNAI2P04899 355 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 MAP7D2Q96T17 732 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 PHF14O94880 888 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 BRD1O95696 1058 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 CWC27Q6UX04 472 aaKnown RBP16.36■□□□□ 0.21
NPAS4-201ENST00000311034 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
NPAS4-201ENST00000311034 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
NPAS4-201ENST00000311034 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
NPAS4-201ENST00000311034 DYNC1I1O14576 645 aa16.35■□□□□ 0.21
NPAS4-201ENST00000311034 ADCY5O95622 1261 aa16.35■□□□□ 0.21
NPAS4-201ENST00000311034 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
NPAS4-201ENST00000311034 ATP10DQ9P241 1426 aa16.35■□□□□ 0.21
NPAS4-201ENST00000311034 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
NPAS4-201ENST00000311034 FGD1P98174 961 aa16.34■□□□□ 0.21
NPAS4-201ENST00000311034 PTPRMP28827 1452 aa16.34■□□□□ 0.21
NPAS4-201ENST00000311034 CBX1P83916 185 aa16.34■□□□□ 0.21
NPAS4-201ENST00000311034 STK3Q13188 491 aa16.34■□□□□ 0.21
NPAS4-201ENST00000311034 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.2
NPAS4-201ENST00000311034 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
NPAS4-201ENST00000311034 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
NPAS4-201ENST00000311034 CHMLP26374 656 aa16.33■□□□□ 0.2
NPAS4-201ENST00000311034 MCM2P49736 904 aa16.33■□□□□ 0.2
NPAS4-201ENST00000311034 GIMAP6Q6P9H5 292 aa16.33■□□□□ 0.2
NPAS4-201ENST00000311034 MLH3Q9UHC1 1453 aa16.32■□□□□ 0.2
NPAS4-201ENST00000311034 WASLO00401 505 aaPredicted RBP16.32■□□□□ 0.2
NPAS4-201ENST00000311034 SRCIN1Q9C0H9 1055 aa16.32■□□□□ 0.2
NPAS4-201ENST00000311034 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
NPAS4-201ENST00000311034 MCM5P33992 734 aa16.32■□□□□ 0.2
NPAS4-201ENST00000311034 CHL1O00533 1208 aa16.31■□□□□ 0.2
NPAS4-201ENST00000311034 TERF1P54274 439 aa16.31■□□□□ 0.2
NPAS4-201ENST00000311034 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
NPAS4-201ENST00000311034 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
NPAS4-201ENST00000311034 PTPRCP08575 1304 aa16.31■□□□□ 0.2
NPAS4-201ENST00000311034 NOLC1Q14978 699 aaKnown RBP eCLIP16.31■□□□□ 0.2
NPAS4-201ENST00000311034 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
NPAS4-201ENST00000311034 IL25Q9H293 177 aa16.3■□□□□ 0.2
NPAS4-201ENST00000311034 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
NPAS4-201ENST00000311034 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
NPAS4-201ENST00000311034 KNDC1Q76NI1 1749 aa16.3■□□□□ 0.2
NPAS4-201ENST00000311034 ABTB2Q8N961 1025 aa16.3■□□□□ 0.2
NPAS4-201ENST00000311034 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
NPAS4-201ENST00000311034 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
NPAS4-201ENST00000311034 SRGAP3O43295 1099 aa16.29■□□□□ 0.2
NPAS4-201ENST00000311034 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
NPAS4-201ENST00000311034 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
NPAS4-201ENST00000311034 UBTFL1P0CB47 393 aaPredicted RBP16.29■□□□□ 0.2
NPAS4-201ENST00000311034 CAMK4Q16566 473 aa16.28■□□□□ 0.2
NPAS4-201ENST00000311034 CCDC183Q5T5S1 534 aa16.28■□□□□ 0.2
NPAS4-201ENST00000311034 HDGFL1Q5TGJ6 251 aa16.28■□□□□ 0.2
NPAS4-201ENST00000311034 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
NPAS4-201ENST00000311034 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
NPAS4-201ENST00000311034 MTHFSDQ2M296 383 aaKnown RBP16.28■□□□□ 0.2
NPAS4-201ENST00000311034 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
NPAS4-201ENST00000311034 GOLGA6L4A6NEF3 574 aa16.27■□□□□ 0.2
NPAS4-201ENST00000311034 FLIIQ13045 1269 aa16.27■□□□□ 0.2
NPAS4-201ENST00000311034 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.2
NPAS4-201ENST00000311034 PIK3C2BO00750 1634 aa16.27■□□□□ 0.2
NPAS4-201ENST00000311034 ZBTB9Q96C00 473 aa16.27■□□□□ 0.2
NPAS4-201ENST00000311034 IGSF3O75054 1194 aa16.26■□□□□ 0.19
NPAS4-201ENST00000311034 CUL4AQ13619 759 aa16.26■□□□□ 0.19
NPAS4-201ENST00000311034 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
NPAS4-201ENST00000311034 GNAI3P08754 354 aa16.26■□□□□ 0.19
NPAS4-201ENST00000311034 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
NPAS4-201ENST00000311034 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms