RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 TRAK2O60296 914 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 CUL5Q93034 780 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
VCPIP1-201ENST00000310421 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 KIF20AO95235 890 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 MCM3P25205 808 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 RNF41Q9H4P4 317 aaPredicted RBP13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 RALGAPBQ86X10 1494 aa13.24□□□□□ -0.29
VCPIP1-201ENST00000310421 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 TSG101Q99816 390 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 SH2B1Q9NRF2 756 aaPredicted RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 NCOA1Q15788 1441 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 FEZ1Q99689 392 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 TSPYL1Q9H0U9 437 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
VCPIP1-201ENST00000310421 NFKBIBQ15653 356 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 SLC5A1P13866 664 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 TAF4BQ92750 862 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 ALDH1L2Q3SY69 923 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 KIF1BPQ96EK5 621 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 CRACR2BQ8N4Y2 399 aaPredicted RBP13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 DZIP1Q86YF9 867 aaKnown RBP13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
VCPIP1-201ENST00000310421 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 A0A087WZG4 1122 aa13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 MAP3K12Q12852 859 aa13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 MAP9Q49MG5 647 aa13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 KIAA1328Q86T90 577 aa13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
VCPIP1-201ENST00000310421 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.3
VCPIP1-201ENST00000310421 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.3
VCPIP1-201ENST00000310421 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 EIF5P55010 431 aaKnown RBP13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 NUP62CLQ9H1M0 184 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 USP5P45974 858 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 CETN1Q12798 172 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 FKBP15Q5T1M5 1219 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 KIF5BP33176 963 aa13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
VCPIP1-201ENST00000310421 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 ANAPC15P60006 121 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 SPA17Q15506 151 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 NAPBQ9H115 298 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 STK3Q13188 491 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 SPTY2D1Q68D10 685 aaPredicted RBP13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 PTPRCP08575 1304 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 ANKRD62A6NC57 917 aa13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
VCPIP1-201ENST00000310421 KIF1BO60333 1816 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 FANCAO15360 1455 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 USP8P40818 1118 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 MX1P20591 662 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms