RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 SLC4A10Q6U841 1118 aa25.19■■□□□ 1.62
SSH3-202ENST00000308298 OVOS2A0A0G2JMS6 1433 aa25.18■■□□□ 1.62
SSH3-202ENST00000308298 BMP2KLQ5H9B9 411 aa25.18■■□□□ 1.62
SSH3-202ENST00000308298 NPHP3Q7Z494 1330 aa25.17■■□□□ 1.62
SSH3-202ENST00000308298 ERBB3P21860 1342 aa25.17■■□□□ 1.62
SSH3-202ENST00000308298 FKBP5Q13451 457 aaPredicted RBP25.17■■□□□ 1.62
SSH3-202ENST00000308298 C1orf141Q5JVX7 400 aa25.17■■□□□ 1.62
SSH3-202ENST00000308298 NECTIN2Q92692 538 aa25.17■■□□□ 1.62
SSH3-202ENST00000308298 ZC3H6P61129 1189 aaKnown RBP25.16■■□□□ 1.62
SSH3-202ENST00000308298 TEFQ10587 303 aa25.16■■□□□ 1.62
SSH3-202ENST00000308298 CRYBG1Q9Y4K1 1723 aa25.16■■□□□ 1.62
SSH3-202ENST00000308298 PXDNLA1KZ92 1463 aa25.16■■□□□ 1.62
SSH3-202ENST00000308298 HDGFL1Q5TGJ6 251 aa25.15■■□□□ 1.62
SSH3-202ENST00000308298 DDX17Q92841 729 aaKnown RBP25.15■■□□□ 1.62
SSH3-202ENST00000308298 COL18A1P39060 1754 aa25.15■■□□□ 1.62
SSH3-202ENST00000308298 LMTK3Q96Q04 1460 aa25.15■■□□□ 1.62
SSH3-202ENST00000308298 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
SSH3-202ENST00000308298 HOXB7P09629 217 aa25.15■■□□□ 1.62
SSH3-202ENST00000308298 EIF4A1P60842 406 aaKnown RBP25.15■■□□□ 1.62
SSH3-202ENST00000308298 SIPA1L3O60292 1781 aaPredicted RBP25.14■■□□□ 1.61
SSH3-202ENST00000308298 MPRIPQ6WCQ1 1025 aa25.13■■□□□ 1.61
SSH3-202ENST00000308298 ADAMTS7Q9UKP4 1686 aa25.13■■□□□ 1.61
SSH3-202ENST00000308298 RNMTO43148 476 aaKnown RBP25.13■■□□□ 1.61
SSH3-202ENST00000308298 MFAP1P55081 439 aaKnown RBP25.12■■□□□ 1.61
SSH3-202ENST00000308298 STRCQ7RTU9 1775 aa25.12■■□□□ 1.61
SSH3-202ENST00000308298 BTBD11A6QL63 1104 aa25.12■■□□□ 1.61
SSH3-202ENST00000308298 BECN1Q14457 450 aa25.12■■□□□ 1.61
SSH3-202ENST00000308298 CHMP4AQ9BY43 222 aa25.12■■□□□ 1.61
SSH3-202ENST00000308298 ABCC6O95255 1503 aa25.12■■□□□ 1.61
SSH3-202ENST00000308298 HMMRO75330 724 aa25.1■■□□□ 1.61
SSH3-202ENST00000308298 C22orf23Q9BZE7 217 aa25.1■■□□□ 1.61
SSH3-202ENST00000308298 GNAI2P04899 355 aa25.09■■□□□ 1.61
SSH3-202ENST00000308298 GNAI3P08754 354 aa25.08■■□□□ 1.61
SSH3-202ENST00000308298 KCNQ3O43525 872 aa25.08■■□□□ 1.61
SSH3-202ENST00000308298 RTL5Q5HYW3 569 aaPredicted RBP25.08■■□□□ 1.61
SSH3-202ENST00000308298 SPATA31A3Q5VYP0 1347 aa25.07■■□□□ 1.6
SSH3-202ENST00000308298 EIF2S2P20042 333 aaKnown RBP25.07■■□□□ 1.6
SSH3-202ENST00000308298 PLEKHM2Q8IWE5 1019 aa25.07■■□□□ 1.6
SSH3-202ENST00000308298 PHAXQ9H814 394 aaKnown RBP25.06■■□□□ 1.6
SSH3-202ENST00000308298 SCN11AQ9UI33 1791 aa25.06■■□□□ 1.6
SSH3-202ENST00000308298 RAPGEF4Q8WZA2 1011 aa25.05■■□□□ 1.6
SSH3-202ENST00000308298 NLRP2Q9NX02 1062 aa25.05■■□□□ 1.6
SSH3-202ENST00000308298 CABLES1Q8TDN4 633 aa25.04■■□□□ 1.6
SSH3-202ENST00000308298 CHPF2Q9P2E5 772 aa25.03■■□□□ 1.6
SSH3-202ENST00000308298 USP35Q9P2H5 1018 aa25.02■■□□□ 1.6
SSH3-202ENST00000308298 CPDO75976 1380 aa25.01■■□□□ 1.59
SSH3-202ENST00000308298 PLEKHG2Q9H7P9 1386 aa25.01■■□□□ 1.59
SSH3-202ENST00000308298 HEG1Q9ULI3 1381 aa25.01■■□□□ 1.59
SSH3-202ENST00000308298 GSPT1P15170 499 aaKnown RBP25.01■■□□□ 1.59
SSH3-202ENST00000308298 TATP17735 454 aaPredicted RBP25.01■■□□□ 1.59
SSH3-202ENST00000308298 TTC22Q5TAA0 569 aa25.01■■□□□ 1.59
SSH3-202ENST00000308298 BRINP3Q76B58 766 aa25.01■■□□□ 1.59
SSH3-202ENST00000308298 MEGF6O75095 1541 aa25■■□□□ 1.59
SSH3-202ENST00000308298 TBC1D9Q6ZT07 1266 aa25■■□□□ 1.59
SSH3-202ENST00000308298 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
SSH3-202ENST00000308298 SMARCA5O60264 1052 aaPredicted RBP25■■□□□ 1.59
SSH3-202ENST00000308298 RBM25P49756 843 aaKnown RBP25■■□□□ 1.59
SSH3-202ENST00000308298 APBB1O00213 710 aa24.99■■□□□ 1.59
SSH3-202ENST00000308298 CDC45O75419 566 aa24.99■■□□□ 1.59
SSH3-202ENST00000308298 CSB-PGBD3P0DP91 1061 aa24.99■■□□□ 1.59
SSH3-202ENST00000308298 USP44Q9H0E7 712 aa24.99■■□□□ 1.59
SSH3-202ENST00000308298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.99■■□□□ 1.59
SSH3-202ENST00000308298 PKD1L3Q7Z443 1732 aa24.99■■□□□ 1.59
SSH3-202ENST00000308298 ATP8B2P98198 1209 aa24.98■■□□□ 1.59
SSH3-202ENST00000308298 CHRNA2Q15822 529 aa24.98■■□□□ 1.59
SSH3-202ENST00000308298 TBC1D2Q9BYX2 928 aa24.98■■□□□ 1.59
SSH3-202ENST00000308298 SPG7Q9UQ90 795 aa24.98■■□□□ 1.59
SSH3-202ENST00000308298 GIGYF1O75420 1035 aaPredicted RBP24.98■■□□□ 1.59
SSH3-202ENST00000308298 SRCIN1Q9C0H9 1055 aa24.98■■□□□ 1.59
SSH3-202ENST00000308298 DBF4Q9UBU7 674 aaPredicted RBP24.98■■□□□ 1.59
SSH3-202ENST00000308298 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
SSH3-202ENST00000308298 UBTFL1P0CB47 393 aaPredicted RBP24.97■■□□□ 1.59
SSH3-202ENST00000308298 OTUD7AQ8TE49 926 aaPredicted RBP24.97■■□□□ 1.59
SSH3-202ENST00000308298 LRRFIP2Q9Y608 721 aaKnown RBP24.97■■□□□ 1.59
SSH3-202ENST00000308298 BCL11AQ9H165 835 aa24.96■■□□□ 1.59
SSH3-202ENST00000308298 DNAAF4Q8WXU2 420 aa24.96■■□□□ 1.59
SSH3-202ENST00000308298 PHKG2P15735 406 aa24.95■■□□□ 1.58
SSH3-202ENST00000308298 PNMA6EA0A0J9YXQ4 647 aa24.95■■□□□ 1.58
SSH3-202ENST00000308298 PI4KAP2A4QPH2 592 aa24.94■■□□□ 1.58
SSH3-202ENST00000308298 PI4KAP1Q8N8J0 262 aa24.94■■□□□ 1.58
SSH3-202ENST00000308298 ZNF335Q9H4Z2 1342 aaPredicted RBP24.94■■□□□ 1.58
SSH3-202ENST00000308298 ADCY9O60503 1353 aa24.94■■□□□ 1.58
SSH3-202ENST00000308298 EIF5BO60841 1220 aaKnown RBP24.93■■□□□ 1.58
SSH3-202ENST00000308298 ANXA1P04083 346 aa24.93■■□□□ 1.58
SSH3-202ENST00000308298 EXOC6BQ9Y2D4 811 aa24.93■■□□□ 1.58
SSH3-202ENST00000308298 BEND3Q5T5X7 828 aa24.93■■□□□ 1.58
SSH3-202ENST00000308298 IFNL2Q8IZJ0 200 aa24.93■■□□□ 1.58
SSH3-202ENST00000308298 SLC52A2Q9HAB3 445 aa24.93■■□□□ 1.58
SSH3-202ENST00000308298 C5P01031 1676 aa24.92■■□□□ 1.58
SSH3-202ENST00000308298 NFKBIBQ15653 356 aa24.92■■□□□ 1.58
SSH3-202ENST00000308298 MRC1P22897 1456 aa24.92■■□□□ 1.58
SSH3-202ENST00000308298 SOS2Q07890 1332 aaPredicted RBP24.91■■□□□ 1.58
SSH3-202ENST00000308298 IBTKQ9P2D0 1353 aaPredicted RBP24.91■■□□□ 1.58
SSH3-202ENST00000308298 LRRCC1Q9C099 1032 aa24.91■■□□□ 1.58
SSH3-202ENST00000308298 OSBPL3Q9H4L5 887 aa24.91■■□□□ 1.58
SSH3-202ENST00000308298 SLAIN2Q9P270 581 aa24.91■■□□□ 1.58
SSH3-202ENST00000308298 ABCA3Q99758 1704 aa24.91■■□□□ 1.58
SSH3-202ENST00000308298 PARP4Q9UKK3 1724 aaKnown RBP24.9■■□□□ 1.58
SSH3-202ENST00000308298 PRAMEF22A3QJZ6 481 aa24.9■■□□□ 1.58
SSH3-202ENST00000308298 ZNF790Q6PG37 636 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms