RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
MSRB3-201ENST00000308259 HECW2Q9P2P5 1572 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 CSB-PGBD3P0DP91 1061 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 KIF2CQ99661 725 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 PTPRMP28827 1452 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 C17orf53Q8N3J3 647 aaPredicted RBP12.59□□□□□ -0.39
MSRB3-201ENST00000308259 BANK1Q8NDB2 785 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 MCM5P33992 734 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 PPP1R9BQ96SB3 815 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 ZNF500O60304 480 aaPredicted RBP12.59□□□□□ -0.39
MSRB3-201ENST00000308259 MCM10Q7L590 875 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 COG3Q96JB2 828 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
MSRB3-201ENST00000308259 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.39
MSRB3-201ENST00000308259 GAS2L2Q8NHY3 880 aa12.58□□□□□ -0.4
MSRB3-201ENST00000308259 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
MSRB3-201ENST00000308259 RSPH14Q9UHP6 348 aa12.58□□□□□ -0.4
MSRB3-201ENST00000308259 PIK3C2BO00750 1634 aa12.58□□□□□ -0.4
MSRB3-201ENST00000308259 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
MSRB3-201ENST00000308259 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 GSPT1P15170 499 aaKnown RBP12.57□□□□□ -0.4
MSRB3-201ENST00000308259 IL13P35225 146 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-201ENST00000308259 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
MSRB3-201ENST00000308259 GNAI1P63096 354 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 HS1BP3Q53T59 392 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 TEX35Q5T0J7 233 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 IFT57Q9NWB7 429 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 CHAMP1Q96JM3 812 aa12.57□□□□□ -0.4
MSRB3-201ENST00000308259 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-201ENST00000308259 LOC102724159A0A0B4J2E5 919 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 AMPHP49418 695 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 PWP2Q15269 919 aaKnown RBP12.56□□□□□ -0.4
MSRB3-201ENST00000308259 C10orf67Q8IYJ2 551 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 SPC24Q8NBT2 197 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 MYO5BQ9ULV0 1848 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
MSRB3-201ENST00000308259 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
MSRB3-201ENST00000308259 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
MSRB3-201ENST00000308259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
MSRB3-201ENST00000308259 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
MSRB3-201ENST00000308259 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
MSRB3-201ENST00000308259 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
MSRB3-201ENST00000308259 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
MSRB3-201ENST00000308259 NECTIN2Q92692 538 aa12.54□□□□□ -0.4
MSRB3-201ENST00000308259 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
MSRB3-201ENST00000308259 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
MSRB3-201ENST00000308259 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
MSRB3-201ENST00000308259 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
MSRB3-201ENST00000308259 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-201ENST00000308259 PKP1Q13835 747 aa12.54□□□□□ -0.4
MSRB3-201ENST00000308259 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.4
MSRB3-201ENST00000308259 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-201ENST00000308259 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
MSRB3-201ENST00000308259 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
MSRB3-201ENST00000308259 PLEKHM2Q8IWE5 1019 aa12.53□□□□□ -0.4
MSRB3-201ENST00000308259 FEZ1Q99689 392 aa12.53□□□□□ -0.4
MSRB3-201ENST00000308259 F6X3S4 739 aa12.53□□□□□ -0.4
MSRB3-201ENST00000308259 DDIT3P35638 169 aa12.53□□□□□ -0.4
MSRB3-201ENST00000308259 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
MSRB3-201ENST00000308259 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
MSRB3-201ENST00000308259 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
MSRB3-201ENST00000308259 FOXO3O43524 673 aa12.52□□□□□ -0.4
MSRB3-201ENST00000308259 CDC45O75419 566 aa12.52□□□□□ -0.4
MSRB3-201ENST00000308259 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.4
MSRB3-201ENST00000308259 ESCO1Q5FWF5 840 aa12.52□□□□□ -0.4
MSRB3-201ENST00000308259 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.4
MSRB3-201ENST00000308259 SNX21Q969T3 373 aa12.52□□□□□ -0.4
MSRB3-201ENST00000308259 TSPY26PQ9H489 355 aa12.52□□□□□ -0.4
MSRB3-201ENST00000308259 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 ARHGEF40Q8TER5 1519 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 GPS2Q13227 327 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 RAB3GAP1Q15042 981 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 MEIS3Q99687 375 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 CCDC112Q8NEF3 446 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 ABCC4O15439 1325 aa12.52□□□□□ -0.41
MSRB3-201ENST00000308259 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
MSRB3-201ENST00000308259 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
MSRB3-201ENST00000308259 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
MSRB3-201ENST00000308259 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
MSRB3-201ENST00000308259 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
MSRB3-201ENST00000308259 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
MSRB3-201ENST00000308259 RASSF4Q9H2L5 321 aa12.51□□□□□ -0.41
MSRB3-201ENST00000308259 TBX22Q9Y458 520 aa12.51□□□□□ -0.41
MSRB3-201ENST00000308259 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
MSRB3-201ENST00000308259 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
MSRB3-201ENST00000308259 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
MSRB3-201ENST00000308259 ALKQ9UM73 1620 aa12.5□□□□□ -0.41
MSRB3-201ENST00000308259 METP08581 1390 aa12.5□□□□□ -0.41
MSRB3-201ENST00000308259 NUCB2P80303 420 aa12.5□□□□□ -0.41
MSRB3-201ENST00000308259 DRC1Q96MC2 740 aa12.5□□□□□ -0.41
MSRB3-201ENST00000308259 PHF14O94880 888 aa12.49□□□□□ -0.41
MSRB3-201ENST00000308259 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms