RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 PLEKHO1Q53GL0 409 aaPredicted RBP20.63■□□□□ 0.89
TVP23B-201ENST00000307767 OTUD7AQ8TE49 926 aaPredicted RBP20.63■□□□□ 0.89
TVP23B-201ENST00000307767 KDM3BQ7LBC6 1761 aa20.63■□□□□ 0.89
TVP23B-201ENST00000307767 NCOA3Q9Y6Q9 1424 aa20.62■□□□□ 0.89
TVP23B-201ENST00000307767 MPRIPQ6WCQ1 1025 aa20.62■□□□□ 0.89
TVP23B-201ENST00000307767 RNMTO43148 476 aaKnown RBP20.61■□□□□ 0.89
TVP23B-201ENST00000307767 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
TVP23B-201ENST00000307767 AMOTQ4VCS5 1084 aa20.61■□□□□ 0.89
TVP23B-201ENST00000307767 PHAXQ9H814 394 aaKnown RBP20.61■□□□□ 0.89
TVP23B-201ENST00000307767 ERBB3P21860 1342 aa20.61■□□□□ 0.89
TVP23B-201ENST00000307767 HSPA2P54652 639 aa20.6■□□□□ 0.89
TVP23B-201ENST00000307767 NFKBIBQ15653 356 aa20.6■□□□□ 0.89
TVP23B-201ENST00000307767 HDGFL1Q5TGJ6 251 aa20.6■□□□□ 0.89
TVP23B-201ENST00000307767 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
TVP23B-201ENST00000307767 ATF3P18847 181 aa20.6■□□□□ 0.89
TVP23B-201ENST00000307767 RBM25P49756 843 aaKnown RBP20.6■□□□□ 0.89
TVP23B-201ENST00000307767 ZC3H6P61129 1189 aaKnown RBP20.6■□□□□ 0.89
TVP23B-201ENST00000307767 ANTXR1Q9H6X2 564 aa20.6■□□□□ 0.89
TVP23B-201ENST00000307767 TBC1D9Q6ZT07 1266 aa20.59■□□□□ 0.89
TVP23B-201ENST00000307767 SMARCA5O60264 1052 aaPredicted RBP20.58■□□□□ 0.89
TVP23B-201ENST00000307767 HEG1Q9ULI3 1381 aa20.58■□□□□ 0.89
TVP23B-201ENST00000307767 BECN1Q14457 450 aa20.58■□□□□ 0.88
TVP23B-201ENST00000307767 RGPD5Q99666 1765 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 HOXB7P09629 217 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 USP44Q9H0E7 712 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 PXDNLA1KZ92 1463 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 OVOS2A0A0G2JMS6 1433 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 GNAI2P04899 355 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 TTC22Q5TAA0 569 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 KIF2CQ99661 725 aa20.57■□□□□ 0.88
TVP23B-201ENST00000307767 ADAMTS7Q9UKP4 1686 aa20.56■□□□□ 0.88
TVP23B-201ENST00000307767 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
TVP23B-201ENST00000307767 BTBD11A6QL63 1104 aa20.56■□□□□ 0.88
TVP23B-201ENST00000307767 DEKP35659 375 aaKnown RBP20.56■□□□□ 0.88
TVP23B-201ENST00000307767 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
TVP23B-201ENST00000307767 CACNA1FO60840 1977 aa20.56■□□□□ 0.88
TVP23B-201ENST00000307767 COL18A1P39060 1754 aa20.56■□□□□ 0.88
TVP23B-201ENST00000307767 N4BP2Q86UW6 1770 aaPredicted RBP20.55■□□□□ 0.88
TVP23B-201ENST00000307767 PNMA6EA0A0J9YXQ4 647 aa20.55■□□□□ 0.88
TVP23B-201ENST00000307767 EIF2S2P20042 333 aaKnown RBP20.54■□□□□ 0.88
TVP23B-201ENST00000307767 TEFQ10587 303 aa20.54■□□□□ 0.88
TVP23B-201ENST00000307767 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
TVP23B-201ENST00000307767 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
TVP23B-201ENST00000307767 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
TVP23B-201ENST00000307767 GNAI3P08754 354 aa20.53■□□□□ 0.88
TVP23B-201ENST00000307767 CADPS2Q86UW7 1296 aa20.53■□□□□ 0.88
TVP23B-201ENST00000307767 SALL3Q9BXA9 1300 aa20.52■□□□□ 0.88
TVP23B-201ENST00000307767 C1orf141Q5JVX7 400 aa20.52■□□□□ 0.88
TVP23B-201ENST00000307767 APBB1O00213 710 aa20.52■□□□□ 0.87
TVP23B-201ENST00000307767 HMMRO75330 724 aa20.52■□□□□ 0.87
TVP23B-201ENST00000307767 TNS3Q68CZ2 1445 aa20.51■□□□□ 0.87
TVP23B-201ENST00000307767 CDC45O75419 566 aa20.51■□□□□ 0.87
TVP23B-201ENST00000307767 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
TVP23B-201ENST00000307767 ANXA1P04083 346 aa20.51■□□□□ 0.87
TVP23B-201ENST00000307767 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
TVP23B-201ENST00000307767 SIPA1L3O60292 1781 aaPredicted RBP20.51■□□□□ 0.87
TVP23B-201ENST00000307767 CRYBG1Q9Y4K1 1723 aa20.51■□□□□ 0.87
TVP23B-201ENST00000307767 SPATA31A3Q5VYP0 1347 aa20.51■□□□□ 0.87
TVP23B-201ENST00000307767 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
TVP23B-201ENST00000307767 PRAMEF22A3QJZ6 481 aa20.5■□□□□ 0.87
TVP23B-201ENST00000307767 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
TVP23B-201ENST00000307767 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
TVP23B-201ENST00000307767 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
TVP23B-201ENST00000307767 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
TVP23B-201ENST00000307767 EXOC6BQ9Y2D4 811 aa20.5■□□□□ 0.87
TVP23B-201ENST00000307767 ADCY9O60503 1353 aa20.49■□□□□ 0.87
TVP23B-201ENST00000307767 OSBPL3Q9H4L5 887 aa20.49■□□□□ 0.87
TVP23B-201ENST00000307767 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
TVP23B-201ENST00000307767 MEGF6O75095 1541 aa20.49■□□□□ 0.87
TVP23B-201ENST00000307767 SDSP20132 328 aa20.49■□□□□ 0.87
TVP23B-201ENST00000307767 PROSER3Q2NL68 480 aa20.48■□□□□ 0.87
TVP23B-201ENST00000307767 PI4KAP2A4QPH2 592 aa20.47■□□□□ 0.87
TVP23B-201ENST00000307767 PI4KAP1Q8N8J0 262 aa20.47■□□□□ 0.87
TVP23B-201ENST00000307767 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
TVP23B-201ENST00000307767 IBTKQ9P2D0 1353 aaPredicted RBP20.47■□□□□ 0.87
TVP23B-201ENST00000307767 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
TVP23B-201ENST00000307767 NLRP2Q9NX02 1062 aa20.47■□□□□ 0.87
TVP23B-201ENST00000307767 PDE1AP54750 535 aa20.46■□□□□ 0.87
TVP23B-201ENST00000307767 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
TVP23B-201ENST00000307767 SSH3Q8TE77 659 aa20.46■□□□□ 0.87
TVP23B-201ENST00000307767 SNX21Q969T3 373 aa20.46■□□□□ 0.87
TVP23B-201ENST00000307767 SRCIN1Q9C0H9 1055 aa20.46■□□□□ 0.87
TVP23B-201ENST00000307767 NBPF7P0C2Y1 421 aaPredicted RBP20.46■□□□□ 0.87
TVP23B-201ENST00000307767 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
TVP23B-201ENST00000307767 ABCC6O95255 1503 aa20.45■□□□□ 0.86
TVP23B-201ENST00000307767 PHKG2P15735 406 aa20.45■□□□□ 0.86
TVP23B-201ENST00000307767 CPDO75976 1380 aa20.45■□□□□ 0.86
TVP23B-201ENST00000307767 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
TVP23B-201ENST00000307767 UBTFL1P0CB47 393 aaPredicted RBP20.44■□□□□ 0.86
TVP23B-201ENST00000307767 POLA2Q14181 598 aa20.44■□□□□ 0.86
TVP23B-201ENST00000307767 DBF4Q9UBU7 674 aaPredicted RBP20.44■□□□□ 0.86
TVP23B-201ENST00000307767 CD2BP2O95400 341 aaKnown RBP20.44■□□□□ 0.86
TVP23B-201ENST00000307767 PDIA6Q15084 440 aa20.44■□□□□ 0.86
TVP23B-201ENST00000307767 RAPGEF4Q8WZA2 1011 aa20.44■□□□□ 0.86
TVP23B-201ENST00000307767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
TVP23B-201ENST00000307767 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
TVP23B-201ENST00000307767 DDIT3P35638 169 aa20.42■□□□□ 0.86
TVP23B-201ENST00000307767 LRRCC1Q9C099 1032 aa20.42■□□□□ 0.86
TVP23B-201ENST00000307767 SPRYD3Q8NCJ5 442 aa20.42■□□□□ 0.86
TVP23B-201ENST00000307767 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms