RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
SEC23A-201ENST00000307712 DTNBO60941 627 aa16.02■□□□□ 0.16
SEC23A-201ENST00000307712 KINO60870 393 aaKnown RBP16.01■□□□□ 0.15
SEC23A-201ENST00000307712 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
SEC23A-201ENST00000307712 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
SEC23A-201ENST00000307712 BLOC1S2Q6QNY1 142 aa16.01■□□□□ 0.15
SEC23A-201ENST00000307712 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
SEC23A-201ENST00000307712 TERF1P54274 439 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 FLIIQ13045 1269 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 GJB2P29033 226 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 CCDC94Q9BW85 323 aaPredicted RBP16■□□□□ 0.15
SEC23A-201ENST00000307712 A0A0G2JS52 829 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
SEC23A-201ENST00000307712 GADD45BO75293 160 aaPredicted RBP16■□□□□ 0.15
SEC23A-201ENST00000307712 TNNT1P13805 278 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 FANCAO15360 1455 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
SEC23A-201ENST00000307712 SIL1Q9H173 461 aa16■□□□□ 0.15
SEC23A-201ENST00000307712 ZNF330Q9Y3S2 320 aaPredicted RBP16■□□□□ 0.15
SEC23A-201ENST00000307712 MNS1Q8NEH6 495 aa15.99■□□□□ 0.15
SEC23A-201ENST00000307712 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
SEC23A-201ENST00000307712 POLR1AO95602 1720 aaPredicted RBP15.99■□□□□ 0.15
SEC23A-201ENST00000307712 PUS7Q96PZ0 661 aaKnown RBP15.99■□□□□ 0.15
SEC23A-201ENST00000307712 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
SEC23A-201ENST00000307712 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 SYNMO15061 1565 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 SMC2O95347 1197 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
SEC23A-201ENST00000307712 DDX11Q96FC9 970 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 TRPM1Q7Z4N2 1603 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 DNM1Q05193 864 aaKnown RBP15.98■□□□□ 0.15
SEC23A-201ENST00000307712 AACSQ86V21 672 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 ANAPC15P60006 121 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
SEC23A-201ENST00000307712 ARHGEF5Q12774 1597 aa15.97■□□□□ 0.15
SEC23A-201ENST00000307712 CHMLP26374 656 aa15.97■□□□□ 0.15
SEC23A-201ENST00000307712 CCDC186Q7Z3E2 898 aa15.97■□□□□ 0.15
SEC23A-201ENST00000307712 SIRT2Q8IXJ6 389 aa15.97■□□□□ 0.15
SEC23A-201ENST00000307712 ERICH4A6NGS2 130 aa15.96■□□□□ 0.15
SEC23A-201ENST00000307712 GLRX3O76003 335 aaKnown RBP15.96■□□□□ 0.15
SEC23A-201ENST00000307712 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
SEC23A-201ENST00000307712 INTS4Q96HW7 963 aaKnown RBP15.96■□□□□ 0.15
SEC23A-201ENST00000307712 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
SEC23A-201ENST00000307712 CCDC66A2RUB6 948 aa15.96■□□□□ 0.15
SEC23A-201ENST00000307712 CPLX1O14810 134 aa15.96■□□□□ 0.15
SEC23A-201ENST00000307712 CREBRFQ8IUR6 639 aa15.96■□□□□ 0.15
SEC23A-201ENST00000307712 NAT10Q9H0A0 1025 aaKnown RBP15.96■□□□□ 0.15
SEC23A-201ENST00000307712 TRMT1Q9NXH9 659 aaKnown RBP15.96■□□□□ 0.15
SEC23A-201ENST00000307712 ME1P48163 572 aa15.96■□□□□ 0.14
SEC23A-201ENST00000307712 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.14
SEC23A-201ENST00000307712 CLIP2Q9UDT6 1046 aa15.96■□□□□ 0.14
SEC23A-201ENST00000307712 WASLO00401 505 aaPredicted RBP15.95■□□□□ 0.14
SEC23A-201ENST00000307712 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 TEX35Q5T0J7 233 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 DNAJC2Q99543 621 aaKnown RBP15.95■□□□□ 0.14
SEC23A-201ENST00000307712 CGNQ9P2M7 1197 aaKnown RBP15.95■□□□□ 0.14
SEC23A-201ENST00000307712 CPA1P15085 419 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 G2E3Q7L622 706 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 ATP10AO60312 1499 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 ZNF518AQ6AHZ1 1483 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 KDM4AO75164 1064 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 DDX58O95786 925 aaKnown RBP15.95■□□□□ 0.14
SEC23A-201ENST00000307712 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
SEC23A-201ENST00000307712 SMAP1Q8IYB5 467 aaPredicted RBP15.95■□□□□ 0.14
SEC23A-201ENST00000307712 BRD1O95696 1058 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 F13A1P00488 732 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 ZNF165P49910 485 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 TAF7Q15545 349 aaPredicted RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 PTPN14Q15678 1187 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 RIC3Q7Z5B4 369 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 MYRIPQ8NFW9 859 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 ARGLU1Q9NWB6 273 aaPredicted RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 SYT1P21579 422 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 SCAND2PQ9GZW5 306 aaPredicted RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 MSH6P52701 1360 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 AK2P54819 239 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 NEUROD6Q96NK8 337 aa15.94■□□□□ 0.14
SEC23A-201ENST00000307712 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
SEC23A-201ENST00000307712 HIP1O00291 1037 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 KIF2CQ99661 725 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 ABCC4O15439 1325 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 PTGS1P23219 599 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 SYNE3Q6ZMZ3 975 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 SAMD9LQ8IVG5 1584 aa15.93■□□□□ 0.14
SEC23A-201ENST00000307712 ERC1Q8IUD2 1116 aa15.92■□□□□ 0.14
SEC23A-201ENST00000307712 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
SEC23A-201ENST00000307712 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
SEC23A-201ENST00000307712 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1319.6 ms