RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 GNAI2P04899 355 aa20.34■□□□□ 0.85
SYVN1-202ENST00000307289 HDGFL1Q5TGJ6 251 aa20.34■□□□□ 0.85
SYVN1-202ENST00000307289 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
SYVN1-202ENST00000307289 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
SYVN1-202ENST00000307289 USP26Q9BXU7 913 aa20.31■□□□□ 0.84
SYVN1-202ENST00000307289 LTN1O94822 1766 aa20.31■□□□□ 0.84
SYVN1-202ENST00000307289 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
SYVN1-202ENST00000307289 NCOA3Q9Y6Q9 1424 aa20.31■□□□□ 0.84
SYVN1-202ENST00000307289 PDE1AP54750 535 aa20.31■□□□□ 0.84
SYVN1-202ENST00000307289 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
SYVN1-202ENST00000307289 DDX17Q92841 729 aaKnown RBP20.3■□□□□ 0.84
SYVN1-202ENST00000307289 RGPD2P0DJD1 1756 aa20.3■□□□□ 0.84
SYVN1-202ENST00000307289 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
SYVN1-202ENST00000307289 HSP90AA1P07900 732 aaKnown RBP20.3■□□□□ 0.84
SYVN1-202ENST00000307289 TNPO1Q92973 898 aaKnown RBP20.3■□□□□ 0.84
SYVN1-202ENST00000307289 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
SYVN1-202ENST00000307289 LRRC37A3O60309 1634 aa20.29■□□□□ 0.84
SYVN1-202ENST00000307289 GCP02774 474 aa20.29■□□□□ 0.84
SYVN1-202ENST00000307289 HMMRO75330 724 aa20.29■□□□□ 0.84
SYVN1-202ENST00000307289 K7ELQ4 463 aaPredicted RBP20.28■□□□□ 0.84
SYVN1-202ENST00000307289 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
SYVN1-202ENST00000307289 ZNF530Q6P9A1 599 aaPredicted RBP20.28■□□□□ 0.84
SYVN1-202ENST00000307289 IL1RAPL2Q9NP60 686 aa20.28■□□□□ 0.84
SYVN1-202ENST00000307289 NFAT5O94916 1531 aa20.28■□□□□ 0.84
SYVN1-202ENST00000307289 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
SYVN1-202ENST00000307289 TRAK2O60296 914 aa20.26■□□□□ 0.83
SYVN1-202ENST00000307289 ATP8B2P98198 1209 aa20.26■□□□□ 0.83
SYVN1-202ENST00000307289 UNC5CLQ8IV45 518 aa20.26■□□□□ 0.83
SYVN1-202ENST00000307289 CEMIPQ8WUJ3 1361 aa20.26■□□□□ 0.83
SYVN1-202ENST00000307289 ADGRL3Q9HAR2 1447 aa20.26■□□□□ 0.83
SYVN1-202ENST00000307289 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
SYVN1-202ENST00000307289 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
SYVN1-202ENST00000307289 LRRCC1Q9C099 1032 aa20.25■□□□□ 0.83
SYVN1-202ENST00000307289 PXDNQ92626 1479 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 BTBD11A6QL63 1104 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 GNAI3P08754 354 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 SSFA2P28290 1259 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 MAP4K4O95819 1239 aaPredicted RBP20.24■□□□□ 0.83
SYVN1-202ENST00000307289 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
SYVN1-202ENST00000307289 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
SYVN1-202ENST00000307289 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
SYVN1-202ENST00000307289 ANKRD24Q8TF21 1146 aa20.23■□□□□ 0.83
SYVN1-202ENST00000307289 SALL3Q9BXA9 1300 aa20.23■□□□□ 0.83
SYVN1-202ENST00000307289 TEFQ10587 303 aa20.23■□□□□ 0.83
SYVN1-202ENST00000307289 RILPL2Q969X0 211 aa20.23■□□□□ 0.83
SYVN1-202ENST00000307289 PKP1Q13835 747 aa20.22■□□□□ 0.83
SYVN1-202ENST00000307289 PPP1R42Q7Z4L9 355 aa20.22■□□□□ 0.83
SYVN1-202ENST00000307289 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
SYVN1-202ENST00000307289 MX1P20591 662 aa20.22■□□□□ 0.83
SYVN1-202ENST00000307289 IL25Q9H293 177 aa20.22■□□□□ 0.83
SYVN1-202ENST00000307289 AK9Q5TCS8 1911 aa20.21■□□□□ 0.83
SYVN1-202ENST00000307289 RAB3GAP1Q15042 981 aa20.21■□□□□ 0.83
SYVN1-202ENST00000307289 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
SYVN1-202ENST00000307289 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
SYVN1-202ENST00000307289 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
SYVN1-202ENST00000307289 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
SYVN1-202ENST00000307289 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
SYVN1-202ENST00000307289 OSBPL3Q9H4L5 887 aa20.2■□□□□ 0.82
SYVN1-202ENST00000307289 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
SYVN1-202ENST00000307289 SRCIN1Q9C0H9 1055 aa20.19■□□□□ 0.82
SYVN1-202ENST00000307289 RNMTO43148 476 aaKnown RBP20.19■□□□□ 0.82
SYVN1-202ENST00000307289 SURF6O75683 361 aaKnown RBP20.19■□□□□ 0.82
SYVN1-202ENST00000307289 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
SYVN1-202ENST00000307289 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
SYVN1-202ENST00000307289 CHAMP1Q96JM3 812 aa20.19■□□□□ 0.82
SYVN1-202ENST00000307289 PANK2Q9BZ23 570 aa20.19■□□□□ 0.82
SYVN1-202ENST00000307289 ERC2O15083 957 aa20.18■□□□□ 0.82
SYVN1-202ENST00000307289 RABEP1Q15276 862 aa20.18■□□□□ 0.82
SYVN1-202ENST00000307289 CABLES1Q8TDN4 633 aa20.18■□□□□ 0.82
SYVN1-202ENST00000307289 PALD1Q9ULE6 856 aa20.18■□□□□ 0.82
SYVN1-202ENST00000307289 SRGAP3O43295 1099 aa20.18■□□□□ 0.82
SYVN1-202ENST00000307289 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
SYVN1-202ENST00000307289 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
SYVN1-202ENST00000307289 SOS1Q07889 1333 aaPredicted RBP20.18■□□□□ 0.82
SYVN1-202ENST00000307289 CASC1Q6TDU7 716 aa20.17■□□□□ 0.82
SYVN1-202ENST00000307289 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
SYVN1-202ENST00000307289 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
SYVN1-202ENST00000307289 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
SYVN1-202ENST00000307289 NOL8Q76FK4 1167 aaKnown RBP20.16■□□□□ 0.82
SYVN1-202ENST00000307289 ADCY9O60503 1353 aa20.16■□□□□ 0.82
SYVN1-202ENST00000307289 XRCC6P12956 609 aaKnown RBP eCLIP20.16■□□□□ 0.82
SYVN1-202ENST00000307289 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
SYVN1-202ENST00000307289 C1orf141Q5JVX7 400 aa20.16■□□□□ 0.82
SYVN1-202ENST00000307289 SSH3Q8TE77 659 aa20.16■□□□□ 0.82
SYVN1-202ENST00000307289 CHMLP26374 656 aa20.14■□□□□ 0.82
SYVN1-202ENST00000307289 ESYT1Q9BSJ8 1104 aa20.14■□□□□ 0.82
SYVN1-202ENST00000307289 REC8O95072 547 aa20.14■□□□□ 0.81
SYVN1-202ENST00000307289 AIMP1Q12904 312 aaKnown RBP20.14■□□□□ 0.81
SYVN1-202ENST00000307289 MAP3K2Q9Y2U5 619 aa20.14■□□□□ 0.81
SYVN1-202ENST00000307289 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
SYVN1-202ENST00000307289 ANO2Q9NQ90 1003 aa20.13■□□□□ 0.81
SYVN1-202ENST00000307289 CIZ1Q9ULV3 898 aaPredicted RBP20.13■□□□□ 0.81
SYVN1-202ENST00000307289 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
SYVN1-202ENST00000307289 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
SYVN1-202ENST00000307289 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
SYVN1-202ENST00000307289 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
SYVN1-202ENST00000307289 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms