RNA–Protein interactions for RNA: ENST00000306721.7

CDCA7-201, Transcript of cell division cycle associated 7, humanhuman

TSL 2 BASIC

Gene CDCA7, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-201ENST00000306721 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
CDCA7-201ENST00000306721 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
CDCA7-201ENST00000306721 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
CDCA7-201ENST00000306721 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
CDCA7-201ENST00000306721 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
CDCA7-201ENST00000306721 NHSQ6T4R5 1651 aa12.72□□□□□ -0.37
CDCA7-201ENST00000306721 EXOC5O00471 708 aa12.72□□□□□ -0.37
CDCA7-201ENST00000306721 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
CDCA7-201ENST00000306721 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
CDCA7-201ENST00000306721 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
CDCA7-201ENST00000306721 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.38
CDCA7-201ENST00000306721 ITGB4P16144 1822 aa12.7□□□□□ -0.38
CDCA7-201ENST00000306721 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
CDCA7-201ENST00000306721 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
CDCA7-201ENST00000306721 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
CDCA7-201ENST00000306721 CCDC136Q96JN2 1154 aa12.7□□□□□ -0.38
CDCA7-201ENST00000306721 DOT1LQ8TEK3 1739 aa12.69□□□□□ -0.38
CDCA7-201ENST00000306721 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
CDCA7-201ENST00000306721 TEFQ10587 303 aa12.69□□□□□ -0.38
CDCA7-201ENST00000306721 DDB1Q16531 1140 aa12.69□□□□□ -0.38
CDCA7-201ENST00000306721 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 RREB1Q92766 1687 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 MCM10Q7L590 875 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 RGPD3A6NKT7 1758 aaPredicted RBP12.68□□□□□ -0.38
CDCA7-201ENST00000306721 RGPD4Q7Z3J3 1758 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
CDCA7-201ENST00000306721 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 ARHGAP45Q92619 1136 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
CDCA7-201ENST00000306721 AAMPQ13685 434 aa12.67□□□□□ -0.38
CDCA7-201ENST00000306721 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
CDCA7-201ENST00000306721 MS4A1P11836 297 aa12.67□□□□□ -0.38
CDCA7-201ENST00000306721 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
CDCA7-201ENST00000306721 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
CDCA7-201ENST00000306721 VAMP4O75379 141 aa12.66□□□□□ -0.38
CDCA7-201ENST00000306721 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
CDCA7-201ENST00000306721 TSPYL4Q9UJ04 414 aa12.66□□□□□ -0.38
CDCA7-201ENST00000306721 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
CDCA7-201ENST00000306721 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
CDCA7-201ENST00000306721 SBF2Q86WG5 1849 aa12.65□□□□□ -0.38
CDCA7-201ENST00000306721 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
CDCA7-201ENST00000306721 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
CDCA7-201ENST00000306721 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
CDCA7-201ENST00000306721 CABP4P57796 275 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
CDCA7-201ENST00000306721 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
CDCA7-201ENST00000306721 PXDNLA1KZ92 1463 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 C5P01031 1676 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
CDCA7-201ENST00000306721 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
CDCA7-201ENST00000306721 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
CDCA7-201ENST00000306721 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
CDCA7-201ENST00000306721 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
CDCA7-201ENST00000306721 LY75O60449 1722 aa12.62□□□□□ -0.39
CDCA7-201ENST00000306721 PTPRCP08575 1304 aa12.62□□□□□ -0.39
CDCA7-201ENST00000306721 RGL2O15211 777 aa12.62□□□□□ -0.39
CDCA7-201ENST00000306721 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
CDCA7-201ENST00000306721 RGS12O14924 1447 aa12.62□□□□□ -0.39
CDCA7-201ENST00000306721 TJP1Q07157 1748 aa12.61□□□□□ -0.39
CDCA7-201ENST00000306721 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
CDCA7-201ENST00000306721 PLIN1O60240 522 aa12.61□□□□□ -0.39
CDCA7-201ENST00000306721 CCDC30Q5VVM6 783 aa12.61□□□□□ -0.39
CDCA7-201ENST00000306721 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
CDCA7-201ENST00000306721 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
CDCA7-201ENST00000306721 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
CDCA7-201ENST00000306721 BRWD3Q6RI45 1802 aa12.61□□□□□ -0.39
CDCA7-201ENST00000306721 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
CDCA7-201ENST00000306721 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
CDCA7-201ENST00000306721 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
CDCA7-201ENST00000306721 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
CDCA7-201ENST00000306721 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
CDCA7-201ENST00000306721 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
CDCA7-201ENST00000306721 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
CDCA7-201ENST00000306721 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
CDCA7-201ENST00000306721 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
CDCA7-201ENST00000306721 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.39
CDCA7-201ENST00000306721 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.39
CDCA7-201ENST00000306721 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
CDCA7-201ENST00000306721 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
CDCA7-201ENST00000306721 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
CDCA7-201ENST00000306721 BTAF1O14981 1849 aa12.58□□□□□ -0.4
CDCA7-201ENST00000306721 PIGBQ92521 554 aa12.58□□□□□ -0.4
CDCA7-201ENST00000306721 MSH5O43196 834 aa12.57□□□□□ -0.4
CDCA7-201ENST00000306721 RXRBP28702 533 aa12.57□□□□□ -0.4
CDCA7-201ENST00000306721 API5Q9BZZ5 524 aaKnown RBP12.57□□□□□ -0.4
CDCA7-201ENST00000306721 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
CDCA7-201ENST00000306721 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
CDCA7-201ENST00000306721 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
CDCA7-201ENST00000306721 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
CDCA7-201ENST00000306721 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
CDCA7-201ENST00000306721 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
CDCA7-201ENST00000306721 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
CDCA7-201ENST00000306721 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
CDCA7-201ENST00000306721 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
CDCA7-201ENST00000306721 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms