RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
PCDHGC4-201ENST00000306593 H3BQV1 296 aa13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 GNL2Q13823 731 aaKnown RBP13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 EYA1Q99502 592 aa13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 CABP4P57796 275 aa13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 MEIS3Q99687 375 aa13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 ABCC4O15439 1325 aa13.12□□□□□ -0.31
PCDHGC4-201ENST00000306593 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 PDCP20941 246 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 LETM1O95202 739 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 HOXC9P31274 260 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 ANKRD1Q15327 319 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
PCDHGC4-201ENST00000306593 AKAP4Q5JQC9 854 aa13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 FOXO3O43524 673 aa13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 RBM25P49756 843 aaKnown RBP13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 AGLP35573 1532 aa13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
PCDHGC4-201ENST00000306593 SEC24BO95487 1268 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 KCNA6P17658 529 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 IP6K1Q92551 441 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 AACSQ86V21 672 aa13.09□□□□□ -0.31
PCDHGC4-201ENST00000306593 HOXB7P09629 217 aa13.08□□□□□ -0.31
PCDHGC4-201ENST00000306593 TSPOAP1O95153 1857 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 SDSP20132 328 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 PDE1AP54750 535 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 TPM4P67936 248 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 PLEKHM2Q8IWE5 1019 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
PCDHGC4-201ENST00000306593 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 LTKP29376 864 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 CCDC173Q0VFZ6 552 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 PTPRMP28827 1452 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 PPLO60437 1756 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 ANAPC15P60006 121 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 USP6P35125 1406 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 MSH6P52701 1360 aa13.07□□□□□ -0.32
PCDHGC4-201ENST00000306593 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 KRT32Q14532 448 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
PCDHGC4-201ENST00000306593 MYL6BP14649 208 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 KIF6Q6ZMV9 814 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 ROBO2Q9HCK4 1378 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 ARHGEF40Q8TER5 1519 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 MROH2AA6NES4 1674 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
PCDHGC4-201ENST00000306593 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 USP32Q8NFA0 1604 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 TRDNQ13061 729 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 KRT24Q2M2I5 525 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 FRMPD1Q5SYB0 1578 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 MAP3K2Q9Y2U5 619 aa13.04□□□□□ -0.32
PCDHGC4-201ENST00000306593 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 MAP4K4O95819 1239 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
PCDHGC4-201ENST00000306593 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms