RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CDK5RAP3Q96JB5 506 aa9.9□□□□□ -0.82
PCDHB1-201ENST00000306549 BICD2Q8TD16 824 aa9.9□□□□□ -0.82
PCDHB1-201ENST00000306549 POLD1P28340 1107 aa9.9□□□□□ -0.83
PCDHB1-201ENST00000306549 TTC39AQ5SRH9 613 aa9.9□□□□□ -0.83
PCDHB1-201ENST00000306549 NECTIN2Q92692 538 aa9.9□□□□□ -0.83
PCDHB1-201ENST00000306549 RRS1Q15050 365 aaKnown RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 TXLNAP40222 546 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 ZCRB1Q8TBF4 217 aaKnown RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 IFIT1P09914 478 aaKnown RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 IL2RBP14784 551 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 RFC4P35249 363 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 NAT10Q9H0A0 1025 aaKnown RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 CHMP5Q9NZZ3 219 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 CCDC73Q6ZRK6 1079 aa9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 ZGPATQ8N5A5 531 aaKnown RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 FOXD4L4Q8WXT5 416 aaPredicted RBP9.89□□□□□ -0.83
PCDHB1-201ENST00000306549 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 COL17A1Q9UMD9 1497 aaPredicted RBP9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 CLTCQ00610 1675 aaKnown RBP9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 SNRPA1P09661 255 aaKnown RBP9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 FOXD4L1Q9NU39 408 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 PCDH11XQ9BZA7 1347 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 PCDH11YQ9BZA8 1340 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 SPTY2D1Q68D10 685 aaPredicted RBP9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 ARGLU1Q9NWB6 273 aaPredicted RBP9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
PCDHB1-201ENST00000306549 GLI2P10070 1586 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 KRT32Q14532 448 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 LRRCC1Q9C099 1032 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 DDX49Q9Y6V7 483 aaKnown RBP9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 CACNA1FO60840 1977 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 FYB1O15117 783 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 HSP90B2PQ58FF3 399 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 PLEKHG1Q9ULL1 1385 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 TRAF1Q13077 416 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 IFIT5Q13325 482 aaKnown RBP9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 CDKL5O76039 1030 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 FLAD1Q8NFF5 587 aa9.87□□□□□ -0.83
PCDHB1-201ENST00000306549 NOM1Q5C9Z4 860 aaKnown RBP9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 CCDC97Q96F63 343 aaPredicted RBP9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 ERCC4Q92889 916 aaPredicted RBP9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 CAMSAP1Q5T5Y3 1602 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 ERLIN2O94905 339 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 LUC7LQ9NQ29 371 aaKnown RBP9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 KRT18P05783 430 aaKnown RBP9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 ITSN1Q15811 1721 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 NPC1L1Q9UHC9 1359 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 PLEKHH1Q9ULM0 1364 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 UNC13BO14795 1591 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 C8orf37Q96NL8 207 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 FSD1Q9BTV5 496 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 PZPP20742 1482 aa9.86□□□□□ -0.83
PCDHB1-201ENST00000306549 MYL6BP14649 208 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 DEKP35659 375 aaKnown RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 DDX46Q7L014 1031 aaKnown RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 TXLNBQ8N3L3 684 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 MAGEC2Q9UBF1 373 aaPredicted RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 CDC45O75419 566 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 SLAIN2Q9P270 581 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 MYOM2P54296 1465 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 MPHOSPH10O00566 681 aaKnown RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 MYO1BO43795 1136 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 NEBLO76041 1014 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 NCKAP5LQ9HCH0 1330 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 SBNO2Q9Y2G9 1366 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 LDHCP07864 332 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 AK9Q5TCS8 1911 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 TTF1Q15361 905 aaPredicted RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 CAGE1Q8TC20 777 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 ARHGAP31Q2M1Z3 1444 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 PDCL3Q9H2J4 239 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 NEFHP12036 1026 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 SLC5A1P13866 664 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 EZRP15311 586 aaKnown RBP9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 TRIM22Q8IYM9 498 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 SMC3Q9UQE7 1217 aa9.85□□□□□ -0.83
PCDHB1-201ENST00000306549 PLIN1O60240 522 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 CERS3Q8IU89 383 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 MAP7D2Q96T17 732 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 NPHP4O75161 1426 aaPredicted RBP9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 NUCB2P80303 420 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 SMARCE1Q969G3 411 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms