RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MAP7D1Q3KQU3 841 aa15.54■□□□□ 0.08
TRIM56-201ENST00000306085 TNIP1Q15025 636 aa15.53■□□□□ 0.08
TRIM56-201ENST00000306085 TRMT1Q9NXH9 659 aaKnown RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 CEP131Q9UPN4 1083 aa15.53■□□□□ 0.08
TRIM56-201ENST00000306085 K7ELQ4 463 aaPredicted RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 GTPBP4Q9BZE4 634 aaKnown RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 FKBP4Q02790 459 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
TRIM56-201ENST00000306085 SEC63Q9UGP8 760 aaKnown RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 IQCGQ9H095 443 aaKnown RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 CLIP2Q9UDT6 1046 aa15.53■□□□□ 0.08
TRIM56-201ENST00000306085 CPSF2Q9P2I0 782 aaKnown RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 USO1O60763 962 aaKnown RBP15.53■□□□□ 0.08
TRIM56-201ENST00000306085 USP47Q96K76 1375 aa15.53■□□□□ 0.08
TRIM56-201ENST00000306085 NUTM2GQ5VZR2 741 aa15.52■□□□□ 0.08
TRIM56-201ENST00000306085 OTUD6BQ8N6M0 293 aa15.52■□□□□ 0.08
TRIM56-201ENST00000306085 NAA25Q14CX7 972 aa15.52■□□□□ 0.08
TRIM56-201ENST00000306085 HSF2BPO75031 334 aa15.52■□□□□ 0.07
TRIM56-201ENST00000306085 WDR78Q5VTH9 848 aa15.52■□□□□ 0.07
TRIM56-201ENST00000306085 SPTY2D1Q68D10 685 aaPredicted RBP15.52■□□□□ 0.07
TRIM56-201ENST00000306085 NLRP2Q9NX02 1062 aa15.52■□□□□ 0.07
TRIM56-201ENST00000306085 NSRP1Q9H0G5 558 aaKnown RBP15.51■□□□□ 0.07
TRIM56-201ENST00000306085 KIF4AO95239 1232 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 FERMT1Q9BQL6 677 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 ZSCAN30Q86W11 494 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 JADE2Q9NQC1 790 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 RGS22Q8NE09 1264 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 SH3BP5O60239 455 aa15.51■□□□□ 0.07
TRIM56-201ENST00000306085 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
TRIM56-201ENST00000306085 PUF60Q9UHX1 559 aaKnown RBP15.51■□□□□ 0.07
TRIM56-201ENST00000306085 ZBTB16Q05516 673 aa15.5■□□□□ 0.07
TRIM56-201ENST00000306085 NOP2P46087 812 aaKnown RBP15.5■□□□□ 0.07
TRIM56-201ENST00000306085 CEP120Q8N960 986 aa15.5■□□□□ 0.07
TRIM56-201ENST00000306085 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
TRIM56-201ENST00000306085 SMC6Q96SB8 1091 aa15.5■□□□□ 0.07
TRIM56-201ENST00000306085 CCDC83Q8IWF9 413 aa15.5■□□□□ 0.07
TRIM56-201ENST00000306085 PDRG1Q9NUG6 133 aa15.5■□□□□ 0.07
TRIM56-201ENST00000306085 FGFR1OPO95684 399 aaKnown RBP15.49■□□□□ 0.07
TRIM56-201ENST00000306085 MKRN1Q9UHC7 482 aaKnown RBP15.49■□□□□ 0.07
TRIM56-201ENST00000306085 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
TRIM56-201ENST00000306085 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
TRIM56-201ENST00000306085 SMC1BQ8NDV3 1235 aa15.49■□□□□ 0.07
TRIM56-201ENST00000306085 GNAI3P08754 354 aa15.49■□□□□ 0.07
TRIM56-201ENST00000306085 WASF1Q92558 559 aa15.49■□□□□ 0.07
TRIM56-201ENST00000306085 RSPH14Q9UHP6 348 aa15.49■□□□□ 0.07
TRIM56-201ENST00000306085 ERCC3P19447 782 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
TRIM56-201ENST00000306085 GNAI2P04899 355 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 CCDC155Q8N6L0 562 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 HNRNPMP52272 730 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRIM56-201ENST00000306085 ZNF354CQ86Y25 554 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 EPSTI1Q96J88 318 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 ZFYP08048 801 aaPredicted RBP15.48■□□□□ 0.07
TRIM56-201ENST00000306085 SEPT14Q6ZU15 432 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 JAKMIP1Q96N16 626 aaKnown RBP15.48■□□□□ 0.07
TRIM56-201ENST00000306085 MPHOSPH8Q99549 860 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 ACTN2P35609 894 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 CCDC63Q8NA47 563 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
TRIM56-201ENST00000306085 RFC1P35251 1148 aaPredicted RBP15.47■□□□□ 0.07
TRIM56-201ENST00000306085 BLOC1S2Q6QNY1 142 aa15.47■□□□□ 0.07
TRIM56-201ENST00000306085 AAMPQ13685 434 aa15.47■□□□□ 0.07
TRIM56-201ENST00000306085 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
TRIM56-201ENST00000306085 YEATS4O95619 227 aa15.47■□□□□ 0.07
TRIM56-201ENST00000306085 PDE1CQ14123 709 aaPredicted RBP15.47■□□□□ 0.07
TRIM56-201ENST00000306085 SATB1Q01826 763 aa15.47■□□□□ 0.07
TRIM56-201ENST00000306085 DYNC1I1O14576 645 aa15.47■□□□□ 0.07
TRIM56-201ENST00000306085 NDC80O14777 642 aa15.46■□□□□ 0.07
TRIM56-201ENST00000306085 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.07
TRIM56-201ENST00000306085 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
TRIM56-201ENST00000306085 GBP7Q8N8V2 638 aaPredicted RBP15.46■□□□□ 0.07
TRIM56-201ENST00000306085 CA8P35219 290 aa15.46■□□□□ 0.07
TRIM56-201ENST00000306085 SLU7O95391 586 aaKnown RBP15.46■□□□□ 0.07
TRIM56-201ENST00000306085 ZSWIM4Q9H7M6 989 aa15.46■□□□□ 0.07
TRIM56-201ENST00000306085 CEP135Q66GS9 1140 aa15.45■□□□□ 0.06
TRIM56-201ENST00000306085 CKAP4Q07065 602 aaKnown RBP15.45■□□□□ 0.06
TRIM56-201ENST00000306085 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
TRIM56-201ENST00000306085 SWAP70Q9UH65 585 aa15.45■□□□□ 0.06
TRIM56-201ENST00000306085 TERF1P54274 439 aa15.45■□□□□ 0.06
TRIM56-201ENST00000306085 EFCAB2Q5VUJ9 269 aa15.45■□□□□ 0.06
TRIM56-201ENST00000306085 CCDC144CPQ8IYA2 1237 aa15.45■□□□□ 0.06
TRIM56-201ENST00000306085 SYNCQ9H7C4 482 aa15.45■□□□□ 0.06
TRIM56-201ENST00000306085 AACSQ86V21 672 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 PPP1R9BQ96SB3 815 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 FAM114A2Q9NRY5 505 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 CCDC121Q6ZUS5 278 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 SARNPP82979 210 aaKnown RBP15.44■□□□□ 0.06
TRIM56-201ENST00000306085 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 KIF5AQ12840 1032 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 MYO1BO43795 1136 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 MICALL1Q8N3F8 863 aa15.44■□□□□ 0.06
TRIM56-201ENST00000306085 ANO10Q9NW15 660 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 KIAA0753Q2KHM9 967 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
TRIM56-201ENST00000306085 IVLP07476 585 aa15.43■□□□□ 0.06
TRIM56-201ENST00000306085 TTC31Q49AM3 519 aaPredicted RBP15.43■□□□□ 0.06
TRIM56-201ENST00000306085 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms