RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
SCG2-201ENST00000305409 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
SCG2-201ENST00000305409 SLIT3O75094 1523 aa14.26□□□□□ -0.13
SCG2-201ENST00000305409 OTUD7AQ8TE49 926 aaPredicted RBP14.26□□□□□ -0.13
SCG2-201ENST00000305409 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
SCG2-201ENST00000305409 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
SCG2-201ENST00000305409 AMOTQ4VCS5 1084 aa14.26□□□□□ -0.13
SCG2-201ENST00000305409 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
SCG2-201ENST00000305409 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
SCG2-201ENST00000305409 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
SCG2-201ENST00000305409 RAPGEF4Q8WZA2 1011 aa14.25□□□□□ -0.13
SCG2-201ENST00000305409 SPATA31A3Q5VYP0 1347 aa14.24□□□□□ -0.13
SCG2-201ENST00000305409 DCTPP1Q9H773 170 aa14.24□□□□□ -0.13
SCG2-201ENST00000305409 SLAIN2Q9P270 581 aa14.24□□□□□ -0.13
SCG2-201ENST00000305409 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
SCG2-201ENST00000305409 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
SCG2-201ENST00000305409 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
SCG2-201ENST00000305409 UPF2Q9HAU5 1272 aaKnown RBP14.23□□□□□ -0.13
SCG2-201ENST00000305409 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
SCG2-201ENST00000305409 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
SCG2-201ENST00000305409 RPAP2Q8IXW5 612 aaPredicted RBP14.22□□□□□ -0.13
SCG2-201ENST00000305409 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
SCG2-201ENST00000305409 LRRC37A3O60309 1634 aa14.22□□□□□ -0.13
SCG2-201ENST00000305409 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
SCG2-201ENST00000305409 TBC1D32Q96NH3 1257 aa14.21□□□□□ -0.13
SCG2-201ENST00000305409 TNS3Q68CZ2 1445 aa14.21□□□□□ -0.14
SCG2-201ENST00000305409 PNMA6EA0A0J9YXQ4 647 aa14.21□□□□□ -0.14
SCG2-201ENST00000305409 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.14
SCG2-201ENST00000305409 TATP17735 454 aaPredicted RBP14.21□□□□□ -0.14
SCG2-201ENST00000305409 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.14
SCG2-201ENST00000305409 BABAM1Q9NWV8 329 aa14.21□□□□□ -0.14
SCG2-201ENST00000305409 LRRFIP2Q9Y608 721 aaKnown RBP14.21□□□□□ -0.14
SCG2-201ENST00000305409 GNAI2P04899 355 aa14.2□□□□□ -0.14
SCG2-201ENST00000305409 PLEKHM2Q8IWE5 1019 aa14.2□□□□□ -0.14
SCG2-201ENST00000305409 DCCP43146 1447 aa14.2□□□□□ -0.14
SCG2-201ENST00000305409 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
SCG2-201ENST00000305409 PIP4K2AP48426 406 aaPredicted RBP14.2□□□□□ -0.14
SCG2-201ENST00000305409 TSHZ3Q63HK5 1081 aa14.2□□□□□ -0.14
SCG2-201ENST00000305409 PRDM11Q9NQV5 511 aa14.2□□□□□ -0.14
SCG2-201ENST00000305409 GSPT1P15170 499 aaKnown RBP14.19□□□□□ -0.14
SCG2-201ENST00000305409 SPRYD3Q8NCJ5 442 aa14.19□□□□□ -0.14
SCG2-201ENST00000305409 C22orf23Q9BZE7 217 aa14.19□□□□□ -0.14
SCG2-201ENST00000305409 USP44Q9H0E7 712 aa14.19□□□□□ -0.14
SCG2-201ENST00000305409 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
SCG2-201ENST00000305409 GIGYF1O75420 1035 aaPredicted RBP14.19□□□□□ -0.14
SCG2-201ENST00000305409 AIMP1Q12904 312 aaKnown RBP14.19□□□□□ -0.14
SCG2-201ENST00000305409 MEGF6O75095 1541 aa14.18□□□□□ -0.14
SCG2-201ENST00000305409 CYP27B1O15528 508 aa14.18□□□□□ -0.14
SCG2-201ENST00000305409 PHKG2P15735 406 aa14.18□□□□□ -0.14
SCG2-201ENST00000305409 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
SCG2-201ENST00000305409 BMP2KLQ5H9B9 411 aa14.18□□□□□ -0.14
SCG2-201ENST00000305409 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
SCG2-201ENST00000305409 NCAPD2Q15021 1401 aa14.17□□□□□ -0.14
SCG2-201ENST00000305409 NCOA3Q9Y6Q9 1424 aa14.17□□□□□ -0.14
SCG2-201ENST00000305409 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
SCG2-201ENST00000305409 TBC1D9Q6ZT07 1266 aa14.17□□□□□ -0.14
SCG2-201ENST00000305409 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
SCG2-201ENST00000305409 PHRF1Q9P1Y6 1649 aaKnown RBP14.16□□□□□ -0.14
SCG2-201ENST00000305409 UBTFL1P0CB47 393 aaPredicted RBP14.16□□□□□ -0.14
SCG2-201ENST00000305409 SLKQ9H2G2 1235 aaPredicted RBP14.16□□□□□ -0.14
SCG2-201ENST00000305409 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
SCG2-201ENST00000305409 MYL6BP14649 208 aa14.16□□□□□ -0.14
SCG2-201ENST00000305409 DNAAF4Q8WXU2 420 aa14.16□□□□□ -0.14
SCG2-201ENST00000305409 SRCIN1Q9C0H9 1055 aa14.16□□□□□ -0.14
SCG2-201ENST00000305409 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
SCG2-201ENST00000305409 HMMRO75330 724 aa14.15□□□□□ -0.14
SCG2-201ENST00000305409 GNAI3P08754 354 aa14.15□□□□□ -0.14
SCG2-201ENST00000305409 ZNF790Q6PG37 636 aa14.15□□□□□ -0.14
SCG2-201ENST00000305409 SLC52A2Q9HAB3 445 aa14.15□□□□□ -0.14
SCG2-201ENST00000305409 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
SCG2-201ENST00000305409 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
SCG2-201ENST00000305409 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
SCG2-201ENST00000305409 CWF19L2Q2TBE0 894 aaKnown RBP14.14□□□□□ -0.15
SCG2-201ENST00000305409 ZNF496Q96IT1 587 aaPredicted RBP14.14□□□□□ -0.15
SCG2-201ENST00000305409 DBF4Q9UBU7 674 aaPredicted RBP14.14□□□□□ -0.15
SCG2-201ENST00000305409 VIRMAQ69YN4 1812 aaKnown RBP14.14□□□□□ -0.15
SCG2-201ENST00000305409 XIRP1Q702N8 1843 aaKnown RBP14.14□□□□□ -0.15
SCG2-201ENST00000305409 BEND3Q5T5X7 828 aa14.14□□□□□ -0.15
SCG2-201ENST00000305409 TBC1D2Q9BYX2 928 aa14.14□□□□□ -0.15
SCG2-201ENST00000305409 FAM208AQ9UK61 1670 aaKnown RBP14.13□□□□□ -0.15
SCG2-201ENST00000305409 SOS1Q07889 1333 aaPredicted RBP14.13□□□□□ -0.15
SCG2-201ENST00000305409 SOS2Q07890 1332 aaPredicted RBP14.13□□□□□ -0.15
SCG2-201ENST00000305409 ATP8B2P98198 1209 aa14.13□□□□□ -0.15
SCG2-201ENST00000305409 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
SCG2-201ENST00000305409 ADCY9O60503 1353 aa14.13□□□□□ -0.15
SCG2-201ENST00000305409 HOXB7P09629 217 aa14.13□□□□□ -0.15
SCG2-201ENST00000305409 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
SCG2-201ENST00000305409 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
SCG2-201ENST00000305409 LARP1Q6PKG0 1096 aaKnown RBP14.12□□□□□ -0.15
SCG2-201ENST00000305409 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
SCG2-201ENST00000305409 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
SCG2-201ENST00000305409 LMO7Q8WWI1 1683 aa14.12□□□□□ -0.15
SCG2-201ENST00000305409 SDSP20132 328 aa14.11□□□□□ -0.15
SCG2-201ENST00000305409 CABP4P57796 275 aa14.11□□□□□ -0.15
SCG2-201ENST00000305409 EVA1CP58658 441 aa14.11□□□□□ -0.15
SCG2-201ENST00000305409 BECN1Q14457 450 aa14.11□□□□□ -0.15
SCG2-201ENST00000305409 PDIA6Q15084 440 aa14.11□□□□□ -0.15
SCG2-201ENST00000305409 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
SCG2-201ENST00000305409 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
SCG2-201ENST00000305409 JARID2Q92833 1246 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms