RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 TDO2P48775 406 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 CEBPZQ03701 1054 aaKnown RBP9.35□□□□□ -0.91
PCNX1-201ENST00000304743 TSPYL4Q9UJ04 414 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 ZSCAN31Q96LW9 406 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-201ENST00000304743 CRCPO75575 148 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 GOLGA1Q92805 767 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 NLRP5P59047 1200 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 TNNT1P13805 278 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 ITM2BQ9Y287 266 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 NUCB1Q02818 461 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 PLVAPQ9BX97 442 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 LRP2BPQ9P2M1 347 aa9.35□□□□□ -0.91
PCNX1-201ENST00000304743 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-201ENST00000304743 CDKL5O76039 1030 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-201ENST00000304743 FKBP15Q5T1M5 1219 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 SYCP3Q8IZU3 236 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 SMTNL1A8MU46 457 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 STK25O00506 426 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 MICALCLQ6ZW33 695 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 ZPR1O75312 459 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 ARHGAP29Q52LW3 1261 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 UBTFL1P0CB47 393 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-201ENST00000304743 ZNF569Q5MCW4 686 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 FAM43AQ8N2R8 423 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 B4DLN1 442 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 MRPL12P52815 198 aaKnown RBP9.34□□□□□ -0.91
PCNX1-201ENST00000304743 PPP4R4Q6NUP7 873 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 PHLDB2Q86SQ0 1253 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 MAP9Q49MG5 647 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 NACA2Q9H009 215 aa9.34□□□□□ -0.91
PCNX1-201ENST00000304743 ZKSCAN2Q63HK3 967 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 SLF2Q8IX21 1173 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
PCNX1-201ENST00000304743 HAUS2Q9NVX0 235 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 IGHMBP2P38935 993 aaKnown RBP9.33□□□□□ -0.92
PCNX1-201ENST00000304743 SPOUT1Q5T280 376 aaKnown RBP9.33□□□□□ -0.92
PCNX1-201ENST00000304743 USP37Q86T82 979 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 ME1P48163 572 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 RAI14Q9P0K7 980 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 CFAP36Q96G28 342 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 CCDC77Q9BR77 488 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 ZNF652Q9Y2D9 606 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.33□□□□□ -0.92
PCNX1-201ENST00000304743 SSFA2P28290 1259 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 TMEM266Q2M3C6 531 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 CCDC110Q8TBZ0 833 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 API5Q9BZZ5 524 aaKnown RBP9.33□□□□□ -0.92
PCNX1-201ENST00000304743 AFG3L2Q9Y4W6 797 aa9.33□□□□□ -0.92
PCNX1-201ENST00000304743 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 CLIP2Q9UDT6 1046 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 MCM3P25205 808 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 CDR2Q01850 454 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 GBP7Q8N8V2 638 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 FAM169AQ9Y6X4 670 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 RFC1P35251 1148 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 GABPAQ06546 454 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 GABPB2Q8TAK5 448 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 ARID5AQ03989 594 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 NAA15Q9BXJ9 866 aaKnown RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 BAG4O95429 457 aaKnown RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 PRPF4BQ13523 1007 aaKnown RBP9.32□□□□□ -0.92
PCNX1-201ENST00000304743 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 NUP62CLQ9H1M0 184 aa9.32□□□□□ -0.92
PCNX1-201ENST00000304743 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 TBC1D31Q96DN5 1066 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 CAVIN4Q5BKX8 364 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 GTF3C6Q969F1 213 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 CABP5Q9NP86 173 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 WASF1Q92558 559 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 RBM28Q9NW13 759 aaKnown RBP9.31□□□□□ -0.92
PCNX1-201ENST00000304743 TOM1L2Q6ZVM7 507 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 RBM27Q9P2N5 1060 aaKnown RBP9.31□□□□□ -0.92
PCNX1-201ENST00000304743 SWAP70Q9UH65 585 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 PHACTR2O75167 634 aa9.31□□□□□ -0.92
PCNX1-201ENST00000304743 BRDTQ58F21 947 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-201ENST00000304743 MCM10Q7L590 875 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 USO1O60763 962 aaKnown RBP9.3□□□□□ -0.92
PCNX1-201ENST00000304743 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-201ENST00000304743 ACBD5Q5T8D3 534 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-201ENST00000304743 ABCF2Q9UG63 623 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 GBP3Q9H0R5 595 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 HLTFQ14527 1009 aaKnown RBP eCLIP9.3□□□□□ -0.924e-6■■■■□ 21.7
PCNX1-201ENST00000304743 PRR16Q569H4 304 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 UBE2Q2Q8WVN8 375 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 ESYT2A0FGR8 921 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 STMN1P16949 149 aa9.3□□□□□ -0.92
PCNX1-201ENST00000304743 DDX54Q8TDD1 881 aaKnown RBP9.3□□□□□ -0.92
PCNX1-201ENST00000304743 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms