RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 ARXQ96QS3 562 aa21.45■■□□□ 1.03
SRGAP2C-201ENST00000304465 ATG3Q9NT62 314 aa21.45■■□□□ 1.02
SRGAP2C-201ENST00000304465 ATP6V1AP38606 617 aa21.44■■□□□ 1.02
SRGAP2C-201ENST00000304465 AKAP4Q5JQC9 854 aa21.44■■□□□ 1.02
SRGAP2C-201ENST00000304465 SGIP1Q9BQI5 828 aa21.44■■□□□ 1.02
SRGAP2C-201ENST00000304465 COL23A1Q86Y22 540 aaPredicted RBP21.43■■□□□ 1.02
SRGAP2C-201ENST00000304465 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
SRGAP2C-201ENST00000304465 MYBBP1AQ9BQG0 1328 aaKnown RBP21.43■■□□□ 1.02
SRGAP2C-201ENST00000304465 C5P01031 1676 aa21.42■■□□□ 1.02
SRGAP2C-201ENST00000304465 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
SRGAP2C-201ENST00000304465 FHDC1Q9C0D6 1143 aaPredicted RBP21.42■■□□□ 1.02
SRGAP2C-201ENST00000304465 KDM6AO15550 1401 aaPredicted RBP21.42■■□□□ 1.02
SRGAP2C-201ENST00000304465 NUDCQ9Y266 331 aa21.4■■□□□ 1.02
SRGAP2C-201ENST00000304465 PHF14O94880 888 aa21.39■■□□□ 1.02
SRGAP2C-201ENST00000304465 KLHL34Q8N239 644 aa21.39■■□□□ 1.02
SRGAP2C-201ENST00000304465 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.02
SRGAP2C-201ENST00000304465 SYT17Q9BSW7 474 aa21.39■■□□□ 1.02
SRGAP2C-201ENST00000304465 LINC00116Q8NCU8 138 aa21.39■■□□□ 1.01
SRGAP2C-201ENST00000304465 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
SRGAP2C-201ENST00000304465 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
SRGAP2C-201ENST00000304465 TUBGCP6Q96RT7 1819 aa21.37■■□□□ 1.01
SRGAP2C-201ENST00000304465 COL3A1P02461 1466 aaPredicted RBP21.37■■□□□ 1.01
SRGAP2C-201ENST00000304465 GNPATO15228 680 aa21.37■■□□□ 1.01
SRGAP2C-201ENST00000304465 ITPK1Q13572 414 aa21.37■■□□□ 1.01
SRGAP2C-201ENST00000304465 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
SRGAP2C-201ENST00000304465 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
SRGAP2C-201ENST00000304465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.36■■□□□ 1.01
SRGAP2C-201ENST00000304465 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
SRGAP2C-201ENST00000304465 SSFA2P28290 1259 aa21.36■■□□□ 1.01
SRGAP2C-201ENST00000304465 MSL1Q68DK7 614 aa21.36■■□□□ 1.01
SRGAP2C-201ENST00000304465 RNMTO43148 476 aaKnown RBP21.34■■□□□ 1.01
SRGAP2C-201ENST00000304465 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
SRGAP2C-201ENST00000304465 SLC52A2Q9HAB3 445 aa21.34■■□□□ 1.01
SRGAP2C-201ENST00000304465 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
SRGAP2C-201ENST00000304465 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
SRGAP2C-201ENST00000304465 U2AF1L5P0DN76 240 aaPredicted RBP21.32■■□□□ 1
SRGAP2C-201ENST00000304465 U2AF1Q01081 240 aaKnown RBP eCLIP21.32■■□□□ 1
SRGAP2C-201ENST00000304465 RTCBQ9Y3I0 505 aaKnown RBP21.32■■□□□ 1
SRGAP2C-201ENST00000304465 MAP3K5Q99683 1374 aa21.32■■□□□ 1
SRGAP2C-201ENST00000304465 SLC4A9Q96Q91 983 aa21.31■■□□□ 1
SRGAP2C-201ENST00000304465 PRKAR2BP31323 418 aa21.3■■□□□ 1
SRGAP2C-201ENST00000304465 RC3H1Q5TC82 1133 aaKnown RBP21.3■■□□□ 1
SRGAP2C-201ENST00000304465 SMIM5Q71RC9 77 aa21.3■■□□□ 1
SRGAP2C-201ENST00000304465 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
SRGAP2C-201ENST00000304465 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
SRGAP2C-201ENST00000304465 TRAPPC3LQ5T215 181 aa21.29■■□□□ 1
SRGAP2C-201ENST00000304465 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
SRGAP2C-201ENST00000304465 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
SRGAP2C-201ENST00000304465 TEFQ10587 303 aa21.28■■□□□ 1
SRGAP2C-201ENST00000304465 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
SRGAP2C-201ENST00000304465 RSPH6AQ9H0K4 717 aa21.27■■□□□ 1
SRGAP2C-201ENST00000304465 UBR3Q6ZT12 1888 aa21.27■□□□□ 0.99
SRGAP2C-201ENST00000304465 ADRA2BP18089 450 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 ZNF831Q5JPB2 1677 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 FCHSD2O94868 740 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 NEFMP07197 916 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 YY1P25490 414 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 SLC39A6Q13433 755 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 GPR162Q16538 588 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
SRGAP2C-201ENST00000304465 MRC1P22897 1456 aa21.25■□□□□ 0.99
SRGAP2C-201ENST00000304465 RFC4P35249 363 aa21.25■□□□□ 0.99
SRGAP2C-201ENST00000304465 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
SRGAP2C-201ENST00000304465 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
SRGAP2C-201ENST00000304465 PHACTR3Q96KR7 559 aa21.24■□□□□ 0.99
SRGAP2C-201ENST00000304465 RTF1Q92541 710 aaKnown RBP21.23■□□□□ 0.99
SRGAP2C-201ENST00000304465 IL17REQ8NFR9 667 aa21.22■□□□□ 0.99
SRGAP2C-201ENST00000304465 NLGN2Q8NFZ4 835 aa21.22■□□□□ 0.99
SRGAP2C-201ENST00000304465 ARHGEF1Q92888 912 aaKnown RBP21.22■□□□□ 0.99
SRGAP2C-201ENST00000304465 CD2APQ9Y5K6 639 aa21.22■□□□□ 0.99
SRGAP2C-201ENST00000304465 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
SRGAP2C-201ENST00000304465 NLGN1Q8N2Q7 840 aa21.21■□□□□ 0.99
SRGAP2C-201ENST00000304465 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
SRGAP2C-201ENST00000304465 VSIG10Q8N0Z9 540 aa21.2■□□□□ 0.98
SRGAP2C-201ENST00000304465 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
SRGAP2C-201ENST00000304465 ADAMTS7Q9UKP4 1686 aa21.19■□□□□ 0.98
SRGAP2C-201ENST00000304465 MMP10P09238 476 aa21.19■□□□□ 0.98
SRGAP2C-201ENST00000304465 COL5A3P25940 1745 aaPredicted RBP21.19■□□□□ 0.98
SRGAP2C-201ENST00000304465 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
SRGAP2C-201ENST00000304465 CYP19A1P11511 503 aaPredicted RBP21.17■□□□□ 0.98
SRGAP2C-201ENST00000304465 INTS5Q6P9B9 1019 aaKnown RBP21.17■□□□□ 0.98
SRGAP2C-201ENST00000304465 ZNF790Q6PG37 636 aa21.17■□□□□ 0.98
SRGAP2C-201ENST00000304465 BTBD11A6QL63 1104 aa21.16■□□□□ 0.98
SRGAP2C-201ENST00000304465 STARD3NLO95772 234 aa21.16■□□□□ 0.98
SRGAP2C-201ENST00000304465 CEMIPQ8WUJ3 1361 aa21.16■□□□□ 0.98
SRGAP2C-201ENST00000304465 KCPQ6ZWJ8 1503 aa21.15■□□□□ 0.98
SRGAP2C-201ENST00000304465 GYS1P13807 737 aa21.15■□□□□ 0.98
SRGAP2C-201ENST00000304465 TJP1Q07157 1748 aa21.15■□□□□ 0.98
SRGAP2C-201ENST00000304465 HTATSF1O43719 755 aaKnown RBP21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 ZPR1O75312 459 aa21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 MCM10Q7L590 875 aa21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 FMNL2Q96PY5 1086 aa21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 TEX13AQ9BXU3 409 aaPredicted RBP21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 PARP3Q9Y6F1 533 aa21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 VIRMAQ69YN4 1812 aaKnown RBP21.14■□□□□ 0.98
SRGAP2C-201ENST00000304465 CICQ96RK0 1608 aaPredicted RBP21.14■□□□□ 0.97
SRGAP2C-201ENST00000304465 ZNF496Q96IT1 587 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms