RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
POLR1C-201ENST00000304004 LRRC4BQ9NT99 713 aa21.65■■□□□ 1.06
POLR1C-201ENST00000304004 TJP1Q07157 1748 aa21.64■■□□□ 1.06
POLR1C-201ENST00000304004 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
POLR1C-201ENST00000304004 PIGBQ92521 554 aa21.64■■□□□ 1.05
POLR1C-201ENST00000304004 ERVV-2B6SEH9 535 aa21.63■■□□□ 1.05
POLR1C-201ENST00000304004 STK32BQ9NY57 414 aa21.63■■□□□ 1.05
POLR1C-201ENST00000304004 MYBBP1AQ9BQG0 1328 aaKnown RBP21.62■■□□□ 1.05
POLR1C-201ENST00000304004 AKAP4Q5JQC9 854 aa21.62■■□□□ 1.05
POLR1C-201ENST00000304004 SMARCC1Q92922 1105 aaPredicted RBP21.62■■□□□ 1.05
POLR1C-201ENST00000304004 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
POLR1C-201ENST00000304004 CCNL1Q9UK58 526 aaPredicted RBP21.62■■□□□ 1.05
POLR1C-201ENST00000304004 MYH14Q7Z406 1995 aaKnown RBP21.6■■□□□ 1.05
POLR1C-201ENST00000304004 ZNF316A6NFI3 1004 aaPredicted RBP21.6■■□□□ 1.05
POLR1C-201ENST00000304004 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
POLR1C-201ENST00000304004 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
POLR1C-201ENST00000304004 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
POLR1C-201ENST00000304004 SLC15A2Q16348 729 aa21.6■■□□□ 1.05
POLR1C-201ENST00000304004 MTHFSDQ2M296 383 aaKnown RBP21.6■■□□□ 1.05
POLR1C-201ENST00000304004 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
POLR1C-201ENST00000304004 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
POLR1C-201ENST00000304004 KCNQ4P56696 695 aa21.58■■□□□ 1.05
POLR1C-201ENST00000304004 CABP4P57796 275 aa21.57■■□□□ 1.04
POLR1C-201ENST00000304004 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
POLR1C-201ENST00000304004 ASAP1Q9ULH1 1129 aa21.57■■□□□ 1.04
POLR1C-201ENST00000304004 C4AP0C0L4 1744 aa21.56■■□□□ 1.04
POLR1C-201ENST00000304004 FCHSD2O94868 740 aa21.56■■□□□ 1.04
POLR1C-201ENST00000304004 AKT1S1Q96B36 256 aa21.56■■□□□ 1.04
POLR1C-201ENST00000304004 PRKRIP1Q9H875 184 aaPredicted RBP21.55■■□□□ 1.04
POLR1C-201ENST00000304004 RNMTO43148 476 aaKnown RBP21.54■■□□□ 1.04
POLR1C-201ENST00000304004 ATG3Q9NT62 314 aa21.54■■□□□ 1.04
POLR1C-201ENST00000304004 LOC102724428A0A0B4J2F2 783 aa21.53■■□□□ 1.04
POLR1C-201ENST00000304004 HMGB2P26583 209 aaKnown RBP21.53■■□□□ 1.04
POLR1C-201ENST00000304004 SIK1P57059 783 aa21.53■■□□□ 1.04
POLR1C-201ENST00000304004 PHACTR3Q96KR7 559 aa21.53■■□□□ 1.04
POLR1C-201ENST00000304004 KCPQ6ZWJ8 1503 aa21.53■■□□□ 1.04
POLR1C-201ENST00000304004 GNAT3A8MTJ3 354 aa21.52■■□□□ 1.04
POLR1C-201ENST00000304004 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
POLR1C-201ENST00000304004 SLC52A2Q9HAB3 445 aa21.52■■□□□ 1.04
POLR1C-201ENST00000304004 KDM3BQ7LBC6 1761 aa21.51■■□□□ 1.03
POLR1C-201ENST00000304004 NFATC2IPQ8NCF5 419 aa21.51■■□□□ 1.03
POLR1C-201ENST00000304004 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
POLR1C-201ENST00000304004 PNPLA7Q6ZV29 1317 aa21.5■■□□□ 1.03
POLR1C-201ENST00000304004 CEMIPQ8WUJ3 1361 aa21.49■■□□□ 1.03
POLR1C-201ENST00000304004 TFCP2L1Q9NZI6 479 aa21.49■■□□□ 1.03
POLR1C-201ENST00000304004 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
POLR1C-201ENST00000304004 NEFMP07197 916 aa21.47■■□□□ 1.03
POLR1C-201ENST00000304004 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
POLR1C-201ENST00000304004 ITPK1Q13572 414 aa21.47■■□□□ 1.03
POLR1C-201ENST00000304004 LINC00116Q8NCU8 138 aa21.47■■□□□ 1.03
POLR1C-201ENST00000304004 SPON1Q9HCB6 807 aa21.47■■□□□ 1.03
POLR1C-201ENST00000304004 RBM42Q9BTD8 480 aaKnown RBP21.46■■□□□ 1.03
POLR1C-201ENST00000304004 ZBTB7AO95365 584 aa21.45■■□□□ 1.02
POLR1C-201ENST00000304004 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
POLR1C-201ENST00000304004 AK7Q96M32 723 aa21.45■■□□□ 1.02
POLR1C-201ENST00000304004 SLC4A9Q96Q91 983 aa21.45■■□□□ 1.02
POLR1C-201ENST00000304004 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
POLR1C-201ENST00000304004 TEFQ10587 303 aa21.44■■□□□ 1.02
POLR1C-201ENST00000304004 MTFR1LQ9H019 292 aa21.44■■□□□ 1.02
POLR1C-201ENST00000304004 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
POLR1C-201ENST00000304004 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
POLR1C-201ENST00000304004 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
POLR1C-201ENST00000304004 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
POLR1C-201ENST00000304004 ATF5Q9Y2D1 282 aaPredicted RBP21.42■■□□□ 1.02
POLR1C-201ENST00000304004 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
POLR1C-201ENST00000304004 WDR43Q15061 677 aaKnown RBP eCLIP21.41■■□□□ 1.02
POLR1C-201ENST00000304004 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
POLR1C-201ENST00000304004 HTATSF1O43719 755 aaKnown RBP21.4■■□□□ 1.02
POLR1C-201ENST00000304004 SLC39A6Q13433 755 aa21.4■■□□□ 1.02
POLR1C-201ENST00000304004 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
POLR1C-201ENST00000304004 FLAD1Q8NFF5 587 aa21.4■■□□□ 1.02
POLR1C-201ENST00000304004 GNPATO15228 680 aa21.39■■□□□ 1.01
POLR1C-201ENST00000304004 PTGER2P43116 358 aa21.39■■□□□ 1.01
POLR1C-201ENST00000304004 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.01
POLR1C-201ENST00000304004 COL23A1Q86Y22 540 aaPredicted RBP21.39■■□□□ 1.01
POLR1C-201ENST00000304004 SSFA2P28290 1259 aa21.38■■□□□ 1.01
POLR1C-201ENST00000304004 MCM10Q7L590 875 aa21.38■■□□□ 1.01
POLR1C-201ENST00000304004 RC3H1Q5TC82 1133 aaKnown RBP21.37■■□□□ 1.01
POLR1C-201ENST00000304004 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
POLR1C-201ENST00000304004 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
POLR1C-201ENST00000304004 PPP1R1BQ9UD71 204 aaPredicted RBP21.37■■□□□ 1.01
POLR1C-201ENST00000304004 SCN7AQ01118 1682 aa21.37■■□□□ 1.01
POLR1C-201ENST00000304004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.36■■□□□ 1.01
POLR1C-201ENST00000304004 PHF14O94880 888 aa21.36■■□□□ 1.01
POLR1C-201ENST00000304004 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
POLR1C-201ENST00000304004 ANP32CO43423 234 aa21.35■■□□□ 1.01
POLR1C-201ENST00000304004 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
POLR1C-201ENST00000304004 ZNF790Q6PG37 636 aa21.35■■□□□ 1.01
POLR1C-201ENST00000304004 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
POLR1C-201ENST00000304004 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
POLR1C-201ENST00000304004 CRKLP46109 303 aaKnown RBP21.34■■□□□ 1.01
POLR1C-201ENST00000304004 VSIG10Q8N0Z9 540 aa21.34■■□□□ 1.01
POLR1C-201ENST00000304004 BTBD11A6QL63 1104 aa21.33■■□□□ 1.01
POLR1C-201ENST00000304004 DNAJC10Q8IXB1 793 aa21.33■■□□□ 1.01
POLR1C-201ENST00000304004 CCDC146Q8IYE0 955 aa21.33■■□□□ 1.01
POLR1C-201ENST00000304004 RTCBQ9Y3I0 505 aaKnown RBP21.33■■□□□ 1.01
POLR1C-201ENST00000304004 SMIM5Q71RC9 77 aa21.32■■□□□ 1
POLR1C-201ENST00000304004 ZNF496Q96IT1 587 aaPredicted RBP21.32■■□□□ 1
POLR1C-201ENST00000304004 ADAMTS8Q9UP79 889 aa21.32■■□□□ 1
POLR1C-201ENST00000304004 RUNDC1Q96C34 613 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms