RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ASAP1Q9ULH1 1129 aa22.48■■□□□ 1.19
NDUFA3-201ENST00000303553 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
NDUFA3-201ENST00000303553 SIK1P57059 783 aa22.47■■□□□ 1.19
NDUFA3-201ENST00000303553 NFATC2IPQ8NCF5 419 aa22.47■■□□□ 1.19
NDUFA3-201ENST00000303553 ATG3Q9NT62 314 aa22.47■■□□□ 1.19
NDUFA3-201ENST00000303553 AKT1S1Q96B36 256 aa22.46■■□□□ 1.19
NDUFA3-201ENST00000303553 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
NDUFA3-201ENST00000303553 C4BP0C0L5 1744 aa22.45■■□□□ 1.19
NDUFA3-201ENST00000303553 KCNQ4P56696 695 aa22.45■■□□□ 1.18
NDUFA3-201ENST00000303553 ZNF827Q17R98 1081 aa22.45■■□□□ 1.18
NDUFA3-201ENST00000303553 LGR6Q9HBX8 967 aa22.45■■□□□ 1.18
NDUFA3-201ENST00000303553 MAPK8IP3Q9UPT6 1336 aa22.45■■□□□ 1.18
NDUFA3-201ENST00000303553 TUBGCP6Q96RT7 1819 aa22.45■■□□□ 1.18
NDUFA3-201ENST00000303553 WDR43Q15061 677 aaKnown RBP eCLIP22.44■■□□□ 1.18
NDUFA3-201ENST00000303553 TFCP2L1Q9NZI6 479 aa22.44■■□□□ 1.18
NDUFA3-201ENST00000303553 TEFQ10587 303 aa22.43■■□□□ 1.18
NDUFA3-201ENST00000303553 RTF1Q92541 710 aaKnown RBP22.43■■□□□ 1.18
NDUFA3-201ENST00000303553 SIPA1L3O60292 1781 aaPredicted RBP22.43■■□□□ 1.18
NDUFA3-201ENST00000303553 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
NDUFA3-201ENST00000303553 ANP32CO43423 234 aa22.42■■□□□ 1.18
NDUFA3-201ENST00000303553 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
NDUFA3-201ENST00000303553 HTATSF1O43719 755 aaKnown RBP22.41■■□□□ 1.18
NDUFA3-201ENST00000303553 RBM42Q9BTD8 480 aaKnown RBP22.41■■□□□ 1.18
NDUFA3-201ENST00000303553 DLG5Q8TDM6 1919 aa22.41■■□□□ 1.18
NDUFA3-201ENST00000303553 COL5A3P25940 1745 aaPredicted RBP22.4■■□□□ 1.18
NDUFA3-201ENST00000303553 CEMIPQ8WUJ3 1361 aa22.4■■□□□ 1.18
NDUFA3-201ENST00000303553 AK7Q96M32 723 aa22.4■■□□□ 1.18
NDUFA3-201ENST00000303553 PLEKHF1Q96S99 279 aa22.4■■□□□ 1.18
NDUFA3-201ENST00000303553 SPON1Q9HCB6 807 aa22.4■■□□□ 1.18
NDUFA3-201ENST00000303553 FLAD1Q8NFF5 587 aa22.39■■□□□ 1.17
NDUFA3-201ENST00000303553 UBR2Q8IWV8 1755 aa22.38■■□□□ 1.17
NDUFA3-201ENST00000303553 IL17REQ8NFR9 667 aa22.38■■□□□ 1.17
NDUFA3-201ENST00000303553 PNPLA7Q6ZV29 1317 aa22.37■■□□□ 1.17
NDUFA3-201ENST00000303553 UBR3Q6ZT12 1888 aa22.37■■□□□ 1.17
NDUFA3-201ENST00000303553 TTC5Q8N0Z6 440 aa22.37■■□□□ 1.17
NDUFA3-201ENST00000303553 SLC16A10Q8TF71 515 aa22.37■■□□□ 1.17
NDUFA3-201ENST00000303553 MTFR1LQ9H019 292 aa22.37■■□□□ 1.17
NDUFA3-201ENST00000303553 PTCD1O75127 700 aaKnown RBP22.36■■□□□ 1.17
NDUFA3-201ENST00000303553 LINC00116Q8NCU8 138 aa22.36■■□□□ 1.17
NDUFA3-201ENST00000303553 TJP1Q07157 1748 aa22.36■■□□□ 1.17
NDUFA3-201ENST00000303553 ITPK1Q13572 414 aa22.35■■□□□ 1.17
NDUFA3-201ENST00000303553 NFE2L2Q16236 605 aa22.35■■□□□ 1.17
NDUFA3-201ENST00000303553 KCPQ6ZWJ8 1503 aa22.35■■□□□ 1.17
NDUFA3-201ENST00000303553 PDGFDQ9GZP0 370 aaPredicted RBP22.34■■□□□ 1.17
NDUFA3-201ENST00000303553 CNTNAP4Q9C0A0 1308 aa22.33■■□□□ 1.17
NDUFA3-201ENST00000303553 ZBTB7AO95365 584 aa22.33■■□□□ 1.17
NDUFA3-201ENST00000303553 SSFA2P28290 1259 aa22.32■■□□□ 1.16
NDUFA3-201ENST00000303553 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
NDUFA3-201ENST00000303553 SLC39A6Q13433 755 aa22.32■■□□□ 1.16
NDUFA3-201ENST00000303553 MCM10Q7L590 875 aa22.32■■□□□ 1.16
NDUFA3-201ENST00000303553 VSIG10Q8N0Z9 540 aa22.32■■□□□ 1.16
NDUFA3-201ENST00000303553 SLC4A9Q96Q91 983 aa22.32■■□□□ 1.16
NDUFA3-201ENST00000303553 SRCAPQ6ZRS2 3230 aa22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 BTBD11A6QL63 1104 aa22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 GNPATO15228 680 aa22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 MSH5O43196 834 aa22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 RC3H1Q5TC82 1133 aaKnown RBP22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 ZNF790Q6PG37 636 aa22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 RUNDC1Q96C34 613 aa22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 PPP1R1BQ9UD71 204 aaPredicted RBP22.31■■□□□ 1.16
NDUFA3-201ENST00000303553 ADAMTS8Q9UP79 889 aa22.3■■□□□ 1.16
NDUFA3-201ENST00000303553 COL24A1Q17RW2 1714 aa22.3■■□□□ 1.16
NDUFA3-201ENST00000303553 COL23A1Q86Y22 540 aaPredicted RBP22.29■■□□□ 1.16
NDUFA3-201ENST00000303553 RTCBQ9Y3I0 505 aaKnown RBP22.29■■□□□ 1.16
NDUFA3-201ENST00000303553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.28■■□□□ 1.16
NDUFA3-201ENST00000303553 PHF14O94880 888 aa22.28■■□□□ 1.16
NDUFA3-201ENST00000303553 ADRA2BP18089 450 aa22.28■■□□□ 1.16
NDUFA3-201ENST00000303553 ATF5Q9Y2D1 282 aaPredicted RBP22.28■■□□□ 1.16
NDUFA3-201ENST00000303553 RIPK4P57078 832 aa22.27■■□□□ 1.16
NDUFA3-201ENST00000303553 DCTN1Q14203 1278 aa22.27■■□□□ 1.16
NDUFA3-201ENST00000303553 CCDC146Q8IYE0 955 aa22.27■■□□□ 1.16
NDUFA3-201ENST00000303553 PNISRQ8TF01 805 aaKnown RBP22.27■■□□□ 1.16
NDUFA3-201ENST00000303553 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
NDUFA3-201ENST00000303553 POLD1P28340 1107 aa22.26■■□□□ 1.15
NDUFA3-201ENST00000303553 TMPOP42166 694 aaKnown RBP22.26■■□□□ 1.15
NDUFA3-201ENST00000303553 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
NDUFA3-201ENST00000303553 TEX13AQ9BXU3 409 aaPredicted RBP22.26■■□□□ 1.15
NDUFA3-201ENST00000303553 HEG1Q9ULI3 1381 aa22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 MYH14Q7Z406 1995 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 PTGER2P43116 358 aa22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 CRKLP46109 303 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 DNAJC10Q8IXB1 793 aa22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
NDUFA3-201ENST00000303553 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
NDUFA3-201ENST00000303553 STARD3NLO95772 234 aa22.24■■□□□ 1.15
NDUFA3-201ENST00000303553 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
NDUFA3-201ENST00000303553 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
NDUFA3-201ENST00000303553 CCDC87Q9NVE4 849 aa22.23■■□□□ 1.15
NDUFA3-201ENST00000303553 C4AP0C0L4 1744 aa22.23■■□□□ 1.15
NDUFA3-201ENST00000303553 SGIP1Q9BQI5 828 aa22.22■■□□□ 1.15
NDUFA3-201ENST00000303553 CYP19A1P11511 503 aaPredicted RBP22.21■■□□□ 1.15
NDUFA3-201ENST00000303553 RFC4P35249 363 aa22.2■■□□□ 1.14
NDUFA3-201ENST00000303553 AMIGO3Q86WK7 504 aa22.2■■□□□ 1.14
NDUFA3-201ENST00000303553 ARXQ96QS3 562 aa22.2■■□□□ 1.14
NDUFA3-201ENST00000303553 NEUROD2Q15784 382 aa22.19■■□□□ 1.14
NDUFA3-201ENST00000303553 RRP7AQ9Y3A4 280 aaKnown RBP22.19■■□□□ 1.14
NDUFA3-201ENST00000303553 LAMB4A4D0S4 1761 aa22.19■■□□□ 1.14
NDUFA3-201ENST00000303553 CCDC184Q52MB2 194 aa22.18■■□□□ 1.14
NDUFA3-201ENST00000303553 INTS5Q6P9B9 1019 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms