RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 VIRMAQ69YN4 1812 aaKnown RBP13.39□□□□□ -0.27
CLP1-201ENST00000302731 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
CLP1-201ENST00000302731 SIPA1L3O60292 1781 aaPredicted RBP13.39□□□□□ -0.27
CLP1-201ENST00000302731 LTBP4Q8N2S1 1624 aa13.38□□□□□ -0.27
CLP1-201ENST00000302731 MEGF6O75095 1541 aa13.38□□□□□ -0.27
CLP1-201ENST00000302731 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
CLP1-201ENST00000302731 AHDC1Q5TGY3 1603 aaPredicted RBP13.38□□□□□ -0.27
CLP1-201ENST00000302731 COL5A2P05997 1499 aaPredicted RBP13.37□□□□□ -0.27
CLP1-201ENST00000302731 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
CLP1-201ENST00000302731 HSP90AB1P08238 724 aaKnown RBP13.37□□□□□ -0.27
CLP1-201ENST00000302731 PHKG2P15735 406 aa13.37□□□□□ -0.27
CLP1-201ENST00000302731 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
CLP1-201ENST00000302731 IFNL2Q8IZJ0 200 aa13.37□□□□□ -0.27
CLP1-201ENST00000302731 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
CLP1-201ENST00000302731 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
CLP1-201ENST00000302731 RGS3P49796 1198 aa13.36□□□□□ -0.27
CLP1-201ENST00000302731 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
CLP1-201ENST00000302731 SKAP1Q86WV1 359 aa13.36□□□□□ -0.27
CLP1-201ENST00000302731 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
CLP1-201ENST00000302731 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 MRC1P22897 1456 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 FLIIQ13045 1269 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 G2E3Q7L622 706 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 DCAF5Q96JK2 942 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
CLP1-201ENST00000302731 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
CLP1-201ENST00000302731 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
CLP1-201ENST00000302731 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
CLP1-201ENST00000302731 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.27
CLP1-201ENST00000302731 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.27
CLP1-201ENST00000302731 RPAP2Q8IXW5 612 aaPredicted RBP13.33□□□□□ -0.28
CLP1-201ENST00000302731 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
CLP1-201ENST00000302731 C8orf34Q49A92 452 aa13.32□□□□□ -0.28
CLP1-201ENST00000302731 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
CLP1-201ENST00000302731 CYP27B1O15528 508 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 KCNQ3O43525 872 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
CLP1-201ENST00000302731 NUCB1Q02818 461 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 SIRT2Q8IXJ6 389 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 ANKRD44Q8N8A2 993 aa13.31□□□□□ -0.28
CLP1-201ENST00000302731 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
CLP1-201ENST00000302731 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
CLP1-201ENST00000302731 IL2RBP14784 551 aa13.3□□□□□ -0.28
CLP1-201ENST00000302731 ANP32AP39687 249 aaKnown RBP13.3□□□□□ -0.28
CLP1-201ENST00000302731 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
CLP1-201ENST00000302731 F6X3S4 739 aa13.29□□□□□ -0.28
CLP1-201ENST00000302731 GNAI3P08754 354 aa13.29□□□□□ -0.28
CLP1-201ENST00000302731 EVA1CP58658 441 aa13.29□□□□□ -0.28
CLP1-201ENST00000302731 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
CLP1-201ENST00000302731 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
CLP1-201ENST00000302731 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
CLP1-201ENST00000302731 EIF2S2P20042 333 aaKnown RBP13.28□□□□□ -0.28
CLP1-201ENST00000302731 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 MEIS3Q99687 375 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 DCTPP1Q9H773 170 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 CEP85Q6P2H3 762 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
CLP1-201ENST00000302731 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
CLP1-201ENST00000302731 HMMRO75330 724 aa13.27□□□□□ -0.29
CLP1-201ENST00000302731 GNAI2P04899 355 aa13.27□□□□□ -0.29
CLP1-201ENST00000302731 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
CLP1-201ENST00000302731 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
CLP1-201ENST00000302731 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
CLP1-201ENST00000302731 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
CLP1-201ENST00000302731 CABP4P57796 275 aa13.25□□□□□ -0.29
CLP1-201ENST00000302731 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
CLP1-201ENST00000302731 DNAAF4Q8WXU2 420 aa13.25□□□□□ -0.29
CLP1-201ENST00000302731 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLP1-201ENST00000302731 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
CLP1-201ENST00000302731 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
CLP1-201ENST00000302731 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
CLP1-201ENST00000302731 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
CLP1-201ENST00000302731 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
CLP1-201ENST00000302731 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
CLP1-201ENST00000302731 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
CLP1-201ENST00000302731 TOM1O60784 492 aa13.24□□□□□ -0.29
CLP1-201ENST00000302731 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
CLP1-201ENST00000302731 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
CLP1-201ENST00000302731 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
CLP1-201ENST00000302731 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
CLP1-201ENST00000302731 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 BEND3Q5T5X7 828 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
CLP1-201ENST00000302731 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 ADCY9O60503 1353 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
CLP1-201ENST00000302731 C5P01031 1676 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms