RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 SSBP05455 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
ABR-202ENST00000302538 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
ABR-202ENST00000302538 CHMP5Q9NZZ3 219 aa15.49■□□□□ 0.07
ABR-202ENST00000302538 MAGEC2Q9UBF1 373 aaPredicted RBP15.49■□□□□ 0.07
ABR-202ENST00000302538 PDCP20941 246 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 NAT10Q9H0A0 1025 aaKnown RBP15.48■□□□□ 0.07
ABR-202ENST00000302538 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
ABR-202ENST00000302538 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 ANKRD18BA2A2Z9 1011 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
ABR-202ENST00000302538 SLC5A1P13866 664 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 ATF7IPQ6VMQ6 1270 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 LMTK3Q96Q04 1460 aa15.48■□□□□ 0.07
ABR-202ENST00000302538 ZNF396Q96N95 335 aaPredicted RBP15.47■□□□□ 0.07
ABR-202ENST00000302538 CEBPZQ03701 1054 aaKnown RBP15.47■□□□□ 0.07
ABR-202ENST00000302538 PDILTQ8N807 584 aa15.47■□□□□ 0.07
ABR-202ENST00000302538 NOL7Q9UMY1 257 aaKnown RBP15.47■□□□□ 0.07
ABR-202ENST00000302538 MINDY4BA8MYZ0 360 aa15.47■□□□□ 0.07
ABR-202ENST00000302538 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
ABR-202ENST00000302538 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
ABR-202ENST00000302538 NBPF5PQ86XG9 351 aaPredicted RBP15.46■□□□□ 0.07
ABR-202ENST00000302538 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
ABR-202ENST00000302538 PDZRN3Q9UPQ7 1066 aa15.46■□□□□ 0.07
ABR-202ENST00000302538 PPP1R42Q7Z4L9 355 aa15.46■□□□□ 0.06
ABR-202ENST00000302538 JMYQ8N9B5 988 aa15.46■□□□□ 0.06
ABR-202ENST00000302538 KINO60870 393 aaKnown RBP15.45■□□□□ 0.06
ABR-202ENST00000302538 DDB1Q16531 1140 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 RDXP35241 583 aaKnown RBP15.45■□□□□ 0.06
ABR-202ENST00000302538 ANKRD1Q15327 319 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 FEZ1Q99689 392 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 C11orf95C9JLR9 678 aaPredicted RBP15.45■□□□□ 0.06
ABR-202ENST00000302538 TNIP1Q15025 636 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 TMEM87AQ8NBN3 555 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
ABR-202ENST00000302538 CDKL5O76039 1030 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
ABR-202ENST00000302538 MYO1BO43795 1136 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
ABR-202ENST00000302538 ACEP12821 1306 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 PDE3AQ14432 1141 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 CCDC96Q2M329 555 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 IMMTQ16891 758 aaKnown RBP15.44■□□□□ 0.06
ABR-202ENST00000302538 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
ABR-202ENST00000302538 DNMT1P26358 1616 aaKnown RBP15.44■□□□□ 0.06
ABR-202ENST00000302538 ABCA8O94911 1581 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 CCDC173Q0VFZ6 552 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 MAP3K12Q12852 859 aa15.44■□□□□ 0.06
ABR-202ENST00000302538 CWC27Q6UX04 472 aaKnown RBP15.44■□□□□ 0.06
ABR-202ENST00000302538 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
ABR-202ENST00000302538 HYPKQ9NX55 129 aa15.43■□□□□ 0.06
ABR-202ENST00000302538 TFCP2L1Q9NZI6 479 aa15.43■□□□□ 0.06
ABR-202ENST00000302538 NCKAP5LQ9HCH0 1330 aa15.43■□□□□ 0.06
ABR-202ENST00000302538 ZNF444Q8N0Y2 327 aaPredicted RBP15.43■□□□□ 0.06
ABR-202ENST00000302538 BRPF1P55201 1214 aaPredicted RBP15.43■□□□□ 0.06
ABR-202ENST00000302538 ZCRB1Q8TBF4 217 aaKnown RBP15.43■□□□□ 0.06
ABR-202ENST00000302538 CHD1O14646 1710 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 MCM2P49736 904 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 TBX22Q9Y458 520 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 FILIP1LQ4L180 1135 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 BLOC1S2Q6QNY1 142 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
ABR-202ENST00000302538 ADGRL2O95490 1459 aa15.42■□□□□ 0.06
ABR-202ENST00000302538 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
ABR-202ENST00000302538 PIP4K2AP48426 406 aaPredicted RBP15.41■□□□□ 0.06
ABR-202ENST00000302538 TSHZ2Q9NRE2 1034 aa15.41■□□□□ 0.06
ABR-202ENST00000302538 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
ABR-202ENST00000302538 NAPBQ9H115 298 aa15.41■□□□□ 0.06
ABR-202ENST00000302538 GPS2Q13227 327 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 STIM1Q13586 685 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 LRRC59Q96AG4 307 aaKnown RBP15.4■□□□□ 0.06
ABR-202ENST00000302538 SETDB2Q96T68 719 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
ABR-202ENST00000302538 NSD2O96028 1365 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 EIF2AK4Q9P2K8 1649 aaKnown RBP15.4■□□□□ 0.06
ABR-202ENST00000302538 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
ABR-202ENST00000302538 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 DNAAF4Q8WXU2 420 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 EXOC6BQ9Y2D4 811 aa15.4■□□□□ 0.06
ABR-202ENST00000302538 TTC21BQ7Z4L5 1316 aa15.39■□□□□ 0.06
ABR-202ENST00000302538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.05
ABR-202ENST00000302538 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 MAPKBP1O60336 1514 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 LDHCP07864 332 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 RABEP1Q15276 862 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 CABLES1Q8TDN4 633 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 PRAG1Q86YV5 1406 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 TTLL5Q6EMB2 1281 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 CABP5Q9NP86 173 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 CUL5Q93034 780 aa15.39■□□□□ 0.05
ABR-202ENST00000302538 RANBP6O60518 1105 aaKnown RBP15.38■□□□□ 0.05
ABR-202ENST00000302538 TRIM21P19474 475 aaKnown RBP15.38■□□□□ 0.05
ABR-202ENST00000302538 KIF1BPQ96EK5 621 aa15.38■□□□□ 0.05
ABR-202ENST00000302538 FAM13BQ9NYF5 915 aa15.38■□□□□ 0.05
ABR-202ENST00000302538 WASF1Q92558 559 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms