RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SCN11AQ9UI33 1791 aa24.27■■□□□ 1.48
SPSB3-201ENST00000301717 GNAT3A8MTJ3 354 aa24.27■■□□□ 1.48
SPSB3-201ENST00000301717 ITPK1Q13572 414 aa24.27■■□□□ 1.48
SPSB3-201ENST00000301717 SMIM5Q71RC9 77 aa24.26■■□□□ 1.47
SPSB3-201ENST00000301717 PLEKHF1Q96S99 279 aa24.26■■□□□ 1.47
SPSB3-201ENST00000301717 RBM42Q9BTD8 480 aaKnown RBP24.26■■□□□ 1.47
SPSB3-201ENST00000301717 PTCD1O75127 700 aaKnown RBP24.25■■□□□ 1.47
SPSB3-201ENST00000301717 SLC39A6Q13433 755 aa24.25■■□□□ 1.47
SPSB3-201ENST00000301717 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
SPSB3-201ENST00000301717 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
SPSB3-201ENST00000301717 MRC1P22897 1456 aa24.24■■□□□ 1.47
SPSB3-201ENST00000301717 ZBTB7AO95365 584 aa24.24■■□□□ 1.47
SPSB3-201ENST00000301717 LINC00116Q8NCU8 138 aa24.24■■□□□ 1.47
SPSB3-201ENST00000301717 CASZ1Q86V15 1759 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 ATP6V1AP38606 617 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 DCTN1Q14203 1278 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 AMIGO3Q86WK7 504 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 PNPLA7Q6ZV29 1317 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 C5P01031 1676 aa24.23■■□□□ 1.47
SPSB3-201ENST00000301717 MCM10Q7L590 875 aa24.22■■□□□ 1.47
SPSB3-201ENST00000301717 CCDC146Q8IYE0 955 aa24.2■■□□□ 1.46
SPSB3-201ENST00000301717 TUBGCP6Q96RT7 1819 aa24.2■■□□□ 1.46
SPSB3-201ENST00000301717 ATF5Q9Y2D1 282 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-201ENST00000301717 VIRMAQ69YN4 1812 aaKnown RBP24.19■■□□□ 1.46
SPSB3-201ENST00000301717 TEFQ10587 303 aa24.18■■□□□ 1.46
SPSB3-201ENST00000301717 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
SPSB3-201ENST00000301717 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
SPSB3-201ENST00000301717 C4BP0C0L5 1744 aa24.17■■□□□ 1.46
SPSB3-201ENST00000301717 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
SPSB3-201ENST00000301717 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
SPSB3-201ENST00000301717 MAPK8IP3Q9UPT6 1336 aa24.16■■□□□ 1.46
SPSB3-201ENST00000301717 PHF14O94880 888 aa24.16■■□□□ 1.46
SPSB3-201ENST00000301717 COL23A1Q86Y22 540 aaPredicted RBP24.16■■□□□ 1.46
SPSB3-201ENST00000301717 RTF1Q92541 710 aaKnown RBP24.16■■□□□ 1.46
SPSB3-201ENST00000301717 AK7Q96M32 723 aa24.16■■□□□ 1.46
SPSB3-201ENST00000301717 LRP5O75197 1615 aa24.16■■□□□ 1.46
SPSB3-201ENST00000301717 MSH5O43196 834 aa24.15■■□□□ 1.46
SPSB3-201ENST00000301717 NEFMP07197 916 aa24.15■■□□□ 1.46
SPSB3-201ENST00000301717 NFE2L2Q16236 605 aa24.15■■□□□ 1.46
SPSB3-201ENST00000301717 THUMPD2Q9BTF0 503 aaKnown RBP24.15■■□□□ 1.46
SPSB3-201ENST00000301717 SPON1Q9HCB6 807 aa24.15■■□□□ 1.46
SPSB3-201ENST00000301717 ANP32CO43423 234 aa24.14■■□□□ 1.45
SPSB3-201ENST00000301717 KCNQ3O43525 872 aa24.14■■□□□ 1.45
SPSB3-201ENST00000301717 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
SPSB3-201ENST00000301717 KCPQ6ZWJ8 1503 aa24.14■■□□□ 1.45
SPSB3-201ENST00000301717 GNPATO15228 680 aa24.12■■□□□ 1.45
SPSB3-201ENST00000301717 DNAJC10Q8IXB1 793 aa24.12■■□□□ 1.45
SPSB3-201ENST00000301717 PTGER2P43116 358 aa24.11■■□□□ 1.45
SPSB3-201ENST00000301717 MTFR1LQ9H019 292 aa24.1■■□□□ 1.45
SPSB3-201ENST00000301717 PNNQ9H307 717 aaKnown RBP24.1■■□□□ 1.45
SPSB3-201ENST00000301717 SIPA1L3O60292 1781 aaPredicted RBP24.1■■□□□ 1.45
SPSB3-201ENST00000301717 TJP1Q07157 1748 aa24.1■■□□□ 1.45
SPSB3-201ENST00000301717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.1■■□□□ 1.45
SPSB3-201ENST00000301717 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
SPSB3-201ENST00000301717 MSL1Q68DK7 614 aa24.1■■□□□ 1.45
SPSB3-201ENST00000301717 ZNF790Q6PG37 636 aa24.1■■□□□ 1.45
SPSB3-201ENST00000301717 ZNF496Q96IT1 587 aaPredicted RBP24.1■■□□□ 1.45
SPSB3-201ENST00000301717 HTATSF1O43719 755 aaKnown RBP24.09■■□□□ 1.45
SPSB3-201ENST00000301717 NEUROD2Q15784 382 aa24.09■■□□□ 1.45
SPSB3-201ENST00000301717 TTC5Q8N0Z6 440 aa24.09■■□□□ 1.45
SPSB3-201ENST00000301717 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
SPSB3-201ENST00000301717 QSER1Q2KHR3 1735 aa24.09■■□□□ 1.45
SPSB3-201ENST00000301717 DLG5Q8TDM6 1919 aa24.08■■□□□ 1.45
SPSB3-201ENST00000301717 TMPOP42166 694 aaKnown RBP24.08■■□□□ 1.44
SPSB3-201ENST00000301717 RIPK4P57078 832 aa24.08■■□□□ 1.44
SPSB3-201ENST00000301717 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
SPSB3-201ENST00000301717 UBR3Q6ZT12 1888 aa24.07■■□□□ 1.44
SPSB3-201ENST00000301717 SENP3-EIF4A1A0A087X0R7 540 aa24.07■■□□□ 1.44
SPSB3-201ENST00000301717 CRKLP46109 303 aaKnown RBP24.07■■□□□ 1.44
SPSB3-201ENST00000301717 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
SPSB3-201ENST00000301717 SGIP1Q9BQI5 828 aa24.07■■□□□ 1.44
SPSB3-201ENST00000301717 ZNF831Q5JPB2 1677 aa24.06■■□□□ 1.44
SPSB3-201ENST00000301717 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
SPSB3-201ENST00000301717 CNTNAP4Q9C0A0 1308 aa24.06■■□□□ 1.44
SPSB3-201ENST00000301717 PPP1R1BQ9UD71 204 aaPredicted RBP24.05■■□□□ 1.44
SPSB3-201ENST00000301717 UBR2Q8IWV8 1755 aa24.05■■□□□ 1.44
SPSB3-201ENST00000301717 INTS5Q6P9B9 1019 aaKnown RBP24.04■■□□□ 1.44
SPSB3-201ENST00000301717 MYH14Q7Z406 1995 aaKnown RBP24.03■■□□□ 1.44
SPSB3-201ENST00000301717 PRAMEF22A3QJZ6 481 aa24.03■■□□□ 1.44
SPSB3-201ENST00000301717 CYP19A1P11511 503 aaPredicted RBP24.03■■□□□ 1.44
SPSB3-201ENST00000301717 SSFA2P28290 1259 aa24.03■■□□□ 1.44
SPSB3-201ENST00000301717 HEG1Q9ULI3 1381 aa24.03■■□□□ 1.44
SPSB3-201ENST00000301717 TAF7Q15545 349 aaPredicted RBP24.02■■□□□ 1.44
SPSB3-201ENST00000301717 RC3H1Q5TC82 1133 aaKnown RBP24.02■■□□□ 1.44
SPSB3-201ENST00000301717 SLC16A10Q8TF71 515 aa24.02■■□□□ 1.44
SPSB3-201ENST00000301717 RTCBQ9Y3I0 505 aaKnown RBP24.02■■□□□ 1.44
SPSB3-201ENST00000301717 FLAD1Q8NFF5 587 aa24.01■■□□□ 1.43
SPSB3-201ENST00000301717 CICQ96RK0 1608 aaPredicted RBP24.01■■□□□ 1.43
SPSB3-201ENST00000301717 RPS6KA4O75676 772 aa24.01■■□□□ 1.43
SPSB3-201ENST00000301717 PNISRQ8TF01 805 aaKnown RBP24.01■■□□□ 1.43
SPSB3-201ENST00000301717 ARHGEF1Q92888 912 aaKnown RBP24.01■■□□□ 1.43
SPSB3-201ENST00000301717 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
SPSB3-201ENST00000301717 ZBTB1Q9Y2K1 713 aa24.01■■□□□ 1.43
SPSB3-201ENST00000301717 APAF1O14727 1248 aa24■■□□□ 1.43
SPSB3-201ENST00000301717 HMGB2P26583 209 aaKnown RBP24■■□□□ 1.43
SPSB3-201ENST00000301717 VSIG10Q8N0Z9 540 aa24■■□□□ 1.43
SPSB3-201ENST00000301717 CCDC87Q9NVE4 849 aa24■■□□□ 1.43
SPSB3-201ENST00000301717 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
SPSB3-201ENST00000301717 TRAPPC3LQ5T215 181 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms