RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CCDC30Q5VVM6 783 aa15.88■□□□□ 0.13
HIF3A-204ENST00000300862 ARHGAP23Q9P227 1491 aa15.88■□□□□ 0.13
HIF3A-204ENST00000300862 SLIT1O75093 1534 aa15.88■□□□□ 0.13
HIF3A-204ENST00000300862 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
HIF3A-204ENST00000300862 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
HIF3A-204ENST00000300862 LRRFIP2Q9Y608 721 aaKnown RBP15.86■□□□□ 0.13
HIF3A-204ENST00000300862 PKP1Q13835 747 aa15.86■□□□□ 0.13
HIF3A-204ENST00000300862 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
HIF3A-204ENST00000300862 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
HIF3A-204ENST00000300862 MAP3K5Q99683 1374 aa15.85■□□□□ 0.13
HIF3A-204ENST00000300862 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
HIF3A-204ENST00000300862 CLCN1P35523 988 aa15.85■□□□□ 0.13
HIF3A-204ENST00000300862 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
HIF3A-204ENST00000300862 ERC2O15083 957 aa15.84■□□□□ 0.13
HIF3A-204ENST00000300862 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
HIF3A-204ENST00000300862 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
HIF3A-204ENST00000300862 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
HIF3A-204ENST00000300862 HDGFL1Q5TGJ6 251 aa15.84■□□□□ 0.13
HIF3A-204ENST00000300862 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
HIF3A-204ENST00000300862 REC8O95072 547 aa15.83■□□□□ 0.13
HIF3A-204ENST00000300862 GNAI3P08754 354 aa15.83■□□□□ 0.13
HIF3A-204ENST00000300862 RILPL2Q969X0 211 aa15.83■□□□□ 0.13
HIF3A-204ENST00000300862 ATP8B2P98198 1209 aa15.83■□□□□ 0.12
HIF3A-204ENST00000300862 USP44Q9H0E7 712 aa15.83■□□□□ 0.12
HIF3A-204ENST00000300862 GRPEL1Q9HAV7 217 aa15.83■□□□□ 0.12
HIF3A-204ENST00000300862 LGR6Q9HBX8 967 aa15.83■□□□□ 0.12
HIF3A-204ENST00000300862 IL1RAPL2Q9NP60 686 aa15.83■□□□□ 0.12
HIF3A-204ENST00000300862 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 BAG4O95429 457 aaKnown RBP15.82■□□□□ 0.12
HIF3A-204ENST00000300862 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 NBPF6Q5VWK0 638 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 NBPF4Q96M43 638 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 OSBPL3Q9H4L5 887 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 MX1P20591 662 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 MRE11P49959 708 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 KCNQ3O43525 872 aa15.82■□□□□ 0.12
HIF3A-204ENST00000300862 NAP1L5Q96NT1 182 aaPredicted RBP15.82■□□□□ 0.12
HIF3A-204ENST00000300862 ANXA1P04083 346 aa15.81■□□□□ 0.12
HIF3A-204ENST00000300862 UNC5CLQ8IV45 518 aa15.81■□□□□ 0.12
HIF3A-204ENST00000300862 ST18O60284 1047 aa15.81■□□□□ 0.12
HIF3A-204ENST00000300862 UBTFL1P0CB47 393 aaPredicted RBP15.81■□□□□ 0.12
HIF3A-204ENST00000300862 XPCQ01831 940 aaPredicted RBP15.81■□□□□ 0.12
HIF3A-204ENST00000300862 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
HIF3A-204ENST00000300862 CHAMP1Q96JM3 812 aa15.81■□□□□ 0.12
HIF3A-204ENST00000300862 SALL3Q9BXA9 1300 aa15.8■□□□□ 0.12
HIF3A-204ENST00000300862 ANKARQ7Z5J8 1434 aa15.8■□□□□ 0.12
HIF3A-204ENST00000300862 MCTP1Q6DN14 999 aa15.8■□□□□ 0.12
HIF3A-204ENST00000300862 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
HIF3A-204ENST00000300862 NUTM1Q86Y26 1132 aa15.8■□□□□ 0.12
HIF3A-204ENST00000300862 NEK4P51957 841 aa15.79■□□□□ 0.12
HIF3A-204ENST00000300862 FOXD4L5Q5VV16 416 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 FOXD4L4Q8WXT5 416 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 PALD1Q9ULE6 856 aa15.79■□□□□ 0.12
HIF3A-204ENST00000300862 DDX49Q9Y6V7 483 aaKnown RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 XRN1Q8IZH2 1706 aaKnown RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 MAP4K4O95819 1239 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-204ENST00000300862 PSME1Q06323 249 aa15.79■□□□□ 0.12
HIF3A-204ENST00000300862 ESYT1Q9BSJ8 1104 aa15.79■□□□□ 0.12
HIF3A-204ENST00000300862 FER1L4A9Z1Z3 1794 aa15.78■□□□□ 0.12
HIF3A-204ENST00000300862 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
HIF3A-204ENST00000300862 ERBB4Q15303 1308 aa15.78■□□□□ 0.12
HIF3A-204ENST00000300862 GOLGA6L22H0YM25 854 aa15.78■□□□□ 0.12
HIF3A-204ENST00000300862 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
HIF3A-204ENST00000300862 IP6K1Q92551 441 aa15.78■□□□□ 0.12
HIF3A-204ENST00000300862 ANO2Q9NQ90 1003 aa15.78■□□□□ 0.12
HIF3A-204ENST00000300862 CHPF2Q9P2E5 772 aa15.78■□□□□ 0.12
HIF3A-204ENST00000300862 SURF6O75683 361 aaKnown RBP15.77■□□□□ 0.12
HIF3A-204ENST00000300862 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.12
HIF3A-204ENST00000300862 NCLP19338 710 aaKnown RBP15.77■□□□□ 0.12
HIF3A-204ENST00000300862 CHMLP26374 656 aa15.77■□□□□ 0.12
HIF3A-204ENST00000300862 MPRIPQ6WCQ1 1025 aa15.77■□□□□ 0.12
HIF3A-204ENST00000300862 PPP1R42Q7Z4L9 355 aa15.77■□□□□ 0.12
HIF3A-204ENST00000300862 FAM208AQ9UK61 1670 aaKnown RBP15.77■□□□□ 0.11
HIF3A-204ENST00000300862 IL25Q9H293 177 aa15.77■□□□□ 0.11
HIF3A-204ENST00000300862 LRRC37A3O60309 1634 aa15.77■□□□□ 0.11
HIF3A-204ENST00000300862 EIF4A1P60842 406 aaKnown RBP15.76■□□□□ 0.11
HIF3A-204ENST00000300862 NUCB2P80303 420 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 LMOD2Q6P5Q4 547 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 PI4KAP2A4QPH2 592 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
HIF3A-204ENST00000300862 CLEC17AQ6ZS10 378 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 PI4KAP1Q8N8J0 262 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 ZDHHC9Q9Y397 364 aa15.76■□□□□ 0.11
HIF3A-204ENST00000300862 SRGAP3O43295 1099 aa15.75■□□□□ 0.11
HIF3A-204ENST00000300862 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
HIF3A-204ENST00000300862 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
HIF3A-204ENST00000300862 SSH3Q8TE77 659 aa15.74■□□□□ 0.11
HIF3A-204ENST00000300862 TMX3Q96JJ7 454 aa15.74■□□□□ 0.11
HIF3A-204ENST00000300862 UPF3BQ9BZI7 483 aaKnown RBP15.74■□□□□ 0.11
HIF3A-204ENST00000300862 SOS1Q07889 1333 aaPredicted RBP15.74■□□□□ 0.11
HIF3A-204ENST00000300862 TEFQ10587 303 aa15.74■□□□□ 0.11
HIF3A-204ENST00000300862 BABAM1Q9NWV8 329 aa15.74■□□□□ 0.11
HIF3A-204ENST00000300862 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
HIF3A-204ENST00000300862 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 PTMSP20962 102 aa15.73■□□□□ 0.11
HIF3A-204ENST00000300862 KLHL40Q2TBA0 621 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms