RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 PLCH2O75038 1416 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 UBE2HP62256 183 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
SNX20-201ENST00000300590 MSH6P52701 1360 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 TCHHQ07283 1943 aa13.17□□□□□ -0.3
SNX20-201ENST00000300590 HMMRO75330 724 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 SYT1P21579 422 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 IL1RAPL2Q9NP60 686 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
SNX20-201ENST00000300590 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
SNX20-201ENST00000300590 IL25Q9H293 177 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 STX6O43752 255 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 CHMLP26374 656 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 MCM10Q7L590 875 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 NECTIN2Q92692 538 aa13.16□□□□□ -0.3
SNX20-201ENST00000300590 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
SNX20-201ENST00000300590 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
SNX20-201ENST00000300590 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
SNX20-201ENST00000300590 RTL1A6NKG5 1358 aa13.15□□□□□ -0.31
SNX20-201ENST00000300590 CCDC112Q8NEF3 446 aa13.15□□□□□ -0.31
SNX20-201ENST00000300590 FEZ1Q99689 392 aa13.15□□□□□ -0.31
SNX20-201ENST00000300590 MYOM2P54296 1465 aa13.14□□□□□ -0.31
SNX20-201ENST00000300590 CTNNA3Q9UI47 895 aa13.14□□□□□ -0.31
SNX20-201ENST00000300590 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
SNX20-201ENST00000300590 CCDC83Q8IWF9 413 aa13.14□□□□□ -0.31
SNX20-201ENST00000300590 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
SNX20-201ENST00000300590 CCDC192P0DO97 292 aa13.13□□□□□ -0.31
SNX20-201ENST00000300590 G2E3Q7L622 706 aa13.13□□□□□ -0.31
SNX20-201ENST00000300590 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
SNX20-201ENST00000300590 CTIFO43310 598 aaKnown RBP13.13□□□□□ -0.31
SNX20-201ENST00000300590 F13A1P00488 732 aa13.13□□□□□ -0.31
SNX20-201ENST00000300590 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
SNX20-201ENST00000300590 SOX12O15370 315 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 AK2P54819 239 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
SNX20-201ENST00000300590 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
SNX20-201ENST00000300590 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
SNX20-201ENST00000300590 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
SNX20-201ENST00000300590 SPG7Q9UQ90 795 aa13.11□□□□□ -0.31
SNX20-201ENST00000300590 LARGE1O95461 756 aa13.11□□□□□ -0.31
SNX20-201ENST00000300590 GJB2P29033 226 aa13.11□□□□□ -0.31
SNX20-201ENST00000300590 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
SNX20-201ENST00000300590 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
SNX20-201ENST00000300590 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
SNX20-201ENST00000300590 KIAA1210Q9ULL0 1709 aa13.11□□□□□ -0.31
SNX20-201ENST00000300590 PNMA6EA0A0J9YXQ4 647 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 TPM3P06753 285 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 NECAB1Q8N987 351 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 FUCA2Q9BTY2 467 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 ANO6Q4KMQ2 910 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
SNX20-201ENST00000300590 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 TULP4Q9NRJ4 1543 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 LIG1P18858 919 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 ANAPC15P60006 121 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 NME9Q86XW9 330 aa13.1□□□□□ -0.31
SNX20-201ENST00000300590 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
SNX20-201ENST00000300590 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
SNX20-201ENST00000300590 TYRO3Q06418 890 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 CWC27Q6UX04 472 aaKnown RBP13.09□□□□□ -0.31
SNX20-201ENST00000300590 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
SNX20-201ENST00000300590 ARID5BQ14865 1188 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
SNX20-201ENST00000300590 FAM135BQ49AJ0 1406 aa13.09□□□□□ -0.31
SNX20-201ENST00000300590 GNAI2P04899 355 aa13.08□□□□□ -0.31
SNX20-201ENST00000300590 MAP3K11Q16584 847 aa13.08□□□□□ -0.31
SNX20-201ENST00000300590 KIF18AQ8NI77 898 aa13.08□□□□□ -0.31
SNX20-201ENST00000300590 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.31
SNX20-201ENST00000300590 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.31
SNX20-201ENST00000300590 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 RGS12O14924 1447 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 IL13P35225 146 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 TERF2Q15554 542 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
SNX20-201ENST00000300590 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 TNMDQ9H2S6 317 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
SNX20-201ENST00000300590 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.32
SNX20-201ENST00000300590 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms