RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 LRRC37A3O60309 1634 aa16.77■□□□□ 0.27
BCCIP-202ENST00000299130 KCNA6P17658 529 aa16.76■□□□□ 0.27
BCCIP-202ENST00000299130 CASC1Q6TDU7 716 aa16.76■□□□□ 0.27
BCCIP-202ENST00000299130 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
BCCIP-202ENST00000299130 SALL3Q9BXA9 1300 aa16.76■□□□□ 0.27
BCCIP-202ENST00000299130 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
BCCIP-202ENST00000299130 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
BCCIP-202ENST00000299130 ERC2O15083 957 aa16.75■□□□□ 0.27
BCCIP-202ENST00000299130 CCDC30Q5VVM6 783 aa16.75■□□□□ 0.27
BCCIP-202ENST00000299130 SKOR2Q2VWA4 1001 aaPredicted RBP16.75■□□□□ 0.27
BCCIP-202ENST00000299130 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
BCCIP-202ENST00000299130 EIF5BO60841 1220 aaKnown RBP16.74■□□□□ 0.27
BCCIP-202ENST00000299130 REC8O95072 547 aa16.74■□□□□ 0.27
BCCIP-202ENST00000299130 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
BCCIP-202ENST00000299130 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
BCCIP-202ENST00000299130 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
BCCIP-202ENST00000299130 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
BCCIP-202ENST00000299130 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
BCCIP-202ENST00000299130 PHAXQ9H814 394 aaKnown RBP16.73■□□□□ 0.27
BCCIP-202ENST00000299130 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
BCCIP-202ENST00000299130 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
BCCIP-202ENST00000299130 TAF7Q15545 349 aaPredicted RBP16.72■□□□□ 0.27
BCCIP-202ENST00000299130 CHAMP1Q96JM3 812 aa16.72■□□□□ 0.27
BCCIP-202ENST00000299130 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
BCCIP-202ENST00000299130 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
BCCIP-202ENST00000299130 GNAI3P08754 354 aa16.71■□□□□ 0.27
BCCIP-202ENST00000299130 MX1P20591 662 aa16.71■□□□□ 0.27
BCCIP-202ENST00000299130 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
BCCIP-202ENST00000299130 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
BCCIP-202ENST00000299130 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.27
BCCIP-202ENST00000299130 ZDHHC9Q9Y397 364 aa16.71■□□□□ 0.27
BCCIP-202ENST00000299130 IBTKQ9P2D0 1353 aaPredicted RBP16.71■□□□□ 0.27
BCCIP-202ENST00000299130 ST18O60284 1047 aa16.71■□□□□ 0.27
BCCIP-202ENST00000299130 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
BCCIP-202ENST00000299130 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
BCCIP-202ENST00000299130 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
BCCIP-202ENST00000299130 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
BCCIP-202ENST00000299130 ISY1Q9ULR0 285 aaKnown RBP16.7■□□□□ 0.26
BCCIP-202ENST00000299130 PTMSP20962 102 aa16.7■□□□□ 0.26
BCCIP-202ENST00000299130 RILPL2Q969X0 211 aa16.7■□□□□ 0.26
BCCIP-202ENST00000299130 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
BCCIP-202ENST00000299130 NUCB2P80303 420 aa16.69■□□□□ 0.26
BCCIP-202ENST00000299130 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
BCCIP-202ENST00000299130 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
BCCIP-202ENST00000299130 IL1RAPL2Q9NP60 686 aa16.69■□□□□ 0.26
BCCIP-202ENST00000299130 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
BCCIP-202ENST00000299130 TRIM6-TRIM34B2RNG4 842 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 CHMLP26374 656 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 NEK4P51957 841 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 IL25Q9H293 177 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
BCCIP-202ENST00000299130 KCNQ3O43525 872 aa16.67■□□□□ 0.26
BCCIP-202ENST00000299130 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
BCCIP-202ENST00000299130 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
BCCIP-202ENST00000299130 FER1L4A9Z1Z3 1794 aa16.67■□□□□ 0.26
BCCIP-202ENST00000299130 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
BCCIP-202ENST00000299130 FOXD4L5Q5VV16 416 aaPredicted RBP16.67■□□□□ 0.26
BCCIP-202ENST00000299130 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
BCCIP-202ENST00000299130 NUTM1Q86Y26 1132 aa16.67■□□□□ 0.26
BCCIP-202ENST00000299130 FOXD4L4Q8WXT5 416 aaPredicted RBP16.67■□□□□ 0.26
BCCIP-202ENST00000299130 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
BCCIP-202ENST00000299130 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
BCCIP-202ENST00000299130 STAP2Q9UGK3 403 aa16.66■□□□□ 0.26
BCCIP-202ENST00000299130 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
BCCIP-202ENST00000299130 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
BCCIP-202ENST00000299130 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
BCCIP-202ENST00000299130 SETD1BQ9UPS6 1966 aaKnown RBP16.65■□□□□ 0.26
BCCIP-202ENST00000299130 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
BCCIP-202ENST00000299130 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
BCCIP-202ENST00000299130 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
BCCIP-202ENST00000299130 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
BCCIP-202ENST00000299130 LTN1O94822 1766 aa16.65■□□□□ 0.26
BCCIP-202ENST00000299130 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
BCCIP-202ENST00000299130 ANXA1P04083 346 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 PPP1R42Q7Z4L9 355 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
BCCIP-202ENST00000299130 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
BCCIP-202ENST00000299130 CLCN1P35523 988 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
BCCIP-202ENST00000299130 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
BCCIP-202ENST00000299130 PXDNLA1KZ92 1463 aa16.63■□□□□ 0.25
BCCIP-202ENST00000299130 CEMIPQ8WUJ3 1361 aa16.63■□□□□ 0.25
BCCIP-202ENST00000299130 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
BCCIP-202ENST00000299130 CHPF2Q9P2E5 772 aa16.63■□□□□ 0.25
BCCIP-202ENST00000299130 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
BCCIP-202ENST00000299130 IP6K1Q92551 441 aa16.63■□□□□ 0.25
BCCIP-202ENST00000299130 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
BCCIP-202ENST00000299130 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
BCCIP-202ENST00000299130 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
BCCIP-202ENST00000299130 LRRC59Q96AG4 307 aaKnown RBP16.62■□□□□ 0.25
BCCIP-202ENST00000299130 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
BCCIP-202ENST00000299130 POLA2Q14181 598 aa16.62■□□□□ 0.25
BCCIP-202ENST00000299130 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
BCCIP-202ENST00000299130 NSFL1CQ9UNZ2 370 aaKnown RBP16.62■□□□□ 0.25
BCCIP-202ENST00000299130 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms